networkanalystgalaxyservertutorial1 ......seq data this networkanalyst galaxy server is designed for...
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NetworkAnalyst Galaxy Server Tutorial 1 –Building Collection for Paired-end RNA-seqExperiments
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Choose Data Libraries under Shared Data toview our example RNA-seq files.
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Click on this library for the paired-end case
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1) Click on “Change” to make sure all filesare viewed for selection
2) Insert 20 for this libraryand click on “OK”.
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1) Click on this checkbox to select allfiles.
2) After file selection, click on “To History” andchoose “as a Collection”.
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1) Select “List of Pairs” forpaired-end experiments
2) Click on “Continue”
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2) Assign a name to thecollection
1) Galaxy provides aflexible way to pairsamples using a filterwith certain pattern.For example, “_1”refers to forward readsand “_2” for thereverse ones.
3) Finally, click on“Create list” and nowyou can run paired-endworkflows. They willdirectly recognize thecreated collection aslong as you run fromthe same history.
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