ncbi national center for biotechnology information
TRANSCRIPT
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NCBINCBI
National Center for Biotechnology Information
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Cytochrome c Oxidase
subunits I and II
Picture: http://www.ks.uiuc.edu/Research/bio_ener/cco/Source: www.pdb.org/pdb/static.do?p= education_discussion/molecule_of_the_month/pdb5_1.html
Controls the last step in the oxidation of food. This
enzyme add electrons and hydrogen to oxygen to form
water.
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http://www.ncbi.nlm.nih.gov
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Cytochrome c Oxidase subunit 1
mt
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Clustalw2
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Go back to your
download. Copy and
paste into this box.
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Scroll down to Submit.Click, then
wait.
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Phylogram is a branching diagram (tree) assumed to be an estimate of a phylogeny, branch lengths are proportional to the amount of inferred evolutionary change.
A Cladogram is a branching diagram (tree) assumed to be an estimate of a phylogeny where the branches are of equal length, thus cladograms show common ancestry, but do not indicate the amount of evolutionary "time" separating taxa.
FROM EMBL-EBI
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Go back to the download and annotate with the scientific name. Research and add the common name. Does this tree agree with
what you assumed about these organisms?
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Pan troglodyte- ChimpanzeeCanis lupus familiaris- Dog
Bos taurus-CattleMus musculus-
MouseRattus norvegicus-Brown RatGallus gallus- ChickenDanio rerio-Zebrafish
Drosophila melanogaster-Fruit FlyAnopheles gambiae-
MosquitoCaenorhabditis elegans-nematodeSchizosaccharomyces pombeFission Yeast
Saccharomyces cerevisiae-buddingBudding yeast Kluyveromyces lactisLactose converting yeast
Ashbya gossypiiFilamentous fungusArabidopsis
thalianaMouse ear cress
Oryza sativa Indica Group-RicePlasmodium falciparum-malaria
protozoans
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Choose your own Choose your own proteins and proteins and organismsorganisms
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Insulin is a good Insulin is a good searchsearch
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Copy the FASTA codeCopy the FASTA code
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Into notepadInto notepadStart with three proteins. Add one or two at
a time . Hypothesize the relationship.
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Check in ClustalW2Check in ClustalW2