population genetics - western oregon university

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Population Genetics Population Genetics Hardy-Weinberg equilibrium • Microevolution • Mutation Genetic Drift • Migration Non-random mating Natural selection Heterozygote advantage

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Page 1: Population Genetics - Western Oregon University

Population Genetics• Population Genetics• Hardy-Weinberg equilibrium• Microevolution • Mutation • Genetic Drift • Migration • Non-random mating • Natural selection• Heterozygote advantage

Page 2: Population Genetics - Western Oregon University

Population Genetics

• Population• gene pool• allele frequency• polymorphism

Page 3: Population Genetics - Western Oregon University

Determining allele frequency

• starch gel electrophoresis

Page 4: Population Genetics - Western Oregon University

DNA Markers

Page 5: Population Genetics - Western Oregon University

Hardy-Weinberg equilibrium

• gene and genotype frequency do not change due to sexual reproduction alone

• Five assumptions• large population • no selection • no mutation • no migration • random mating

Page 6: Population Genetics - Western Oregon University

Hardy-Weinberg• allele frequency:

p + q = 1.0

• genotype frequency: p2 + 2pq + q2 = 1.0

determine if population is in HW equilibrium

Page 7: Population Genetics - Western Oregon University

Multiple alleles

Page 8: Population Genetics - Western Oregon University

Calculations

• recessive allele frequency

• heterozygote frequency

• sex-linked genes and allele frequency

Page 9: Population Genetics - Western Oregon University

Heterozygotes

Page 10: Population Genetics - Western Oregon University

Microevolution

• Change in allele frequencies

• 5 mechanisms• Which assumption not

valid?

Page 11: Population Genetics - Western Oregon University

Mutation

• Mutation rate (µ): 10-5 to 10-6 per generation

• Pt = Poe-µt t= # of generations

• To reduce P by ½, if µ= 10-5 & Po =0.96• Requires 69,000 generations• Mutation source of genetic variation does not

really cause rapid evolutionary change

Page 12: Population Genetics - Western Oregon University

Gene Flow• homogenizing force • calculate changes in

allele frequency due to migration

• ∆p = m(pm – po)• M= fraction of migrants

to original population• Pm= allele freq of

migrating population• Po= allele freq of

original population

Page 13: Population Genetics - Western Oregon University

MigrationB allele of Blood types

Page 14: Population Genetics - Western Oregon University

Genetic Drift

• small population • fixed alleles and

extinction

Page 15: Population Genetics - Western Oregon University

Genetic Drift

• founder effect • bottleneck effect

Page 16: Population Genetics - Western Oregon University

Non-Random Mating

• assortative mating • loss of heterozygotes• disassortative mating• Inbreeding

depression• Higher levels of

genetic diseases

Page 17: Population Genetics - Western Oregon University

Natural selection

• Differential reproductive success

• Selection coefficient• Relative fitness of

genotypes

Complete selection against recessive

qn = qo/ (1+ nqo)

Page 18: Population Genetics - Western Oregon University

Selection

Page 19: Population Genetics - Western Oregon University

Calculating relative fitness

Page 20: Population Genetics - Western Oregon University

Heterozygote advantage

Page 21: Population Genetics - Western Oregon University

Heterozygote advantage

• Qeq = S1/ (S1 + S2)• Sickle cell anemia • balanced

polymorphism • Why is Hbs

maintained in the population?

• What happens in US to allele frequency?

Page 22: Population Genetics - Western Oregon University