research electronic data capture · support model 1.5fte : 10,016 projects : 11,633active users 1-2...
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Research Electronic Data CaptureData Management and Survey Tool
http://catalyst.harvard.edu
Lynn Simpson, MPHResearch Analytics & Data Service ManagerPartners HealthCare | Enterprise Research Infrastructure & Systems Harvard Catalyst | The Harvard Clinical and Translational Science Center
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Partners Research Information Services & Computing
Tools, apps, & servicesSecure infrastructure
Example Research Workflow:
@phseris
Set-up Study/Lab
Feasibility/Design
Collect Data
Collaborate
ManageData
Analyze Data
RPDR Query Tool
REDCap
LimeSurvey
StudyTRAX
RPDR
Biobank
File Sharing
Mailing List System
Freezerworks
Computational Resources
Research Computing
Core Facility
File Storage
Archival Storage
Purchasing
Website & Server Hosting
Desktop & Mobile Services
Remote Access
Team Collaboration
Databases & Data Services
Desktop Backup
Bioinformatics Data Processing
Medical Image Processing
Statistics, Analysis & Visualization
Big Data Analytics & Machine Learning
Biobank Portal
FREE license from Vanderbilt U. Medical CenterREDCap Consortium = 2309 Institutions, 108 Countries
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http://project-redcap.org/
Overview
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Free,Licensed from Vanderbilt U. Medical Center
Secure,Hosted by PHS IS Research Computingo No purchasing, downloading software, or storing data locally
Web-based applicationo PC and Mac compatible o Mobile device, Smart-phone friendlyo Accessible via internet (no VPN, remote access required)o Compatible with all popular web browsers
Safari, Internet Explorer, Chrome, Firefox…
Fully customizable - You are in total control of shaping your database or survey. Define:
§ Question / Field types§ Validation for text fields (dates, numbers, ranges) § Calculations§ Branching logic: hide/display fields based on data entered§ Piping: display data entered across forms / visits
§ No limit to number of data fields or forms you can program
Mid-study modifications - Modify projects as needed during the course of your study.
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Overview
Support Model
1.5 FTE : 10,016 Projects : 11,633 Active Users1-2 Business Days for most responses2-5 Business Days for some [email protected]
Self Service Module:• Help & FAQ • Getting Started website: http://rc.partners.org/redcapgettingstarted• Knowledgebase: Guidelines, How-To Articles, Feature Highlights.
Test site: http://redcap-training.dipr.partners.org/redcap/This is open access to internal Partners users - do not enter real
research or clinical study data.
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Online Form Editor
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Q: How much experience with programming, networking and/or database construction is required to use and design EDC tools in REDCap?
A: No programming, networking or database experience required.
Use Point-and-Click interface to design your EDC tool(s).
Database Design: Data Dictionary
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Or use “Off-line” Excel .csv File to build forms
Project Home > Other Functionality
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Benefits: Shared Library
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REDCap Library:
Accepting requests for open domain assessments
REDLOC:- Builds Forms - Obtains Licensing
Requirements
Project Settings
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There are two data collection instrument types:
1. Data Entry Forms: Data entry by study team2. Survey: Data entry performed by subjects, participants
Data Collection
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(1) Data Entry by Project User
REDCap Account
Required
https://redcap.partners.org/redcap
Survey
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(2) Data Entry by participants subjects
SURVEY
No log in required.
REDCap generates unique URLs
https://redcap.partners.org/redcap/surveys/?s=GrQES4YYR8
Project Settings
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There are two data collection instrument types:
1. Data Entry Forms: Data entry by study team2. Survey: Data entry performed by subjects, participants
There are two data collection formats:
1. Classic: One record per patient (WIDE)2. Longitudinal: One record per patient per event, with
the possibility of defining multiple arms (LONG)
Wide vs Long Design
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Traditional VS Longitudinal
Wide vs Long Design
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•Each FORM will create fields in database- Data model by REDCap is EAV – Single Table
•Projects with multiple visits executed two ways
(1) Traditional Format: (WIDE)- Create unique forms for each Visit- Data saved as one row with distinct fields
Traditional Design
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Wide (multivariate) Example
§ Each record is a row in data export§ Each Lab Visit variable is unique:
alb_b, alb_v1, alb_v2, alb_v3…
Limitations: Ø To search for all Albumin > 10,
must parse through all alb_ variables
Ø List of forms may get unruly if you have a lot of forms / visits; Useful for trials with less time points
Wide vs Long Design
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(2) Longitudinal Format (LONG)
- Create 1 Form for each measure- Create Events for each visit- Designate FORM to multiple EVENTS- Data saved as multiple rows with same field
• As # of EVENTS increase this option easier to execute
Longitudinal Design
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Raw Data Representation
AnewrecordiscreatedforeacheventALLdatacollectedforasingleeventappearsinonerecord
Un-utilizedEventsdonotgeneraterecords
Greendotdenotesthatdatahasbeenenteredforevent
Wide vs Long Design
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Traditional VS Longitudinal
Repeating Instruments/Events
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Ability to repeat a data collection instrument or an entire event of instruments an unlimited number of times without having to specify the amount needed
Reports & Data Exports with Repeating Instruments/Events
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'redcap_repeat_instance' - the instance number, which is an auto-numbered value (starting with '1') that gets incremented each time the instrument/event is repeated.
'redcap_repeat_instrument‘ – includes form_name for repeating instrument• Included automatically in the report or data export• Displayed as a new row in the report or export file.
Data Management Applications
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Calendar - View and edit project calendar for scheduling and event tracking
Data Exports, Reports, and Stats - Extract data fields from database to Microsoft Excel, SPSS, SAS, R, STATA software (Ability to de-identified data sets), View Plots (graphical representations) and Descriptive Statistics for data entry forms; view, edit, copy, delete custom reports; query database in real time and display data in a table format.
Data Import Tool - Add and edit data by importing data into database from a Microsoft Excel file
Data Comparison Tool - Compare database records entered by designated data entry persons (double data entry)
Logging - View and export a list of all changes made to the database, including data exports, data changes, and the creation or deletion of users
File Repository - View, upload, and download project files; view and download previous data exports (data and syntax stored files)
Data Access Groups (DAGs) - Restrict access to database records by group, users in the same Data Access Group can access records created by that group.
Record Locking / Locking Mgmt – Lock records to disable changes
API – Allows external applications to connect to REDCap remotely; automate imports and exports
REDCap Mobile App – Collect data offline (no internet access) to sync back to project
User Rights
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Customize Each User:Application RightsData Entry Rights
Export
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REDCap Data Export
• Export to Excel, SPSS, SAS, STATA, R
• Numerous de-identification options
- Removal of fields that contain PHI
- Automatic removal of date fields; date shifting
• Exports include corresponding syntax files
• Maintain record of entire export history
Reports
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Graphical Views & Stats
Data Quality
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Add / Edit Records
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Surveys
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- Public URL vs Participant List vs Designate an Email Address
- Anonymous
- Multiple Surveys linked to specific Participant
- Automated Survey Invitations
Survey Settings
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- Survey Title- Survey Instructions- Logo- Size of survey text- Font of survey text- Survey (color) theme- Question Numbering- Question Display Format- Require Field options- Survey Expiration Date- Save & Return option- End of Survey Options:
• Auto-Continue to next survey
• Redirect to a URL• Survey completion text
Survey Settings
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Longitudinal Example
Advantages- Can designated certain instruments at certain events- Can track which surveys have been completed
Limitations- “Save&Return” option may not be as intuitive to manage because each survey has it’s own link; Participant only receives 1st survey link.
Public URL vs Participant List vs Designated Email
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Public Survey URL: • Single survey link for your project which all participants • Link can be copy and pasted into:
• The body of an email message in your own email client• Posted to web pages.
• Limitations: allows for the possibility of participants taking the survey multiple times.
• Advantages: Participants can forward or resend the link to other participants.
Participant List: • Send emails and track who responds to your survey• Identify an individual's survey answers by providing an Identifier for
each participant. • Limitations: Must know email addresses• Advantages: Tracks Responders / Non-Responders
Public URL vs Participant List vs Designated Email
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Designate an email field :• Example field designated: email ("E-mail address"): • Capture email addresses for sending survey invitations on a form/
survey• Any records with entered email address will have that email address
show in the Participant List• Limitations: Email address saved to record• Advantages: First instrument does not have to be a survey
Anonymous Surveys
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Truly Anonymous = Public Survey Link
“Honest Broker” = Coded Participant List• “Behind the scenes” link • Information is provided to investigators in such a manner that it would not
be reasonably possible for the investigator or others to identify the corresponding patients-subjects directly or indirectly.
• REDCap/REDCap Admins have access to the key to the code.
Public Survey Link or the Participant List• For either method, the survey questionnaire must not contain any
questions asking the participants for identifying data • What is your email? name? address?
Participant Contact List• Do not enter unique values into the "Participant Identifier” field
• Links the email address to the survey responses.
Automated Survey Invitations
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Getting Started
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Partners HealthCare Access: https://redcap.partners.org/redcap/Partners users can log in with their Partners usernames and passwordsExternal users: contact EDC Support [email protected]
Language for grant and IRB submission:http://rc.partners.org/boilerplates
Getting Started website: http://rc.partners.org/redcapgettingstarted
Training:There is no formal training required to use REDCap. Video tutorials and Help&FAQ page in REDCap contain a lot of useful information.
Test site: http://redcap-training.dipr.partners.org/redcap/This is open access to internal Partners users - do not enter real research or
clinical study data.
Contacts
Contact Information for Harvard Catalyst REDCap Support Staff
Lynn Simpson, MPHJeremy AlphonseMGH, BWH, Spaulding & [email protected]://rc.partners.org/edcredcap
BIDMC, Children’s & [email protected]://www.bidmc.org/Research/CoreFacilities/REDCapEDC.aspx
For support for other Harvard schools or affiliated academic health care centers,contact [email protected]
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