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Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

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Page 1: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Auxin and Fruit SetThe role Solanum lycopersicum Auxin Response Factor 1

in the initiation of fruit development

Page 2: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Content

• Introduction

• Gibberellins

• Pollen tube growth

• cDNA-AFLP

Page 3: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Auxin

• Cell elongation• Embryo patterning• Apical dominance• Vascular differentiation• Abscission• Tropisms• Root morphology• Fruit set

Introduction

Page 4: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Auxin

Introduction

Gillapsy;1993

Page 5: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Introduction

Woodward; 2005

Page 6: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Wt 79.8

Introduction

Page 7: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Wt 79

Introduction

Page 8: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Wt

79

Introduction

Page 9: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Gibberellins

Samples

Wt 3 days poll

Wt 3 days unpoll

pathway

Page 10: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Gibberellins

Page 11: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Gibberellins

Samples

Wt day -2

Wt day 5 poll

Wt day 5 unpoll

79.8 day -2

79.8 day 5

To do…

Welke genen?

Page 12: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀Wt x ♂Wt

Page 13: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀Wt x ♂Wt

Page 14: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀Wt x ♂Wt

Page 15: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

♀Wt x ♂Wt

Page 16: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

250x

♀Wt x ♂Wt

Page 17: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

♀79.8 x ♂79.8

Page 18: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀79.8 x ♂79.8

Page 19: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀79.8 x ♂79.8

Page 20: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

♀79.8 x ♂79.8

Page 21: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

250x

♀79.8 x ♂79.8

Page 22: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 23: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 24: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

250x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 25: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 26: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

250x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 27: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

100x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 28: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

250x

40x

♀79.8 x ♂wt

40x

♀wt x ♂79.8

Page 29: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x

79.8

Page 30: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x 100x

250x 400x

79.8

Page 31: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Pollen tube growth

40x 100x

250x 400x

79.8

To be continued

Page 32: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

cDNA-AFLP

Samples79.8 D0 emasc. Ovaries79.8 D0 emasc. Walls

79.8 D5 emasc. ovaries79.8 D5 emasc. walls

79.8 D0 not emasc. ovaries79.8 D0 not emasc. walls

79.8 D5 not emasc. ovaries79.8 D5 not emasc. Walls

wt D0 unpoll ovarieswt D0 unpoll walls

wt D5 unpoll ovarieswt D5 unpoll walls

wt D5 poll ovarieswt D5 poll walls

166.17 D1 unpoll ovaries166.17 D1 unpoll walls

166.17 D3 unpoll ovaries166.17 D3 unpoll walls

166.17 D1 poll ovaries166.17 D1 poll walls

166.17 D3 poll ovaries166.17 D3 poll walls

wt D1 unpoll ovarieswt D1 unpoll walls

wt D3 unpoll ovarieswt D3 poll walls

wt D1 poll ovarieswt D1 poll walls

wt D3 poll ovarieswt D3 poll walls

159 ovaries159 walls

Page 33: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

cDNA-AFLP

Order on gelwt D0 unpoll ovarieswt D1 unpoll ovarieswt D3 unpoll ovarieswt D5 unpoll ovarieswt D1 poll ovarieswt D3 poll ovarieswt D5 poll ovarieswt D0 unpoll wallswt D1 unpoll wallswt D3 unpoll wallswt D5 unpoll wallswt D1 poll wallswt D3 Poll wallswt D5 poll walls

166.17 D1 unpoll ovaries166.17 D3 unpoll ovaries166.17 D1 poll ovaries166.17 D3 poll ovaries166.17 D1 unpoll walls166.17 D3 unpoll walls166.17 D1 poll walls166.17 D3 poll walls

79.8 D0 emasc. ovaries79.8 D5 emasc. ovaries79.8 D0 not emasc. ovaries79.8 D5 not emasc. ovaries79.8 D0 emasc. walls79.8 D5 emasc. walls79.8 D0 not emasc. walls79.8 D5 not emasc. Walls

159 ovaries159 walls

Page 34: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

cDNA-AFLP

Primer combination 69

Page 35: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

cDNA-AFLP

Wt 166.17 79.8 159

Ovules OvulesOvulesWalls

Unpoll

PollPoll Poll

WallsWalls

Unpoll

Poll

E

NE

O W

E

NE

Primer combination 69

0 1 3 5 0 1 3 5 1 3 1 3 1 3 1 3 0 5 0 5 0 5 0 5 1 3 5 1 3 5

Unpoll Unpoll

Page 36: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Ovules OvulesOvules

cDNA-AFLP

Walls

Unpoll Unpoll Unpoll

PollPoll Poll

WallsWalls

Unpoll

Poll

E

NE

O W

E

NE

Primer combination 69

Wt 166.17 79.8 159

0 1 3 5 0 1 3 5 1 3 1 3 1 3 1 3 0 5 0 5 0 5 0 5 1 3 5 1 3 5

Page 37: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Ovules OvulesOvules

cDNA-AFLP

Walls

Unpoll Unpoll Unpoll

PollPoll Poll

WallsWalls

Unpoll

Poll

E

NE

O W

E

NE

Primer combination 69

Wt 166.17 79.8 159

0 1 3 5 0 1 3 5 1 3 1 3 1 3 1 3 0 5 0 5 0 5 0 5 1 3 5 1 3 5

Page 38: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

cDNA-AFLP

Ovaries OvariesOvariesWalls

Unpoll Unpoll Unpoll

PollPoll Poll

WallsWalls

Unpoll

Poll

E

NE

O W

E

NE

Primer combination 143

Wt 166.17 79.8 159

0 1 3 5 0 1 3 5 1 3 1 3 1 3 1 3 0 5 0 5 0 5 0 5 1 3 5 1 3 5

Page 39: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Ovules OvulesOvules

cDNA-AFLP

Walls

Unpoll Unpoll Unpoll

PollPoll Poll

WallsWalls

Unpoll

Poll

E

NE

O W

E

NE

Primer combination 69

Wt 166.17 79.8 159

0 1 3 5 0 1 3 5 1 3 1 3 1 3 1 3 0 5 0 5 0 5 0 5 1 3 5 1 3 5

ARF9

Page 40: Plant Cell Biology Wouter Kohlen 0427705 Auxin and Fruit Set The role Solanum lycopersicum Auxin Response Factor 1 in the initiation of fruit development

Plant Cell Biology Wouter Kohlen 0427705

Primer combination 166