olga giraldo flashtalk_icbo2015
TRANSCRIPT
Instrument Mortar and pestle
Reagent Triton X-100
Sample DNA
Cell disruption
Grind the leaf tissue using a mortar and pestle
DNA purification
Precipitate the DNA with 0.6 mL of 2-propanol.
Goal: to accurately document and retrieve experimental protocols.
Why: the protocols facilitate experimental reproducibility.
How to represent the information from protocols as a knowledge base?
…and NLP tools
By using ontologies