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    Microbiology

    MicrobialMetabolismIIntroductiontoMetabolism

    Ching-TsanHuang()

    Office: Room 111, Agronomy HallTel: (02) 33664454

    E-mail: [email protected]

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    IntroductionWhystudymicrobiology?

    To control and utilization of MICR RGANI$M$

    Transport

    ChemicalWork

    Mechanical

    Heat

    Metabolism

    Catabolism

    Anabolism

    Physiology

    Photosynthesis

    Maintenance

    Growth

    Respiration

    Reproduction

    Fermentation

    Physiology: The study of life processes in living cells

    Metabolism: The total of all chemical reactions in cells

    Whymicrobialmetabolism?

    LightEnergy

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    Substrates ProductsAnabolism

    Enzymes

    Overviewofmetabolism

    LightEnergy

    Photosynthesis

    Energy

    Catabolism

    Purpose: Trapping, generation and use of energy

    Where: within cells (under controlled temperature and pH)

    How: catalyzed by enzymes

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    Metabolismofmicroorganisms

    Interchangeable

    Macro-tomicro-moleculesorviceversa

    Catabolism

    Polysaccharides

    Lipids

    Proteins

    Nucleicacids

    Polymers

    Monosaccharides

    Fattyacids,glycerol

    Aminoacids

    Nucleotides

    Monomers

    Anabolism

    CO2

    H2O,O2

    NH4+,NO3-

    PO4-,SO4=

    Molecules

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    Oxidation-ReductionReaction

    ElectronCarriers

    ATP (adenosine triphosphate)

    ReactionandEnergy

    Without

    enzyme

    With

    enzyme

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    Oxidation-ReductionReaction

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    ElectronTransportSystems

    NADH

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    ElectronCarriersTransferelectronsbetweendifferentlocations

    Energyflowinmetabolism

    NAD+ nicotinamide adenine dinucleotide

    NADP+ nicotinamide adenine dinucleotide phosphate

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    ATP:AdenosineTriPhosphate

    Ahigh-energymolecule

    ATP + H2O ADP + Pi Go = -7.3 kcal/mol

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    EnzymeStructure

    Apoenzyme

    protein component of an enzyme

    Cofactor

    nonprotein component of an enzymeprostheticgroup firmly attached

    coenzyme loosely attached

    Holoenzyme = apoenzyme + cofactor

    Coenzymeoften act as carriers, transporting

    substances around the cell

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    Enzymes:Classification

    Oxidoreductase

    Transferase

    Hydrolase

    Lyase

    Isomerase

    Ligase

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    Enzymes

    CharacteristicsLower activation energy

    Key-Lock relation:

    active or catalytic site

    Catalyze reactions by

    concentrating substrateand binding correctly

    Environmental

    Effects

    pHTemperature

    Denature

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    MetabolicRegulation

    NatureExceptionally complex and difficult

    Able to respond to environmental changes

    Significance

    Essential for the cell to conserve energy and materialEssential for the cell to maintain metabolicbalance

    How

    Amount of metabolites and enzymes

    Activity of enzymesFeedback inhibition

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    MetabolicChanneling

    Compartmentationthe differential distribution of enzymes and

    cofactors among separate cell structures

    Enzymeactivityis coordinated

    through regulation of

    the transport of

    metabolites and

    coenzymes betweencell compartments

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    RegulationMechanisms

    CentralDogma

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    AllostericRegulation

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    Example

    E.coliACTase

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    CovalentModification

    Reversibleaddition

    orremovalofa

    chemicalgroup

    altersenzymeactivity

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    Feedback(EndProduct)InhibitionMaintainappropriateconcentrationforeachmetabolite

    Pacemakerenzymeorrate-determiningreaction