m i c r o b i o l o g y...

42
M I C R O B I O L O G Y MIKROBIOLOGI YUSRON SUGIARTO LESSON 1

Upload: others

Post on 25-Sep-2019

7 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

M I C R O B I O L O G YWITH DISEASES BY BODY SYSTEM SECOND EDITIONMIKROBIOLOGI

YUSRON SUGIARTOLESSON 1

Page 2: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

NO MATERI

1 PENDAHULUAN

2 PROKARIOTIK

3 EUKARIOTIK

4 VIRUS

5 TEKNIK ISOLASI

6 PERHITUNGAN MIKROBA

7 IDENTIFIKASI MIKROBA

MATERI SEBELUM UTS

Page 3: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

REFERENCES

Page 4: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

Microorganisms were the first life on earthMicroorganisms created the biosphere that allowed multicellular organisms to evolveMulticellular organisms evolved from microorganisms>50% of the biomass on earth is comprised of microorganismsMicroorganisms will be on earth forever

WHY STUDY MICROBIOLOGY?

Page 5: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

•Our understanding of life has arisen largely from studies of microorganisms (biochemistry and genetics)•Studies of microorganisms continue to contribute to fundamental knowledge of life processes•We still know very little about the microorganisms that are present on Earth

WHY STUDY MICROBIOLOGY?

Page 6: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

WHY STUDY MICROBIOLOGY?

Health

Agriculture

Food

Environment

Page 7: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

•The science of microorganisms (very small, unicellular organisms)•The discipline is just over a century old•Has given rise to molecular biology and biotechnology

WHAT IS MICROBIOLOGY?

Page 8: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE MICROBIAL WORLD

•Microorganisms are everywhere: air, soil, water, plants, animals

Microbial life is diverseBacteria have existed for 3x109 yearsEvolved to flourish in the most inhospitable environments

Page 9: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

WHAT ARE MICROBES?

Page 10: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

EVOLUTIONARY TIME LINE

Page 11: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

BASIC STRUCTURE OF CELLS AND VIRUSES

(a) Comparison of a prokaryotic cell and a eukaryotic cell.

(b) Two examples of viruses.

Page 12: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

Carolus Linnaeus (Swedish) developed taxonomic system for naming plants and animals and grouping similar organisms together

Leeuwenhoek’s microorganisms grouped into six categories as follows:

FungiProtozoaAlgaeBacteriaArchaeaSmall Animal

Page 13: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE SIX BASIC TYPES OF MICROORGANISMS

Page 14: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE SIZES OF THE SMALLEST ORGANISMS AND OBJECTS

Page 15: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• Eukaryotic (have membrane-bound nucleus)

• Obtain food from other organisms

• Possess cell walls• Composed of

• Molds – multicellular; have hyphae; reproduce by sexual and asexual spores

• Yeasts – unicellular; reproduce asexually by budding; some produce sexual spores

FUNGI

Page 16: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• Single-celled eukaryotes• Similar to animals in nutrient needs

and cellular structure• Live freely in water; some live in

animal hosts• Asexual (most) and sexual

reproduction• Most are capable of locomotion by

• Pseudopodia – cell extensions that flow in direction of travel

• Cilia – numerous, short, hairlike protrusions that propel organisms through environment

• Flagella – extensions of a cell that are fewer, longer, and more whiplike than cilia

Page 17: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• Unicellular or multicellular• Photosynthetic• Simple reproductive

structures• Categorized on the basis of

pigmentation, storage products, and composition of cell wall

ALGAE

Page 18: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• Unicellular and lack nuclei• Much smaller than eukaryotes• Found everywhere there is

sufficient moisture; some found in extreme environments

• Reproduce asexually• Two kinds

• Bacteria – cell walls contain peptidoglycan; some lack cell walls; most do not cause disease and some are beneficial

• Archaea – cell walls composed of polymers other than peptidoglycan

BACTERIA AND ARCHAEA

Page 19: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE SCOPE OF MICROBIOLOGY

• Microbiology: The study of living things too small to be seen without magnification

• Microorganisms or microbes- these microscopic organisms

• Commonly called “germs, viruses, agents…” but not all cause disease and many more are useful or essential for human life

Page 20: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE GOLDEN AGE OF MICROBIOLOGY

Antoni van LeeuwenhoekInventor of the first microscope (1684)

Page 21: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

THE GOLDEN AGE OF MICROBIOLOGY

• Redi’s Experiments

• When decaying meat was kept isolated from flies, maggots never developed

• Meat exposed to flies was soon infested

• As a result, scientists began to doubt Aristotle’s theory

Page 22: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Golden Age of Microbiology

• Pasteur’s Experiments

• When the “swan-necked flasks” remained upright, no microbial growth appeared

• When the flask was tilted, dust from the bend in the neck seeped back into the flask and made the infusion cloudy with microbes within a day

THE GOLDEN AGE OF MICROBIOLOGY

Page 23: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

Germ Theory of Disease

•Proof that microorganisms caused disease•Robert Koch demonstrated that anthrax was caused by Bacillus anthracis• Blood from a diseased animal caused disease in a

healthy animal • Cultivated the disease causing agent outside the animal’s

body, then introduced the agent into a healthy animal which subsequently developed the disease

THE GOLDEN AGE OF MICROBIOLOGY

Page 24: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi
Page 25: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi
Page 26: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi
Page 27: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi
Page 28: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Golden Age of MicrobiologyTHE GOLDEN AGE OF MICROBIOLOGY

Page 29: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Golden Age of Microbiology

Page 30: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Golden Age of Microbiology

Page 31: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Golden Age of Microbiology

• How Can We Prevent Infection and Disease?• Semmelweis and

handwashing• Lister’s antiseptic technique• Nightingale and nursing• Snow – infection control and

epidemiology• Jenner’s vaccine – field of

immunology• Ehrlich’s “magic bullets” –

field of chemotherapy

Page 32: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi
Page 33: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Modern Age of Microbiology

Page 34: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Modern Age of Microbiology

• What Are the Basic Chemical Reactions of Life? • Biochemistry

• Began with Pasteur’s work on fermentation and Buchner’s discovery of enzymes in yeast extract

• Kluyver and van Niel –microbes used as model systems for biochemical reactions

• Practical applications• Design of herbicides

and pesticides• Diagnosis of illnesses

and monitoring of patients’ responses to treatment

• Treatment of metabolic diseases

• Drug design

Page 35: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

The Modern Age of Microbiology

•How Do Genes Work?• Microbial genetics• Molecular biology• Recombinant DNA

technology• Gene therapy

Page 36: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• Recombinant DNA Technology

• Genes in microbes, plants, and animals manipulated for practical applications

• Production of human blood-clotting factor by E. coli to aid hemophiliacs

• Gene Therapy

• Inserting a missing gene or repairing a defective one in humans by inserting desired gene into host cells

Page 37: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• What Role Do Microorganisms Play in the Environment?

• Bioremediation uses living bacteria, fungi, and algae to detoxify polluted environments

• Recycling of chemicals such as carbon, nitrogen, and sulfur

Page 38: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

• How Do We Defend Against Disease?• Serology

• The study of blood serum• Von Behring and Kitasato

– existence in the blood of chemicals and cells that fight infection

• Immunology• The study of the body’s

defense against specific pathogens

• Chemotherapy• Fleming discovered

penicillin• Domagk discovered sulfa

drugs

Page 39: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

What Will the Future Hold?

• Microbiology is built on asking and answering questions

• The more questions we answer, the more questions we have

Page 40: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

WORLDWIDE INFECTIOUS DISEASES AFFECTING HEALTH SCIENCES

• Increasing number of drug resistant strains including Nosocomial and Community Acquired microorganisms

• MRSA Methicillin Resistant Staphylococcus aureus

• VREVancomycin Resistant

Enterococcus• VRSA

Vancomycin Resistant Staphylococcus aureus

• MDR-TB Multidrug Resistant Tuberculosis

Page 41: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

Worldwide Infectious Diseases Affecting Health Sciences

• Increasing number of emerging diseases (SARS, AIDS, hepatitis C, viral encephalitis)

• Other diseases previously not linked to microorganisms now are (gastric ulcers, certain cancers, multiple sclerosis)

Page 42: M I C R O B I O L O G Y MIKROBIOLOGIyusronsugiarto.lecture.ub.ac.id/files/2015/07/1.-PERTEMUAN-1-2015.pdf · no materi 1 pendahuluan 2 prokariotik 3 eukariotik 4 virus 5 teknik isolasi

M I C R O B I O L O G YWITH DISEASES BY BODY SYSTEM SECOND EDITIONTHANK YOU

YUSRON SUGIARTOPERTEMUAN 1