purification of cells preparation of gradient solutions from general purpose media
TRANSCRIPT
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Purification of cellsPurification of cells
Preparation of gradient Preparation of gradient solutions from general solutions from general
purpose mediapurpose media
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• Diatrizoate
• Nycodenz®
• Iodixanol
Axis-Shield Iodinated Density Axis-Shield Iodinated Density Gradient Media (General Purpose) Gradient Media (General Purpose)
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II
I
CH3COHN NHCOCH3
COOHDiatrizoic acid (MWt 614)Hypaque
Axis-Shield Density Gradient Media I
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Nycodenz (MWt 821)CONHCH2 CHCH2 OH
OH
NCH2 CHCH2 OH
OHCO
CH3
CHCH2 NHCO
CH2 OH
OH
II
I
Axis-Shield Density Gradient Media II
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CONHCH2 CHCH2 OH
OH
CONHCH2 CHCH2 OH
OH
NCH2 CHCH2 N
OHCO CO
CH3 CH3
CHCH2 NHCO CONHCH2 CH
CH2 OH CH2 OH
OH OH
I
I
II
I
I
Iodixanol (MWt 1550)
Axis-Shield Density Gradient Media III
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• Polysucrose
• MWt approx 450,000
Axis-Shield Density Gradient Media (General Purpose)
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Concentration (% w/v)
Density (g/ml)
0 10 20 30 40 50 601
1.1
1.2
1.3
SucrosePolysucrose
Nycodenz®Iodixanol
Density versus concentration
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Use of density barriers I
1.06 g/ml
1.05 g/ml 1.07 g/ml 1.10 g/ml
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1.06 g/ml
1.05 g/ml 1.07 g/ml 1.10 g/ml
Use of density barriers II (mixer)
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1.05 g/ml 1.07 g/ml 1.10 g/ml
1.07 g/ml
1.06 g/ml
Barrier flotation strategy III
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Axis-Shield Density Gradient Axis-Shield Density Gradient Media for CellsMedia for Cells
• Diatrizoic acid powder
• Nycodenz® powder
• OptiPrep™: a sterile 60% (w/v) solution of iodixanol in water, density = 1.32 g/ml
Principal competition: Percoll®
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Concentration (% w/v)
Density (g/ml)
0 10 20 30 40 50 601
1.1
1.2
1.3
SucrosePolysucrose
Nycodenz®Iodixanol
Density versus concentration
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SucrosePolysucrosePercoll®
Nycodenz®
Iodixanol
Concentration (% w/v)
Osmolality (mOsm)
0 10 20 30 40 50 600
200
400
600
800
1,000
Osmolality versus concentration
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Isoosmotic solutions: cells (C01)Isoosmotic solutions: cells (C01)
• Nycodenz®: Dissolve 27.6 g powder in 3 mM KCl 5mM Tricine/HEPES buffer ( = 1.15 g/ml); make further dilutions with buffered saline, culture medium etc.
• Iodixanol: Dilute OptiPrep™ with buffered saline, culture medium etc.
• Percoll®: first mix 9 vol. with 1 vol. of 10X saline
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• Synthesised as X-ray imaging agents
• Diatrizoate, Nycodenz® and iodixanol have been clinically tested as X-ray imaging agents Produced under pharmacological conditions: FDA and EU cGMP compliance
• Endotoxin: <1 EU/ml (European standard)
• Endotoxin: measured levels <0.13 EU/ml
Axis-Shield Density Gradient Media
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What is endotoxin?
• Endotoxin is a heat-resistant pyrogen (sometimes called lipopolysaccharide), which is released by Gram-negative bacteria.
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What are the effects of endotoxin in vivo?
• A variety of inflammatory responses
• Hypotension
• Changes to leukocyte populations
• Intravascular coagulation
• Shock
• Death
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What are the effects of endotoxin in vitro?
• Interacts with CD14 and other receptors
• Causes cytokine production in monocytes and macrophages
• Activates complement and coagulation cascades
• Acts as a B cell mitogen
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Percoll® problems I
• High levels of endotoxin (6-60 EU/ml)
• Some free polyvinylpyrollidone (PVP)
• PVP toxic to cells
• More expensive versions with reduced endotoxin levels or PVP-free
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Is Percoll® innocuous to cells? Wakefield, J.S. et al (1982) Biochem. J. 202, 795-797
• Peritoneal macrophages, rat liver Kupffer cells, rat testis Leydig cells ingest large numbers of colloidal silica particles at room temperature
• Colloidal silica particles adhere to cell surface at all temperatures
• Affects adherence of macrophages
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Percoll® problems: II
• Toxicity to Type II lung pneumocytes: Viscardi RM et al (1992) Exp. Lung Res., 18, 225-245
• Poor recoveries of gastric parietal cells; stimul-ation of acid and cAMP secretion: Benn, SE et al (1987) J. Physiol. 391, 9P
• Toxicity to progenitor cells: Mayanagi, T et al (2003) Reproduction, 125, 667-675
• Adherence of silica to erythrocytes causes progressive haemolysis: Kamiyama M. (2002)
Personal communication
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Percoll® problems: III
• Poor recovery and function of soil bacteria: Robe, P et al (2003) Eur. J. Soil Biol., 39, 183-190
• Poor viability of plasmodium: Carter, EH et al (1987) Parasitology, 95, 25-30
• Poor yield and purity of intracellular bacteria: Henriquez, V. et al (2003) Appl. Environ. Microbiol., 69, 6268-6271
• Phagocytosed by sea urchin cells: Gross, PS et al (2000) Immunogenetics, 51, 1034-1044