magi cdb mango genetic stocks identification and characterisation database

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MAGICdb Mango Genetic stocks Identification and Characterisation database By A.Dineshwaran BTI-09-030 TNAU Genomics - http://www.tnaugenomics.com/mango/

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Page 1: Magi cdb  mango genetic stocks identification and characterisation database

MAGICdb Mango Genetic stocks Identification and Characterisation database

ByA.Dineshwaran

BTI-09-030

TNAU Genomics - http://www.tnaugenomics.com/mango/

Page 2: Magi cdb  mango genetic stocks identification and characterisation database

Introduction

• All the available resources on Mango, Mangifera indica provides only the general information and agricultural practices (Mango Resources Information System , RainForest Database ) .

• Providing morphological and fruit quality information of each mango varieties to various stake holders of industry is essential in the current information era

• With a view to integrate various resources a new venture maze using MAGICdb – Mango Genetic stocks Identification and Characterisation

TNAU Genomics - http://www.tnaugenomics.com/mango/TNAU Genomics http://www.tnaugenomics.com/mango/

Page 3: Magi cdb  mango genetic stocks identification and characterisation database

Objective

• To provide an user friendly and organized method to store and retrieval of the data of various users in the mango industry .

• To locate the mango varieties and features on the real location using the geolocation locator .

TNAU Genomics - http://www.tnaugenomics.com/mango/TNAU Genomics http://www.tnaugenomics.com/mango/

Page 4: Magi cdb  mango genetic stocks identification and characterisation database

Material and Methods

TNAU Genomics - http://www.tnaugenomics.com/mango/TNAU Genomics http://www.tnaugenomics.com/mango/

• Data is organized into database in three layers.1. First layer – User Interface2. Second layer – Interface3. Third layer – Database• User interface is developed using HTML,CSS and JDK.• Interface between the first and third layer is PHP (Hypertext

Pre Processor)• Database is MySQL database, which is the most widely used

database.• Morphological and Fruit quality data are collected from the

ten major commercial cultivars.

Page 5: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

Database Schema

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 6: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb - Home page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 7: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Morphological Search page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 8: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Morphological Search page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 9: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Morphological Search page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 10: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Morphological Search Result page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 11: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Fruit Quality Search page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 12: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Fruit Quality Search Result page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 13: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Marker Search page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 14: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

MAGICdb – Marker Search Result page

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 15: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

Already available resources on Mango

• Mango Resources Information System (http://www.mangifera.org/index.php)

• RainForest Database (http://rainforest-database.com/plants/mango.htm)

• International Mango Industry (http://www.allaboutmangoes.com/index.asp)

• NewCROP (http://www.hort.purdue.edu/newcrop/default.html)

• National Horticultural Board (http://nhb.gov.in/bulletin-fruits.html)

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 16: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

Conclusion

• MAGICdb is an organized database that provides the information about the mango’s morphological, fruit quality characters and marker data.

• On the other hand it provides mango processors, students and, people of all community with a complete set of data to know about the major cultivated commercial ten mango cultivars.

• MAGICdb is one of its kinds to provide such information. • The information about the other varieties will also be added

in the days to come.

TNAU Genomics http://www.tnaugenomics.com/mango/

Page 17: Magi cdb  mango genetic stocks identification and characterisation database

TNAU Genomics - http://www.tnaugenomics.com/mango/

Reference

• M.Kumar (2012). Exploring Environmental, Physiological, Biochemical and Molecular characterization of off- season flowering phenomena in Mango (Mangifera indica L.) Ph.D. Thesis.

• Mario Latendresse and Peter D. Karp (2010). An advanced web query interface for biological databases. Database, Vol. 2010.

• Brad Bulger, Jay Greenspan and, David Wall (2004). MySQL/PHP Applications. Wiley Publications.

• PHP resource http://www.php.net • Mango Resources Information System

http://www.mangifera.org/index.php

TNAU Genomics http://www.tnaugenomics.com/mango/