measuring the greenness indexswac/docs/mod15/adi_greenness_activity.pdf · vegetation index is a...

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Measuring the Greenness Index Using Picture Post and AnalyzingDigitalImages to measure seasonal changes in vegetation Introduction A vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated from different combinations of spectral bands derived from digital images, often collected by satellites. They allow us to study the seasonality of vegetation growth, measure vegetation health, and assess whether an area has green vegetation or not. Satellites often use infrared and red bands to derive information about vegetation, but digital cameras typically collect only red, green and blue bands. By calculating a vegetation index (in this case, the ‘greenness index’) from the red, green, and blue bands of a digital image, we can track similar seasonal trends in vegetation that are measured by satellites. Higher greenness values relate to increased presence of chlorophyll in the vegetation being monitored. For this activity we have selected four images from the PicturePost website (http://picturepost.unh.edu) that were taken from 2008 to 2009 at Menotomy Rocks Park, in Arlington, MA. Each picture is from a different season of the year. Using the AnalyzingDigitalImages tool, you will be able to calculate a simple vegetation index from each picture to observe the change in greenness over time.

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Page 1: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

MeasuringtheGreennessIndex

UsingPicturePostandAnalyzingDigitalImagesto

measureseasonalchangesinvegetation

Introduction

Avegetationindexisasinglenumberthatmeasuresvegetationvigororbiomass.Vegetationindicesarecalculatedfromdifferentcombinationsofspectralbandsderivedfromdigitalimages,oftencollectedbysatellites.Theyallowustostudytheseasonalityofvegetationgrowth,measurevegetationhealth,andassesswhetheranareahasgreenvegetationornot.

Satellitesoftenuseinfraredandredbandstoderiveinformationaboutvegetation,butdigitalcamerastypicallycollectonlyred,greenandbluebands.Bycalculatingavegetationindex(inthiscase,the‘greennessindex’)fromthered,green,andbluebandsofadigitalimage,wecantracksimilarseasonaltrendsinvegetationthataremeasuredbysatellites.Highergreennessvaluesrelatetoincreasedpresenceofchlorophyllinthevegetationbeingmonitored.

ForthisactivitywehaveselectedfourimagesfromthePicturePostwebsite(http://picturepost.unh.edu)thatweretakenfrom2008to2009atMenotomyRocksPark,inArlington,MA.Eachpictureisfromadifferentseasonoftheyear.UsingtheAnalyzingDigitalImagestool,youwillbeabletocalculateasimplevegetationindexfromeachpicturetoobservethechangeingreennessovertime.

Page 2: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

InitialObservations

Takealookateachofthefourpicturesprovided.Whatdoyounoticeabouttheimages?Howdoyouthinktheywillchangeingreennessovertime?Whichfeaturesinthepicturewillchangethemost?Theleast?

CalculatingtheGreennessIndexusingAnalyzingDigitalImages

1. OpentheAnalyzingDigitalImagessoftware.

2. Clickonthe buttononthebottom‐leftcornerofthescreen.Inthe‘open’window,choosethepictureyouwouldliketoopen.

3. Awindowwillpopupaskingyouto“selectmethodtocalibratethepixelsize.”

Choose

Page 3: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

4. Yourimageshouldnowappearonthescreen.Under‘SelectSpatialTool’dropdownmenu,choosethe‘RectangleTool.’

5. Thistoolallowsyoutoselectasmallsectionofthepicture.Clickonthepictureand

holdthemousedownwhiledraggingitacrossthescreentoselecttherectangle.Chooseonefeatureinthepicturetofocuson(somethingthatyouthinkwillchangein‘greenness’overtime)andrecordwhatfeatureyouchoseonyourworksheet.Placetherectangleoverthatfeature,youdon'tneedtoencompassthewholefeatureintherectangle;justasmallsectionofitisenough!Onceyouhaveyourrectangle,thescreenshouldlooklikethis:

Page 4: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

6. RecordtheXandYstartandstoppositionsforyourrectangleinthetablebelow:

X YStartPoint

StopPoint

7. Atthebottomleftcornerofthescreenthereisachartofcolorintensities.Recordthered,green,andbluecolorintensityinyourdatatable.

8. Withoutmovingtherectangleorclickingonthepictureagain,gotoFile→OpenPicture.Ifyouaccidentallymovetherectangle,youcanusetheXandYpointsyourecordedabovetorecreateit.

9. Chooseanewpicturefromadifferentseasonandclick‘Open.’

10. Awindowwillpopupaskingifyouwouldliketokeepthesamesettings.YES!Click

YournewimagewillnowappearwiththeSAMErectangleyoualreadycreated.

11. Again,recordthered,green,andbluecolorintensitiesinyourdatatable.

12. Repeatsteps8through11fortheremainingtwopictures.

Page 5: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

MeasuringGreennessIndex­ActivityWorksheet

1.Whatfeatureoftheimagedidyouchoosetomeasure?Whydidyouchoosethatfeature?

GreennessIndexDataTable

PictureDate

RedIntensity

GreenIntensity

BlueIntensity

GreennessIndex

2.Onceyouhaverecordedthered,green,andblueintensitiesforallpictures,usethespacebelowtocalculatethegreennessindexforeachdate,andrecordthevaluesinyourtable.Greennessindexiscalculatedbyusingtheequationbelow:

Page 6: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

3.MakeagraphoftheGreennessIndexovertimeusingthetemplateprovidedbelow.

4.Manysatellitesalsomeasurevegetationindices.OneoftheseindicesistheNormalizedDifferenceVegetationIndexorNDVI,whichalsomeasuresthe‘greenness’ofanarea,butiscalculatedusingacombinationofinfraredandredbands.Inthetablebelow,wehaveprovidedtheNDVIvaluesmeasuredbytheMODIS(Moderate‐ResolutionImagingSpectroradiometer)satelliteforthesameareaanddatesthatthesePicturePostimagesweretaken.UsingtheseNDVIvalues(andadifferentcolorpen!),plotNDVIforeachdateonthegraphabove.

Date NDVIApril2008 0.46June2008 0.64October2008 0.50January2009 0.53

0.0

0.2

0.4

0.6

0.8

1.0

Season

Gre

en

ne

ss I

nd

ex

Spring Summer Fall Winter

Page 7: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

DiscussionQuestions:

Firstly,takealookatthelineyougraphedthatrepresentstheGreennessIndex.Whatpatternsdoyouseeingreennessovertime?Isthiswhatyouexpectedfromyourinitialobservations?

NowlookatthelineyougraphedthatrepresentsNDVI.DoesitfollowthesamepatternastheGreennessIndex?Whyorwhynot?

Whydoyouthinkitisimportanttocalculatevegetationindices?Howcouldthistypeofinformationbemoreusefulthansimplylookingatthepictures?

Page 8: Measuring the Greenness Indexswac/docs/mod15/ADI_Greenness_Activity.pdf · vegetation index is a single number that measures vegetation vigor or biomass. Vegetation indices are calculated

Extensions

TherearemanydifferentvariationsonthisactivitythatcanbedoneusingPicturePostandtheAnalyzingDigitalImagessoftware.Forexample,usingthesameformatabove,youcouldcomparedifferentfeaturesofoneimage(Howdoesgreennessdifferbetweenthegrassandatree?Whatabouttheroad?);oryoucouldinvestigatehowdifferentfeatureschangeovertime(willyouseethesamepatternsingreennessifyoulookatadeciduousversusaconiferoustree?),orlookatthedifferencesbetweenimagestakenindifferentpartsofthecountryordifferentecosystems.

Onceyourstudentshavecompletedthisactivity,takealookatthePicturePostAnimation(http://globecarboncycle.unh.edu/climate/ppost_new/picturepost6.html),linkedunderthePicturePostheadingoftheClimateResourceDirectorypage.Thisanimationusespicturesfromthesamesiteusedinthisactivity,butalsoincludessatellitedataofalbedo(thereflectanceofagivensurface).Usethetooltoexploretherelationshipbetweenalbedo,andgreenness,andwhatthehighandlowvaluesonthegraphslooklikeintheimages.

Implementingthistoolinyourclassroom

IfyouplanonsettingupaPicturePostinyourclassroom,thisactivityisagreatway

tomeasurechangesinthelandscapeovertime,andtomaketheconnectionbetweenwhatyouobserveinyourlocallandscapeandwhatismeasuredbysatellitedata.HaveaposterboardorexceldatatableandgraphofthegreennessindexinyourclassroomthatyourstudentscanaddtoeachtimeyoumakeanewPicturePost.FormoreinformationonimplementingPicturePostinyourclassroom,seethe‘OverviewofPicturePostLearningProgression’documentandthePicturePostwebsite(http://picturepost.unh.edu).

TheAnalyzingDigitalImagessoftwareispartoftheDigitalEarthWatch(DEW),andisavailableathttp://mvh.sr.unh.edu/software/software.htm#download.Moreresourcesarealsoavailableathttp://www.lawrencehallofscience.org/gss/rev/ip.