re digests & re maps od and uses last class how to read a paper intro to paper 1

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RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

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Page 1: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

RE digests & RE maps

OD and uses

Last class

How to read a paper

Intro to Paper 1

Page 2: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Purifying proteins

Purification – based on what properties?

Page 3: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Purifying proteins - Solubility

[Salt]

Fract

ion

pro

tein

in p

reci

pit

ate

+

+++

----

+

+++

----+

+++

----

+

+++

----

Page 4: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Ammonium sulfate precipitation

Page 5: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Getting rid of salt: Dialysis

Page 6: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Ammonium sulfate precipitation

0-40%40-60%60-80%

Bradford assay & enzyme assay (why)?

- Every fraction

Lab

Dialysis

Page 7: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

First evidence of PA-GFP…

Page 8: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Increase in fluorescence of PA-GFP…

Page 9: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

pH affects

Page 10: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Photostability

Page 11: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

OK – what about in cells?

Page 12: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Can we study dynamics?

Page 13: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Lets do a real experiment – live trafficking

Page 14: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Following live trafficking of proteins

Page 15: RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1

Lysosomal trafficking needs microtubules