publications - shodhganga : a reservoir of indian...
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PUBLICATIONS
� Richa Trivedi, Ahmad Raza Khan, Poonam Rana, Seenu Haridas, BS Hemanth
Kumar, Kailash Manda, Ram KS Rathore, Rajendra P Tripathi, Subash Khushu.
Radiation- Induced Early Changes in the Brain and Behavior: Serial Diffusion Tensor
Imaging and Behavioral Evaluation after Graded Dose of Radiation. J. Neurosc. Res.
(Accepted)
� A.R. Khan, P. Rana, R. Tyagi, M. M. Devi, S. Chaturvedi, S. Javed, and S.
Khushu. Identification of pathophysiological perturbations and metabolic
phenotypes based on urinary NMR spectral profiling after graded radiation
exposure in mice. (Submitted)
� Poonam Rana, Ahmad Raza Khan, Shipli Modi, B. S. Hemanth Kumar, Salim
Javed, Rajendra Prasad Tripathi and Subash Khushu.
Brain Metabolism Impairment
after Whole-body Irradiation in Mice: An in-vivo 1H Magnetic Resonance
Spectroscopy Study. (Submitted after revision)
� Ahmad Raza Khan, Poonam Rana, Ritu Tyagi, Indracanti Prem Kumar, M. Memita
Devi, Salim Javed, Rajendra P. Tripathi, Subash Khushu. NMR spectroscopy based
metabolic profiling of urine and serum for investigation of physiological perturbations
during radiation sickness. Metabolomics (2011). DOI: 10.1007/s 1306-011-02774.
� Ahmad Raza Khan, Poonam Rana, M Memita Devi, Shubhra Chaturvedi, Salim
Javed, Rajendra P Tripathi, Subash Khushu. Nuclear Magnetic Resonance
Spectroscopic-based metabonomic investigation of the biochemical effects in serum
of γ irradiated mice. Intl. J. Rad .Biol. (2011), 87 (1); 91-97.
� Ritu Tyagi, Poonam Rana, Ahmad Raza Khan, Deepak Bhatnagar, M Memita
Devi, Shubhra Chaturvedi, Rajendra P. Tripathi, Subash Khushu. Study of acute
biochemical effects of thallium toxicity in mouse urine by NMR spectroscopy.
J.Appl. Toxicol. (2010) doi:10.1002/jat.1617
� Ritu Tyagi, Poonam Rana, Mamta Gupta, Ahmad Raza Khan, Deepak Bhatnagar,
P J S Bhalla, Shubhra Chaturvedi Rajendra P Tripathi, Subash Khushu. Differential
Biochemical Response of Rat Kidney towards Low and High Doses of NiCl2 as
Revealed by NMR Spectroscopy. J.Appl. Toxicol. (2011).doi:10.1002/jat.1730
� Ritu Tyagi, Poonam Rana, Mamta Gupta, Ahmad Raza Khan, M Memita
Devi,Deepak Bhatnagar, Raja Roy, Rajendra P Tripathi, Subash Khushu. Urinary
Metabolomic Phenotyping of Nickel induced Acute Toxicity in Rat: A NMR
Spectroscopy approach. Metabolomics (Accepted).
PAPER PRESENTED IN CONFERENCES
� Mamta Gupta, Richa Trivedi, Poonam Rana, Ahmad Raza Khan, Ravi Soni, Subash
Khushu. Differential Effects of Fractionated and Single Radiation Dose on Diffusion
Tensor Imaging in Mice Brain Proc. Intl. Soc. Mag. Reson. Med, Melbourne,
Australia, (2012).
� Mamta Gupta, Poonam Rana, Richa Trivedi, Ahmad Raza Khan, Ravi Soni1,
Subash Khushu. A Comparative Evaluation of Brain Metabolites following Whole
Body and Cranial Irradiation: A Prospective 1H MRS Study. Proc. Intl. Soc. Mag.
Reson. Med, Melbourne, Australia, (2012).
� Ahmad Raza Khan, Poonam Rana, Shubhra Chaturvedi and Subash Khushu. Acute
effect of gamma irradiation in mice by NMR based metabolic profiling of urine.
Proc. Intl. Soc. Mag. Reson. Med, Stockholm, Sweden,(2010)
� Poonam Rana, Ahmad Raza Khan, Shubhra Chaturvedi and Subash Khushu. NMR
spectroscopy based study of physiological perturbations during recurrence of
symptoms in radiation sickness. Proc. Intl. Soc. Mag. Reson. Med, Stockholm,
Sweden, (2010)
� Ritu Tyagi, Poonam Rana, Ahmad Raza Khan, Memita Devi, Shubhra Chaturvedi
and Subash Khushu. Toxicological effect of thallium in mice by NMR-based
metabolic profiling of urine. Proc. Intl. Soc. Mag. Reson. Med, Stockholm, Sweden,
(2010
� Ahmad Raza Khan, Poonam Rana, M. Memita Devi, Shubhra Chaturvedi and
Subash Khushu. NMR spectroscopy based study of physiological perturbations in
radiation sickness Poster presented at 16th
NMRS Meeting, Held at CBMR, SGPGI,
Lucknow (2010).
� Ahmad Raza Khan, Poonam Rana, Sahil Moza, Shubhra Chaturvedi and Subash
Khushu. NMR spectroscopic based metabonomic investigation on the biochemical
effects induced by γ radiation exposure in mouse serum Proc. Intl. Soc. Mag.
Reson. Med.Honolulu, Hawaii,(2009).
� Poonam Rana, Ahmad Raza Khan, Poonam Singh, Shubhra Chaturvedi, Rajendra
Prasad Tripathi, Subash Khushu. High Resolution MR Spectroscopy Reveals
Radiation Induced Metabolic Changes in Mouse Liver Tissues. Proc. Intl. Soc. Mag.
Reson. Med.Honolulu, Hawaii,(2009).
� Poonam Rana, Ritika Agarwal, Ahmad Raza Khan, Shubhra Chaturvedi, Rajendra
Prasad Tripathi, Subash Khushu. Exploration of the Effect of Whole Body Ionising
Radiation Exposure on the Metabolism of Renal Tissue in Mice Using High
Resolution 1H NMR Spectroscopy. Proc. Intl. Soc. Mag. Reson. Med.Honolulu,
Hawaii,(2009).
� Poonam Rana, Ahmad Raza Khan, Ritika , Poonam Singh, Shubhra Chaturvedi,
and Subash Khushu. .Exploration of the Effect of Whole Body Ionizing
Radiation Exposure on the Renal and Hepatic Tissue Metabolism in Mice Using
High Resolution H NMR Spectroscopy. Poster presented at 15th
NMRS Meeting,
Held at IICT, Hyderabad (2009).
� Poonam Rana, Ahmad Raza Khan, Sahil Moza, Shubhra Chaturvedi and
Subash Khushu. Metabolic Profiling of Serum from Mice under Radiation Stress
using High Resolution NMR Spectroscopy. IISc Centenary Symposium on
Future Directions in NMR October 19-22, 2008.
� P. Rana, A. Varshney, G. Shreepathy, Ahmad Raza Khan, R.K. Marwah and S.
Khushu (2008). Muscle Bioenergetics in subclinical hypothroidism: A 31P MRS
study. Poster presented at 14th
NMRS Meeting, Held at INMAS, Delhi. 16th
-19th
Jan
2008.
Nuclear magnetic resonance spectroscopy-based metabonomicinvestigation of biochemical effects in serum of g-irradiated mice
AHMAD RAZA KHAN1, POONAM RANA1, M. MEMITA DEVI1,
SHUBHRA CHATURVEDI2, SALIM JAVED3, RAJENDRA P. TRIPATHI1, &
SUBASH KHUSHU1
1NMR Research Centre, and 2Division of Cyclotron & Radiopharmaceutical Sciences, Institute of Nuclear Medicine and Allied
Sciences (INMAS), India, and 3Department of Biochemistry, Jamia Hamdard, Delhi, India
(Received 13 January 2010; Revised 22 July 2010; Accepted 29 July 2010)
AbstractPurpose: Radiation exposure induces change in many biological compounds. It is important to assess the physiological andbiochemical response to an absorbed dose of ionising radiation due to intentional or accidental event and to predict medicalconsequences for medical management. In the present study, nuclear magnetic resonance (NMR) spectroscopy-basedmetabolic profiling was used in mice serum for identification of radiation-induced changes at metabolite level.Materials and methods: Mice were irradiated with 3, 5 and 8 Gray of g-radiation dose and serum samples collected at day 1,3 and 5 post irradiation were analysed by proton nuclear magnetic resonance (1H NMR) spectroscopy. 1H NMR spectra ofserum were analysed by pattern recognition using principal component analysis.Results: Irradiated mice serum showed distinct metabonomic phenotypes and revealed dose- and time-dependent clustering ofirradiated groups. 1H NMR spectral analysis exhibited increased lactate, amino acids, choline and lipid signals as well asdecreased glucose signals. These findings indicate radiation-induced disturbed energy, lipid and protein metabolism.Conclusions: The information obtained from this study reflects multiple physiological dysfunctions. The study promises theapplication of NMR-based metabonomics in the field of radiobiology, for development of metabolic-based markers forscreening of risk populations and medical management in these cases.
Keywords: radiation, NMR spectroscopy, serum, metabonomics
Abbreviations: NMR, nuclear magnetic resonance; FID, free induction decay; PCA, principal components analysis;PR, pattern recognition; BCA, branched chain amino acid; PC, principal component; TSP, 3-(Trimethylsilyl)propionic-2, 2, 3, 3-d4 acid sodium salt; Gy, gray; LDL, low density lipoprotein; VLDL, very low density lipoprotein;ROS, reactive oxygen species.
Introduction
The study of normal tissue response and injury after
exposure to moderate dose of ionising radiation is of
great importance to patients with cancer, and people
potentially subjected to military, nuclear power
industry and radiological terrorism (Coleman et al.
2003). The resulting radiation injuries would be due
to a series of molecular, cellular, tissue and whole
organal processes. During the last decade, research
in the field of radiation sciences has been more
focused on the development of a multiparametric
approach for studying gene, protein and other
biochemical expressions after radiation exposure
(Bertho et al. 2008). To develop a multiparametric
approach, inputs from all relevant fields using high
throughput technology are required at cellular,
biochemical and molecular levels since damage from
ionising radiation occurs at cellular and systemic
levels.
Since the last decade, the metabonomics approach
is becoming increasingly popular as the source of
biomedical data. Mass spectrometry and proton
nuclear magnetic resonance (1H NMR) spectroscopy
are the two key experimental methods applied in this
area of global biochemistry. In particular, 1H NMR
spectroscopy has the advantage of efficiently obtain-
ing information on large number of metabolites in
Correspondence: Dr Subash Khushu, NMR Research Centre, INMAS, DRDO, Lucknow Road, Timarpur, Delhi, India. Tel: þ91 11 23905313.
Fax: þ91 11 23919509. E-mail: [email protected]
Int. J. Radiat. Biol., 2010, Early Online, pp. 1–7
ISSN 0955-3002 print/ISSN 1362-3095 online � 2011 Informa UK, Ltd.
DOI: 10.3109/09553002.2011.518211
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biofluids such as serum, in vitro, ex vivo and in vivo
in various tissues that could serve as snapshots of
physiological states (Ala-Korpela 2008). Proton
nuclear magnetic resonance (NMR) spectrum en-
ables the simultaneous identification and monitoring
of a wide range of low molecular weight endogenous
metabolites, thus providing a biochemical fingerprint
of an organism (Nicholson and Wilson 1989). It is
now well established that this profile gets altered in
disease or toxic process and a metabonomic
approach can be successfully applied to various
toxicological, disease evaluation and risk assessment
studies (Holmes et al. 2000, Lindon et al. 2004,
Serkova and Niemann 2006, Ala-Korpela 2008).
Several biological compounds are altered in body
tissues after radiation exposure (Walden and Farza-
neh 1990). However, little is known on how the body
responds to ionising radiation at a metabolite level,
which may represent the most incisive indicator of
cellular physiology. Recently, a few metabolomic
studies based on ultra performance liquid chromato-
graphy (UPLC), and gas chromatography-mass
spectrometry (GC-MS) have reported several meta-
bolites of energy, purine and pyrimidine metabolism
as urinary biomarkers in rodents with radiation
exposure (Patterson et al. 2008, Tyburski et al.
2008, Lanz et al. 2009). It is necessary to explore
metabolic markers of ionising radiation exposure
based on a physiological and biochemical response
that can be used for mass screening in the events of
radiological incidents. Analysis of biofluids such as
serum and urine is the simplest and minimally
invasive approach to work at a mass screening level.
The present study was undertaken to investigate the
biochemical and physiological perturbations after
ionising radiation exposure in mouse serum using
metabonomic approach based on high resolution
NMR spectroscopy.
Materials and methods
Animal handling, radiation exposure and sample
collection
Strain ‘A’, male mice of 10 weeks of age obtained
from experimental animal facility of the institute
were placed in polypropylene cages. The mice
received tap water, were fed chow ad libitum and
were housed under a standard 12 h light/12 h dark
cycle and at controlled temperature of 25+ 28C and
relative humidity of 45–65%. All experimental
protocols and animal handling practices adopted in
this study were approved by institutional animal
ethical committee. Three groups with an equal
number of animals in each group (n¼ 18) were
exposed to gamma radiation doses of 3 (group I), 5
(group II) and 8 Gray (Gy) (group III), respectively,
and controls (n¼ 9, group IV) were sham irradiated.
The mice were irradiated through gamma irradiation
facility 60Co (Gammacell-220, Atomic Energy of
Canada Ltd (AECL), Ottawa, Ontario, Canada).
During the course of experimentation, the dose rate
of the source was 0.22 Gy/min. Irradiation was
performed on mice kept in pi-cage which was placed
in irradiation chamber. Air supply was established
through air pump in irradiation chamber to avoid
hypoxic condition. Approximately 400 ml blood
sample was collected between 09:00 and 10:00 h
through retro-orbital plexus route from controls and
irradiated animals. In the irradiated group, blood was
collected at three time points (day 1, 3 and 5) post
irradiation from one third of animals present in group
at each time point (n¼ 6, animals for each dose level
at each time point). Blood sample was allowed to clot
for 30 min and serum was separated by centrifuga-
tion at 2665 g for 10 min. All serum samples were
stored at7808C until NMR measurement.
Sample preparation and NMR spectroscopy
NMR solvents, trimethylsilyl-2,2,3,3-tetradeutero-
propionic acid (TSP) and deuterium oxide (D2O)
were obtained from Sigma-Aldrich (St Louis, MO,
USA). Serum sample of 200 ml was mixed with
400 ml of D2O and transferred to 5 mm NMR tubes
containing 1 mM TSP closed capillary (Wilmad, SP
Industries, Buena, NJ, USA) as reference. All NMR
spectra were acquired at 400.13 MHz, Bruker-AV
spectrometer (Bruker, Rheinstetten, Karlsruhe Ger-
many) at 298 K. Water suppressed Carr-Purcell-
Meiboom-Gill (CPMG) spin echo pulse sequence
(RD-908-(t71808-t) n-acquire) with a total spin
echo (2 nt) of 200 milliseconds was used to attenuate
broad signals from proteins and lipoproteins. Here
RD represents relaxation delay of 2 sec during which
water resonance is selectively irradiated, 908 repre-
sents a 908 radio frequency (RF) pulse, tau (t) is spin
echo delay, 1808 is 1808 RF pulse and n represents
number of loops. Typically 64 free induction decays
(FID) were collected into 32 K data points over a
spectral width of 8223.68 Hz with an acquisition
time of 3.98 sec. Each FID was weighted by an
exponential function with a 0.3-Hz line broadening
factor prior to Fourier transformation. 1H NMR
chemical shifts (d) in the spectra were referenced to
TSP at d 0.0 ppm and peaks identified on the basis of
chemical shifts were assigned according to previously
reported literature (Lindon et al. 1999).
Data reduction and pattern recognition (PR) analysis of1H NMR spectra
All the spectra were phase and baseline-corrected
using TOPSPIN (Bruker, Rheinstetten, Karlsruhe,
2 A. R. Khan et al.
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Germany). The spectra over the range (d 0.2–10.0
ppm) were reduced to 245 regions, each 0.04 ppm
wide and signal intensity in each region was
integrated. The region between d 4.5 and d 5.0
ppm was removed prior to any statistical analysis in
order to remove any spurious effects of variability in
the suppression of the water resonance. Following
removal of this region, each integral region was
divided by the sum of all integral regions for data
normalisation. PR analysis was done by carrying out
principal components analysis (PCA) on normalised
data. PCA is a well known statistical procedure for
data dimensionality reduction. It allows the expres-
sion of most of the variance within a data set in a
small number of newly transformed variables known
as principal component (PC). Each PC is a linear
combination of original variables whereby each
successive PC explains the maximum amount of
variance possible that is not accounted for by the
previous PC. Hence, each PC is orthogonal and
therefore, independent of the other PC. The output
of the method results in two matrices known as
‘score’ and ‘loadings’. Data were visualised by
plotting the Principal Component (PC) scores,
where each point on the score plot represents an
individual sample. The loading plots were used to
detect spectral areas responsible for separation in the
data, where each point represents one spectral
region. The resulted score values from PCA were
subjected to one way analysis of variance (ANOVA)
to test the levels of statistically significant differences
between treatment and controls. Pattern recognition
of NMR data was performed using in house
developed algorithm on Matlab 7.0 (MathWorks,
Natick, MA, USA). PCA plot generation and
statistical analysis were performed using Sigma plot
11.0 (Systat, San Jose, CA, USA)
Results
1H NMR analysis of serum samples from irradiated mice
A number of perturbations in endogenous metabo-
lites were observed in 1H NMR spectra of serum
samples of irradiated groups collected at different
time points. Figure 1 illustrates 400 MHz 1H NMR
spectra of serum samples from control and irradiated
mice at day 5 post irradiation. The metabolites of
serum affected by radiation exposure are tabulated in
Table I. By visual inspection, at day 1 post
irradiation, few metabolites were altered in group
III compared to controls but no changes had been
observed in Group I and II in respect to controls.
Prominent changes in endogenous serum metabo-
lites, branched chain amino acid (BCA), alanine,
lactate, betaine, choline and phosphoethanolamine,
were observed at day 5 post irradiation in all
irradiated groups compared to controls. Although
the lipid peaks of very low density lipoproteins
(VLDL) and low density lipoprotein (LDL) were
suppressed considerably by CPMG sequence, how-
ever, the peak intensities of VLDL and LDL for
irradiated groups were stronger than those for
control group.
Pattern recognition analysis of serum samples
PCA of NMR spectra was used initially to determine
whether irradiated groups and controls could be
distinguished post irradiation. The PC score plot
from analysis of 1H NMR spectra of serum sampled
at various time points (1, 3 and 5 days post
irradiation) for irradiated mice groups are shown in
Figure 2a–c.
At day 1, 1H NMR spectra and pattern recognition
analysis indicated no obvious change in the serum
samples from mice irradiated with 3 and 5 Gy of
radiation dose. Only mice exposed to 8 Gy could be
separated from controls at day 1 post irradiation.
Significant difference (ANOVA, p5 0.05) on PC1
and PC2 scores were observed between group I, III
and control on day 3 post irradiation. Therefore, at
day 3 time point, mice group irradiated with 3 and 8
Gy dose of radiation could be separated from control
in PC score plot. Remarkable differences (ANOVA,
p5 0.05) between the control and all three irradiated
groups were achieved along PC1 and PC2 axis at day
5 post irradiation that resulted in clear separation of
group I, II and III from control. To compare the
regions of the spectra contributing to the classifica-
tion, PC loading versus chemical shift was plotted in
all groups and control (Figure 3a–c). The PC loading
plots also showed the consistent characterisation
with visual inspection of serum 1H NMR spectra.
For example, the loading plots for irradiated mice
and control group suggested that the separation was
attributed to the NMR signals at d 0.86, 0.9, 0.94,
1.34, 1.48, 2.06, 3.22, 3.54 ppm corresponding to
LDL, VLDL, BCA, lactate, alanine, unsaturated
lipid, choline and glucose which confirmed the visual
comparison of the NMR spectra from irradiated and
control mice (Figure 3).
Discussion
A number of biological compounds become altered
after radiation exposure. These changes occur as a
result of the radiation damage, or in response to
mobilisation for repair, regeneration and cell pro-
liferation (Walden and Farzaneh 1990). Radiation-
induced changes could be reflected as biochemical
perturbations in biofluids. Earlier studies on bio-
chemical and physiological assays have yielded
some important insights into the complex response
Radiation-induced changes in serum by NMR spectroscopy 3
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to ionising radiation, (Altman 1971, Roy et al.
2006). Recently, NMR-based metabonomic meth-
ods have been utilised as a rapid analytical
technique for the study of biochemical variation
in biological fluid (Lindon et al. 2004, Ala-Korpela
2008). In the present study, results of 1H NMR
spectroscopy of serum provide strong evidence of
biochemical variation due to moderate radiation
exposure.
Radiation-induced energy metabolism disturbance and
oxidative stress
In the present study, a number of metabolites
involved in energy generation were perturbed as a
result of gamma irradiation. After radiation expo-
sure, decrease in serum sugar and an increase in
lactate was evident in all three irradiated groups. The
observed decrease in glucose and the concomitant
increase in lactate indicates enhancement in anaero-
bic metabolism. These changes resulted from in-
creased energy demand and were suggestive of
changes in carbohydrate and energy metabolism
after radiation exposure (Lerman et al. 1962).
Increased alanine in serum also suggests a metabolic
switch towards energy conservation and gluconeo-
genesis, which is activated in radiation diseases
(Borovikova et al. 1985). Our observations are in
concurrence with a recent GC-MS based study that
has reported down regulation of energy metabolites,
citrate, 2 oxo glutarate in urine samples in rats post
irradiation (Lanz et al. 2009).
Figure 1. Representative NMR spectra of serum from 3, 5 and 8 Gy irradiated group and control at day 5 post irradiation.
Table I. Summary of proton NMR spectroscopy based-radiation-induced variations in serum metabolites in irradiated mice as compared to
controls.
Metabolites
Chemical shift with
multiplicity (bracket)
3 Gy (Group I) 5 Gy (Group II) 8 Gy (Group III)
Day 1 Day 3 Day 5 Day 1 Day 3 Day 5 Day 1 Day 3 Day 5
Lipids (LDLs/VLDLs) 0.86, 1.30 – " "" – – "" " " ""Branched chain amino acid 0.94 (m) – " " – " "" " " ""Lactate 1.33 (d) – " " – " "" – " ""Alanine 1.48 (d) – " " – " "" – " ""Acetate 1.92 (s) – – – – – – – – –
Glutamine/glutamate 2.46 (m) – – " – – " – – "Choline 3.21 (s) – " " – – " – " ""Phosphoethanol
amine
3.23 (t) – " " – – " – – "
Betaine 3.25 (s) – " " – – "" – – ""Glucose 3.54 (m) – # ## – # ## # # ##
" indicates relative increase in signal; # relative decrease in signal; – no change. Keys: s: singlet; d: doublet; t: triplet; m: multiplet.
4 A. R. Khan et al.
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Ionising radiation generates reactive oxygen spe-
cies (R/OS) as a result of water radiolysis that induce
oxidative stress (Rousselot et al. 1997). These ROS
induce oxidative damage to vital cellular molecules
and structures including lipids, proteins and mem-
branes (Cadet et al. 2004). The increase in amount
of LDL, VLDL, lactate and choline in serum from
irradiated mice was commonly observed in 1H NMR
spectral and pattern recognition analysis. The rise in
the level of serum lipids and lipoproteins on day 5 in
all radiation dose denoted disturbance in lipid
metabolism. Lipoproteins (LDL, VLDL) are impor-
tant carrier proteins of tri acyl glycerol, cholesterol
and cholesteryl esters. Ionising radiation may affect
plasma lipoproteins by several possible mechanisms.
Radiation exposure could modify the interaction of
lipoproteins with their corresponding cell membrane
receptors (Feurgard et al. 1999). This reduced
activity for LDL clearance by the liver may con-
tribute to the marked accumulation of LDL in sera of
irradiated animals. Some earlier studies have shown
increased triacylglycerol levels in plasma due to
inhibition of lipoprotein lipase in small animals
irradiated with g rays (Dousset et al. 1984, Sedlakova
et al. 1986). Many earlier studies have shown
initiation of lipid peroxidation followed by radiation
exposure (Leyko and Bartosz 1986, Pathak et al.
2007). Radiation-induced lipid peroxidation of cell
membrane modifies membrane fluidity (Berroud
et al. 1996) and the activities of some membrane
enzymes (Yukawa et al. 1983). Membranal damage
results in release of phospholipids and choline
compounds as choline is the major head of phos-
pholipids. In our study, an increase in choline and
phosphocholine levels reflects an up-regulation of
synthesis of structural phospholipids to cope with the
demand of membrane resynthesis. Recently, a LC-
MS-based study has reported increased membranous
structure phospholipids and suggested phospholipid
profiles as a promising way to assess the radiation
exposure (Wang et al. 2009). Our results illustrate
changes in membrane metabolites, choline, and
lipoproteins due to radiation-induced oxidative
stress. Similarly, Lanz et al. (2009) have observed
GC-MS-based distinct radiation metabolomic phe-
notype derived from oxidative stress.
Figure 2. Score plots (PC1 vs. PC2) from PCA analysis of proton NMR spectra of serum from control (�), 3 (~), 5 (&) and 8 (.) Gy
irradiated groups at day 1 (a), 3 (b) and 5 (c) post irradiation. Ellipse indicates schematic representation to differentiate the cluster of groups.
Radiation-induced changes in serum by NMR spectroscopy 5
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Radiation-induced amino acid metabolism perturbations
The present study shows increased levels of BCA in
serum of irradiated mice as compared to controls.
Holecek et al. (2002a) have also reported increased
amino acid metabolism at 48 h time point post
irradiation. g-radiation induces degeneration of
skeletal muscle that results in the release of amino
acids from irradiated muscle into blood stream
(Schwenen et al. 1989). As a result of activated
protein breakdown induced by irradiation, BCA are
released from body proteins and extensively catabo-
lised. The amino group released during transamina-
tion of BCA is used primarily for synthesis of alanine
and glutamine (Chang and Goldberg 1978). Alanine
is an important precursor for gluconeogenesis in liver
during increased energy demand. To maintain the
levels of alanine for gluconeogenesis, BCA levels
were released in blood from liver for their catabolism
in skeletal muscle. The observed increase in amino
acid (BCA, alanine) on day 3 and 5 following
irradiation in all three groups reflected the conse-
quences of radiation-induced protein breakdown.
Glutamine acts as a nitrogen shuttle among organs,
an important fuel for rapidly dividing cells such as
erythrocytes and cells of the immune system and a
precursor for the synthesis of nucleotides (Holecek
2002b). However, glutamine was found to be
increased only on day five post irradiation. It shows
that glutamine resynthesis took little more time for
their release in blood stream.
Pattern recognition analysis provides a novel and
powerful method to analyse the data obtained from
NMR spectra after giving respective treatment
(Serkova and Niemann 2006). For classification of
data, PCA has been widely chosen as a preliminary
unsupervised pattern recognition tool to reduce data
dimensions originating from 1H NMR spectra. In
our study, PCA analysis showed both dose and time
dependent changes in the endogenous serum meta-
bolites. Mice treated with higher dose (8 Gy) showed
symptoms at day one post irradiation and could
easily be separated from controls through PCA
analysis. Group I started showing metabolic changes
only at day 3 post irradiation, whereas, group II
could be separated only at day 5 which could be dose
dependent. Similarly, changes observed in irradiated
animals were time dependent. Maximum changes in
all three groups were observed at day 5 post
irradiation, where all three irradiated groups could
be separated from controls at score plot.
Conclusions
From the above findings, it is demonstrated that 1H
NMR spectra of serum samples show metabolic
perturbations in mice after irradiation. In this study,
it is implied that 3, 5 and 8 Gy radiation doses induce
changes in body lipid, protein and membrane
metabolism. Based on these metabolic alterations,
irradiated group could be separated from controls by
NMR-PR analysis. Although the biochemical assays
could not be performed on our samples which could
have correlated better with our results, the study has
identified many earlier known radiation-induced
biochemical changes all together in one spectrum.
This is a basic and first study as per our knowledge to
explore the application of NMR spectroscopy for
studying radiation induced metabolic perturbations
Figure 3. Loading plots from analysis of proton NMR spectra of
serum samples from controls (.) and irradiated groups represent-
ing chemical shift positions corresponding to metabolites altered in
3 (D), 5 (&), and 8 (�) Gy radiation dose-irradiated mice at day 1
(a), 3 (b), and 5 (c) post irradiation.
6 A. R. Khan et al.
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in serum. NMR based metabonomics could be used
for development of metabolic markers and further be
extended for multiparametric approach for mass
screening and evaluation of radiation damage.
Declaration of interest: The authors report no
conflicts of interest. The authors alone are respon-
sible for the content and writing of the paper.
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Radiation-induced changes in serum by NMR spectroscopy 7
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ORIGINAL ARTICLE
NMR spectroscopy based metabolic profiling of urine and serumfor investigation of physiological perturbations during radiationsickness
Ahmad Raza Khan • Poonam Rana • Ritu Tyagi •
Indracanti Prem Kumar • M. Memita Devi •
Salim Javed • Rajendra P. Tripathi • Subash Khushu
Received: 2 October 2010 / Accepted: 7 January 2011
� Springer Science+Business Media, LLC 2011
Abstract Radiation accidents are rare events that induce
radiation syndrome, a complex pathology which is difficult
to treat. In medical management of radiation victims, life
threatening damage to different physiological systems
should be taken into consideration. The present study was
proposed to identify metabolic and physiological perturba-
tions in biofluids of mice during different phases of radiation
sickness using 1H nuclear magnetic resonance (1H NMR)
spectroscopy and pattern recognition (PR) technique. The1H NMR spectra of the biofluids collected from mice irra-
diated with 5 Gray (Gy) at different time points during
radiation sickness were analysed visually and by principal
components analysis. Urine and serum spectral profile
clearly showed altered metabolic profiles during different
phases of radiation sickness. Increased concentration of
urine metabolites viz. citrate, a ketoglutarate, succinate,
hippurate, and trimethylamine during prodromal and clini-
cal manifestation phase of radiation sickness shows altered
gut microflora and energy metabolism. On the other hand,
serum nuclear magnetic resonance (NMR) spectra reflected
changes associated with lipid, energy and membrane
metabolism during radiation sickness. The metabonomic
time trajectory based on PR analysis of 1H NMR spectra of
urine illustrates clear separation of irradiated mice group at
different time points from pre dose. The difference in NMR
spectral profiles depicts the pathophysiological changes and
metabolic disturbances observed during different phases of
radiation sickness, that in turn, demonstrate involvement of
multiple organ dysfunction. This could further be useful in
development of multiparametric approach for better evalu-
ation of radiation damage as well as for medical manage-
ment during radiation sickness.
Keywords Radiation sickness � 1H NMR spectroscopy �Serum � Urine � Metabonomics
1 Introduction
In the present scenario, increasing burden of nuclear arsenal
and scramble of nuclear power leads to a big threat of radi-
ation exposure to the population at large. In all potential
radiation disasters, we are likely to encounter whole body or
partial body radiation exposure. Radiation sickness occurs
after whole body or significant partial body irradiation of
greater than 1 Gray (Gy) radiation dose (Waselenko et al.
2004). It is a sequence of phased symptoms beginning with
prodromal phase of non specific clinical response spanning
from few hours to a few days, followed by symptom free
latent phase lasting a few days or weeks depending upon the
radiation exposure dose. Clinical symptoms reappear during
illness manifestation phase which may last for weeks and
survivability of a radiation exposed person depends on the
recovery in this phase. A dose dependent latent period occurs
between the end of the prodromal phase and the onset of later
haemopoietic or gastrointestinal complications (AFFRI
2003). Therefore, regular monitoring in illness phase is
essential for clinical management. During management of
A. R. Khan � P. Rana � R. Tyagi � M. M. Devi �R. P. Tripathi � S. Khushu (&)
NMR Research Centre, Institute of Nuclear Medicine and Allied
Sciences (INMAS), DRDO, Lucknow Road, Timarpur, Delhi,
India
e-mail: [email protected]
I. P. Kumar
Division of Radiation Biosciences, Institute of Nuclear Medicine
and Allied Sciences (INMAS), Delhi, India
S. Javed
Department of Biochemistry, Jamia Hamdard, New Delhi, India
123
Metabolomics
DOI 10.1007/s11306-011-0277-4
victims of radiological accidents, besides evaluating global
radiation dose received by biological dosimetry, radiation
induced damage to different physiological systems should
also be taken into consideration. In the last few years, new
concept of radiation pathophysiology has been proposed that
involves radiation induced multi-organ involvement (RI-
MOI) and radiation induced multi-organ failure (RIMOF).
Both RIMOI and RIMOF contribute to the clinical outcome
and prognosis of radiation accident victim (Fliedner et al.
2005; GenYao and Changlin 2005). Few bio indicators for
radiation induced damage to the physiological system
(Becciolini et al. 1984; Prat et al. 2006; Lutgens et al. 2004)
are available in literature. Thus there is a crucial need to
obtain information from various metabolic, cellular and
molecular levels of radiation damage during all phases of
radiation sickness. In this scenario, high-throughput non-
invasive studies are required to develop multiparametric
approach with strong prognostic capabilities which could
provide adequate information for subsequent medical man-
agement and treatment decisions (Reeves et al. 1996).1H nuclear magnetic resonance (1H NMR) spectroscopy
is rapidly evolving as a tool in system biology for moni-
toring metabolic fluxes in toxicological studies in small
animals. (Liao et al. 2007; Wei et al. 2008; Wang et al.
2006; Waters et al. 2006). It is well established that nuclear
magnetic resonance (NMR) technique, coupled with pat-
tern recognition (PR) methods, can provide valuable
information on biochemical perturbations due to both
exogenous and endogenous factors by analysis of biofluids
(Waters et al. 2006; Holmes et al. 2008). Serum and urine
samples provide a well established surrogate medium for
the study of metabolic physiological functions of not only
liver and kidney, but also for other vital organs. Earlier
studies in the field of radiation metabolomics have shown
time and dose dependent changes due to acute radiation
stress in animal model and cell system (Tyburski et al.
2008; Lanz et al. 2009; Patterson et al. 2009; Wang et al.
2009; Khan et al. 2010). However, metabolic changes
during different phases of radiation sickness are yet to be
elucidated. The present study has been designed to assess
physiological perturbations in urine and serum during dif-
ferent phases of radiation sickness using 1H NMR spec-
troscopy based metabonomics.
2 Materials and methods
2.1 Animal handling, radiation exposure and sample
collection
Twenty strain ‘A’ male mice of 10 weeks of age were
taken and acclimatized for 48 h in polypropylene cages
prior to group allocation and treatment. They were then
housed individually in metabolic cages in a well-ventilated
room with controlled conditions. During the study, room
temperature was maintained within 19–23�C, relative
humidity within 45–65%, and fluorescent lighting was
provided (6 a.m. to 6 p.m.) for 12 h light/12 h dark cycle.
Mice kept in pi cage were irradiated with 5 Gy of radiation
through gamma irradiation facility at our institute
employing 60Co [Gamma Cell-220, Atomic Energy of
Canada Limited (AECL), Ottawa, Ontario, Canada] with
source operating at 0.20 Gy/min. A dose of 7 Gy in mice is
generally considered to be equivalent to 4 Gy on humans
(Hall and Giaccia 2006). Thus the dose we used was
roughly equivalent to 2.5 Gy on humans and this dose is
considered to be associated with haemopoietic syndrome
with some gastrointestinal symptoms. A summary of
symptoms appearing at different phases of acute radiation
syndrome are given in Table 1.
Urine samples from mice were collected in metabolic
cages. To reduce contamination, mice were placed in clean
cages and 0.1% sodium azide was added in urine collection
tube. To look for metabolic changes during different phases
of radiation sickness, several time points were selected for
sample collection viz. 6 h and day 5 post irradiation for
prodromal phase, day 10 and 15 as latent phase and day 20
and 25 as clinical manifestation phase. For blood collec-
tion, only one time point from each phase of radiation
sickness was selected. Animals (n = 5 at each time point)
were sacrificed and blood was collected through heart
puncture at pre dose, day 5, 10 and 25 post irradiation.
Serum was separated by centrifugation at 2,6659g for
10 min. All samples were stored at -80�C until 1H NMR
spectroscopic analysis was carried out.
2.2 Sample preparation and NMR spectroscopy
All chemicals, NMR solvents, trimethylsilyl-2,2,3,3-tetra-
deuteropropionic acid (TSP) and deuterium oxide (D2O)
used in the study were obtained from Sigma-Aldrich (St
Louis, MO, USA). Animal handling and experimental
protocols adopted in this study were approved by the
Animal Ethical Committee of Institute.
2.2.1 1H NMR spectroscopy measurement of urine
Deuterated phosphate buffer solution (400 ll; 0.2 M
Na2HPO4/0.2 M NaH2PO4, pH 7.4 containing 1 mM TSP
prepared in D2O) was mixed with 200 ll of urine to min-
imize variations in pH of the urine samples. TSP acted as
chemical shift reference (d0.0 ppm) and D2O provided a
lock signal. Samples were then centrifuged at 4,7229g
for 5 min to remove particulate matter and then transferred
to 5 mm NMR tube. NMR spectral data were acquired on
a Bruker-Av400 spectrometer (Bruker, Rheinstetten,
A. R. Khan et al.
123
Karlsruhe Germany) with Broad Band Observe (BBO)
probe operating at a frequency of 400.13 Hz and a tem-
perature of 298 K. Water signal was suppressed using
water presaturation pulse; nuclear overhauser enhanced
spectroscopy (NOESYPR1D) pulse sequence (RD-900-t-
900-tm-900-acq) with relaxation delay (RD) of 2.0 s and an
acquisition time (acq) of 2.5 s was used. Typically, 64 free
induction decay (FID) were collected into 32 K data points
over a spectral width of 6410 Hz.
2.2.2 1H NMR spectroscopy measurement of serum
Serum sample of 200 ll was mixed with 400 ll of D2O
and transferred to 5 mm NMR tubes containing 1 mM TSP
as reference in closed capillary (Wilmad, SP Industries, NJ,
USA). All NMR spectra were acquired at 400.13 MHz on
Bruker-AV400 spectrometer (Bruker, Rheinstetten, Kar-
lsruhe, Germany) at 298 K. Water suppressed Carr–Pur-
cell–Meiboom–Gill (CPMG) spin echo pulse sequence
(RD-900-(s-1800-s)n-acq) with a total spin echo (2ns) of
200 ms was used to attenuate broad signals from proteins
and lipoproteins. Sixty-four FID were collected into 32 K
data points over a spectral width of 8223.68 Hz, with a RD
of 2 s and acq of 3.98 s.
Each FID was weighted by an exponential function with
a 0.3-Hz line broadening factor prior to Fourier transfor-
mation and peaks were assigned on the basis of chemical
shifts according to previously reported literature (Lindon
et al. 1999).
2.3 Data reduction and PR analysis of 1H NMR spectra
All the spectra were phase and baseline corrected and
calibrated (TSP at 0.0 ppm, 1 mM) using TopspinTM
(Bruker, Karlsruhe, Germany). Each 1H NMR spectrum
from urine and serum over the range (d0.2–10.0 ppm) was
reduced to 245 regions of equal width (0.04 ppm) and
signal intensity in each region was integrated using AMIX
software (Bruker, Karlsruhe, Germany). The region
between d4.5 and 5.0 ppm was removed prior to any sta-
tistical analysis in order to elude any spurious effects of
variability in the suppression of water resonance. For urine
spectra, the region containing urea (d5.0–6.0) was also
excluded to eliminate any cross-relaxation effects of urea.
Following removal of these regions, data was normalized
in AMIX by dividing each integrated segment by the total
area of the spectrum to reduce any significant concentration
difference. Output data in ASCII data format was imported
to Microsoft Excel (Microsoft Office 2003), mean centered
and then exported to Matlab 7.1 (MathWorks, MA, USA)
for PR analysis.
Principal component analysis (PCA) was performed for
pre dose and all time points post irradiation urine and
serum samples. PCA plots of first two components
allowed visualisation of the data and to establish whether
there were any time dependent changes in the metabolic
profile of urine or serum post irradiation.Variation
between samples can be detected in the score plots,
whereas spectral region responsible for the differences
can be viewed in the corresponding loading plots. These
spectral regions were examined and potential metabolites
were identified and integrated. Additionally, to calculate
relative changes in identified metabolites during different
phases of radiation sickness, relative concentration of
each identified metabolite in relation to the total spectral
integral area, subsequent to removal of water resonance,
was determined and one way analysis of variance
(ANOVA) and multi comparison test was performed in
MATLAB. The score values from PCA were subjected to
ANOVA to test significant difference between pre and
post irradiation samples.
Mean values of principal component (PC) were calcu-
lated for urine samples at each time point and plots of PC1
versus PC2 for the mean data were constructed. These
maps gave information about the metabolic trajectory
through different phases of radiation sickness.
3 Results and discussion
Radiation incidents are relatively rare events; however, the
consequence of accidental radiation exposure can be
Table 1 Symptoms of acute
radiation syndrome during
exposure of whole body
radiation in the range of 2–6 Gy
of radiation dose
Different phases of radiation
sickness
Symptoms
Prodromal phase Haemopoietic changes: Development of lymphopenia,
granulocytopenia
Gastrointestinal symptoms: Headache, nausea vomiting and diarrhea
Neuromuscular symptoms: Easy fatiguability, fever, headache
Latent phase Pancytopenia and predisposition to infection
Manifest illness phase State of intense immunosuppression
Lymphopenia, opportunistic infections
Haemopoietic and mucosal system affected
Study of radiation sickness by NMR spectroscopy
123
extensive, both physically and physiologically. New
approaches and technologies are available for the study of
health impairments as a function of dose of whole body
irradiation at different organ levels. In this study, we have
used radiation metabonomics based on 1H NMR spectros-
copy to demonstrate radiation induced metabolic or phys-
iological perturbations during different phases of radiation
sickness.
3.1 1H NMR spectroscopic analysis of urine and serum
Typical 1H NMR spectra of urine samples obtained from
irradiated mice at various time points are illustrated in
Figs. 1 and 2. Both types of biofluids contained lactate,
alanine, glutamine, glutamate and alanine. Metabolites like
hippurate, taurine, trimethyl amine (TMA), a-ketoglutarate
(a-KG) and 2-ketoisocaproate that are unique to urine
metabolic profile, were present in urine 1H NMR spectra
amongst others. NMR spectral profile of serum was char-
acterised by predominance of various lipids along with
resonances from creatine, several amino acids and organic
acids.
A number of perturbations in endogenous metabolites
were observed in the 1H NMR spectra of urine samples
collected at various time points post irradiation (Table 2).
Changes were observed mainly in metabolites associated
with energy metabolism (succinate, a-KG, citrate), amino
acids (branched chain amino acids, isoleucine, phenylala-
nine, taurine), gut flora metabolites [hippurate, TMA],
osmolytes (betaine, sarcosine) and creatinine in urine
samples. Figure 3 summarises the relative changes in dif-
ferent metabolites through different phases of radiation
sickness. A dramatic change in metabolic profile occurred
during 6 h post irradiation with significant increase in
almost all metabolites. Continued increase of most of the
metabolites was observed in 1H NMR spectra of urine
samples at day 5. The shift in metabolite changes in irra-
diated animals then turned back to pre dose values at day
10, post irradiation. Thereafter, levels of a-ketoglutarate,
citrate, succinate, trimethylamine and other associated
metabolites of gut flora increased again during day 15, 20
and 25 post irradiation. On the other hand, changes
observed in serum metabolic profile during prodromal and
clinical manifestation illness phase was mainly in lipids,
branched chain amino acid and lactate (Table 3). More-
over, membrane metabolites viz., choline and phospho-
ethanolamine was increased only during day 5 post
irradiation (prodromal phase).
Fig. 1 Comparative 1H NMR urine spectra from irradiated mice at different time points
A. R. Khan et al.
123
3.2 PCA of urine and serum
All urine and serum samples collected at all the time points
of the study were assessed using PCA analysis to investi-
gate time dependent effect of radiation over 25 days of
experimental duration. PCA proved to be a useful and rapid
means of establishing whether the urine spectra obtained
from irradiated mice were different and also identifying at
which time point the maximum biochemical changes have
occurred. A pair wise day to day comparison by PCA can
provide more detailed information on the onset of different
phases of radiation sickness. Score plot of NMR spectra of
urine samples collected during different post irradiation
time point revealed clear separation between pre-dose and
post dose time points (Fig. 4a–f). However, on day 10, post
irradiation, overlapping of score values with pre dose
values suggested that there were no significant changes in
the urine metabolic profile at this time point. PCA score
values calculated at different time points were used to plot
metabolic trajectory, a method of visualising changes in
metabolic profiles with time. PCA analysis based time
trajectory was able to differentiate amongst various phases
of radiation sickness based on physiological perturbations
observed in NMR spectra of urine samples from irradiated
animals. The mean score plots for the first two PCs at each
time point has been shown in Fig. 4g. The trajectory of
irradiated sample moved away from the control or pre dose
position along PC1 axis as early as 6 h and continued till
day 5. Irradiated animals turned back towards pre dose
time point that could be visualised by the close proximity
of day 10 score values to pre dose score. From day 10
onwards, trajectory moved away from pre dose point and
attained maximum shift by the end of the experimental
duration (day 25). In case of serum, aliphatic region
(0.5–4.5 ppm) containing most endogenous metabolite
signals in serum were chosen for PCA analysis. Figure 5
represents score plots on first two PCs of 1H NMR spectra
from pre dose serum samples and samples from irradiated
mice collected on day 5, 10 and 25 post irradiation. Clear
separation of day 5 and day 25 serum samples from pre
dose samples showed radiation induced changes during
prodromal and manifest illness phase respectively. In the
score plot of NMR spectra of serum samples, overlapping
of score values of NMR spectra from serum sample col-
lected on day 10 with pre dose time point sample values
suggest latent phase of radiation sickness. PCA was repe-
ated on group mean data in order to simplify the map and
to establish a biochemical trajectory of effect. The time
Fig. 2 Representative serum 1H NMR spectra from irradiated mice at pre dose, day 5, 10 and 25 post dose
Study of radiation sickness by NMR spectroscopy
123
course of radiation induced changes in serum is shown in
Fig. 5. The metabolic perturbations during radiation sick-
ness phase based on PC loading values and statistical
analysis of spectral regions as described in methods were
characterised by increasing branched amino acids, lactate,
alanine and betaine at day 5 post irradiation. However, no
Table 2 Summary of NMR spectroscopy based radiation induced variations in urine metabolites as compared to pre dose values (identified
based on PCA loading values)
Metabolites Chemical shift with multiplicity (bracket) Prodromal phase Latent phase Manifestation illness phase
6 h Day 5 Day 10 Day 15 Day 20 Day 25
b-Hydroxybutyrate 1.20 (d), 2.31, 2.41 and 4.16 (ABX) : – – – – –
a-Ketoglutarate 2.45 (t), 3.01 (t) :: : – : : :
Succinate 2.41 (s) :: : – : : :
Citrate 2.55 (AB), 2.67 (AB) :: : – : : :
Trimethylamine 2.88 (s) : : : : – :
Creatinine 3.05 (s), 4.06 (s) – : – – – –
Choline 3.21 (s), 3.52 (m) : – – – – –
Betaine 3.27 (s) ; : – – – –
Taurine 3.25 (t), 3.43 (t) – : : : – –
Acetoacetate 2.30 (t), 3.45 (s) : : – – – :
Sarcosine 2.74 (s), 3.60 (s) – : – : – :
Ascorbate 3.74 (d), 3.76 (d), 4.03 (m), 4.52 (d) : : – : : :
Trans-aconitate 3.48 (s), 6.62 (s) : : : : – –
Phenylalanine 3.28 (m), 7.33 (m), 7.38 (m), 7.43 (m) : : – – : :
Hippurate 3.97 (d), 7.55 (t), 7.64 (t), 7.84 (d) – : – : : :
:, indicates relative increase in integral value for the region containing the selected metabolite; –, no change in integral value for the region
containing selected metabolite; ;, indicates relative decrease in integral value for the region containing the selected metabolite. P values for the
changing metabolites were assessed using ANOVA in MATLAB based on the integrals of the selected peaks and were all less than 0.05 levels
s singlet, d doublet, t triplet, m multiplet
Fig. 3 Relative changes in levels of selected metabolites in the
spectra of urine (a–d) and serum (e–f) through different time points of
radiation sickness. Data presented as relative levels with respect to
total spectral area ± standard deviation, with overall differences
between all groups (P \ 0.05) and post hoc tests (P \ 0.05) revealing
a difference from pre dose level
A. R. Khan et al.
123
marked changes could be seen on day 10 post irradiation
(latent phase). During manifest illness phase (day 25) of
study, there was reappearance of increased levels of lipids,
alanine and branched amino acid in NMR spectra of serum.
Our findings corresponded well with different phases of
radiation sickness.
Prodromal phase of radiation sickness is associated with
immediate effect of radiation exposure and lasts for few
hours to few days depending on absorbed radiation dose.
During this acute phase of radiation sickness, most of the
metabolites in serum and urine were found to be increased
after sub lethal dose of whole body radiation. However,
Table 3 Summary of NMR
spectroscopy based radiation
induced variations during
different time points in serum
metabolites as compared to pre
dose values
Metabolites Chemical shift with
multiplicity (bracket)
Day 5 Day 10 Day 25
Lipids (LDLs/VLDLs) 0.86, 1.30 : – ::
Branched chain amino acid 0.94 (m) : – :
Lactate 1.33 (d) : – :
Alanine 1.48 (d) : – :
Acetate 1.92 (s) – – –
Choline 3.21 (s) : – –
Phosphoethanolamine 3.23 (t) : – –
Betaine 3.25 (s) :: – :
Fig. 4 PCA score plots (a–f) based on 1H NMR urine spectra at 6 h,
day 5, 10, 15, 20 and 25 post irradiation, respectively (filled circlepre-dose, open circle post dose). PCA metabolic trajectory plot
(g) summarising the changes in the NMR visible metabolome through
different phases of radiation sickness
Study of radiation sickness by NMR spectroscopy
123
most of the changes observed in urine were Kreb’s cycle
intermediates. These and other energy metabolites repre-
sent bioenergetic status of the body and might have
resulted from increased energy demands and were, there-
fore, suggestive of changes in energy metabolism after
radiation exposure (Lerman et al. 1962). Dose dependent
acute effects of radiation showing altered membrane and
energy metabolism in serum have been reported in our
earlier study (Khan et al. 2010). In this study, highest
increase in the energy intermediates was observed at 6 h
post dose in urine samples. Increased a-keto-glutarate,
succinate and citric acid could also be due to the effect of
radiation on renal tubular physiology. It has been earlier
reported in the literature that whole body radiation causes
depression of tubular secretion and reduces glomerular
filtration in kidney cells (Judas et al. 1997), as a result of
which these metabolites are released in more quantity in
urine. Moreover, mitochondria have long been considered
as direct intracellular target of ionizing radiation which in
turn results in inhibition of citric acid cycle enzyme
(Kergonou et al. 1981). Due to inhibition of these enzymes,
these metabolites might be under utilised in renal tubular
cells and this could have resulted in release of these
metabolites in urine of irradiated mice. Inhibition of aer-
obic mitochondrial enzyme or metabolism is also sup-
ported with the presence of increased lactate in serum
NMR spectra of irradiated mice. Therefore, changes
observed in energy intermediates at 6 h post dose could be
cumulative expression of both disturbed energy metabo-
lism due to increased energy demands as well as altered
renal tubular function.1H NMR spectra of serum from irradiated mice showed
radiation induced oxidative stress related changes in the
form of increased choline compounds. Ionizing radiation
generates reactive oxygen species (ROS) as a result of
water radiolysis that induce oxidative stress (Rousselot
et al. 1997). These ROS induce oxidative damage to vital
cellular molecules and initiate lipid peroxidation (Cadet
et al. 2004). Membranal damage due to lipid peroxidation
results in release of phospholipids and choline compounds
as choline is the major head of phospholipids. In our study,
increase in choline and phosphocholine levels in NMR
spectra of serum at day 5 reflects an up-regulation of
synthesis of structural phospholipids to cope with the
demands of membrane resynthesis. However, this altered
membrane metabolism was restricted to only prodromal
phase, since most of the changes occurring in this phase are
due to radiation induced oxidative stress.
Ionizing radiation is said to cause oxidative damage to
tissues and a few earlier studies have reported radiation
induced liver and kidney injury (Jindal et al. 2006; Sharma
et al. 2006; Rana et al. 2009). In our study, radiation
induced changes in lipid metabolism were also observed in
the form of increased lipoproteins viz. low density lipo-
protein and very low density lipoprotein (LDL and VLDL
respectively) in serum 1H NMR spectral analysis. Signifi-
cant increase in the levels of serum lipid profile and LDL
are demonstrated 5 days post irradiation possibly as a
result of liver injury which is in agreement with previous
studies in Syrian hamster (Feurgard et al. 1999) and mice
(Agrawal et al. 2001). This indicates that ionizing radation
induced oxidative stress might alter hepatic lipid metabo-
lism and serum lipoproteins. Radiation induced liver injury
has also been reflected as increased taurine signals in urine
metabolic profile in our study. Taurine is considered as
urinary biomarker for liver injury (Waterfield et al. 1993;
Beckwith-Hall et al. 1998; Clayton et al. 2003) and its level
was increased during prodromal phase which continued to
increase till day 15. Increased urinary taurine is generally
observed in fatty liver and in our study liver steatosis was
observed in histological studies on liver tissue obtained on
day 5 from mice irradiated with a radiation dose of 5 Gy
(unpublished observations).
Acute radiation sickness involves gastrointestinal
symptoms that include diarrhoea (Table 1). Gastrointesti-
nal symptoms during radiation sickness could be due to
radiation induced dysmotility of intestine, denudation of
villi and loss of epithelial lining that could be associated
with bacterial overgrowth (Macnaughton 2000; Somsoy
et al. 2002). Bacterial overgrowth during radiation infec-
tion might be related with disturbed gut flora metabolism.
Gut microbiota extensively catabolise proteins and aro-
matic amino acids such as hippurate, phenylacetylglycine,
phenylalanine, tyrosine and tryptophan. These species are
present in urine as products of intestinal microflora
Fig. 5 A plot of PC1 versus PC2 based on 1H NMR integral region
for individual serum samples at pre dose (filled circle), day 5 (filledsquare), 10 (open square) and 25 (open circle) post dose obtained
from irradiated mice and mean data of samples (cross) showing time
related trajectory
A. R. Khan et al.
123
metabolism. Disturbed gut flora metabolism is directly
reflected in urine NMR spectral profile as increased TMA,
hippurate, phenylalanine and other aromatic amino acid
signals. TMA is an indicator of methylamine metabolism.
Methylamines are important osmo-regulatory compounds
and are produced via degradation of dietary choline to
TMA and its di and mono amine metabolites by gut flora
(Martin et al. 2008). In our study, increased levels of TMA
might be attributed to altered intestinal bacterial metabo-
lism. The increased levels of urinary phenylalanine and
phenylacetylglycine related compounds and hippurate also
suggest radiation induced effects on the gut flora because
their precursors, benzoic acid and phenylacetic acid are
produced by bacterial metabolism.
Maximum radiation induced changes appeared during
prodromal phase as radiation induced oxidative stress lasts
mainly in this phase. In latent phase, reversal of most of the
changes occurring during prodromal phase to normal could
be due to repair mechanism occurring simultaneously in
the body. However, changes started reappearing from day
15 onwards in manifest illness phase and reappearance of
these changes during clinical manifestation illness phase
could be associated with immunosuppressed state of the
body during lymphocytopenia or other changes in haemo-
poietic and gastrointestinal system during prodromal phase.
Although, these changes in metabolic profile were not as
high as observed in prodromal phase of radiation sickness.
In our study, most of the changes during late phase pertain
mainly to gut flora and energy metabolism suggesting
disturbed gastrointestinal symptoms and opportunistic
infection due to immunosuppresion of the body.
Our NMR based spectral profiling of biofluids has
identified changes in organal and physiological functioning
at different phases of radiation syndromes. In recent years,
new concept of radiation pathophysiology has been pro-
posed that involves multi organ injury, multi organ dys-
function or multi organ failure and marked involvement of
lung, kidney, liver and other organs in addition to acute
radiation syndrome (Fliedner et al. 2005; Waselenko et al.
2004). Although we have not observed clinical parameters
of liver, kidney or other organ dysfunction, our results
suggest patho-physiological changes leading to multi organ
dysfunction syndrome. Consequently, it could be proposed
that an underlying radiation induced multi organ dysfunc-
tion syndrome should be evaluated irrespective of radiation
dose exposure.
4 Conclusions
The application of metabolomics in radiation casualty
management and monitoring is still in its infancy. How-
ever, information provided using metabolomics will
nonetheless aid in medical diagnostic practices during
radiation accident. Results of the present study clearly
showed metabolic changes during different phases of
radiation sickness. These changes could be the conse-
quence of radiation induced damage to physiological sys-
tem leading to multi organ dysfunction. Such studies will
not only help in medical management during radiation
accident but also beneficial for patients undergoing cancer
treatment using ionizing radiation.
Acknowledgments This work was peformed as part of DRDO
sponsored R & D project INM 308. The aurhors are grateful for the
financial support from Defence Research & Development Organisa-
tion (DRDO), Ministry of Defence, India.
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