resumé 2016 0213.llave ads.soft engr generic phlad

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 A BRAHAM DARIUS S. LLAVE mail [email protected] |  [email protected] social ph.linkedin.com/in/abrahamdsl code github.com/abrahamdsl  phone +63 [ 949 880 2898 | 2 5805600x2930 ] base Los Baños, Laguna, Philippines web abrahamdsl.com Junior Specialist    Data Management | Consortium for Unfavorable Rice Envts. (CURE)  International Rice Research Institute at Los Baños, Laguna, PH  24 Nov 2015  present ( Two months plus )  Provides technical advice on data management, graphical/statistical analyses as well as support to researchers and partners in production and preparation of Knowledge Management (KM) products.  Performs data gathering, systems analysis and maintenance on CURE and its related projects’ databases, websites. Includes collating, compiling, validating, encoding, checking the quality, integrity and consistency of, and archiving data; designing and testing user experience.  Generates documents such as data sheets and printouts for reports on activities and outputs of CURE and related project. Junior Specialist    Bioinformatics + Associate    Bioinformatics Support | C 4  Rice Proj.  International Rice Research Institute at Los Baños, Laguna, PH  01 Jun 2013  23 Nov 2015 ( Two years, five months, 23 days ) 26 Sep 2012  31 May 2013 ( Eight months )  Wrote custom scripts/programs in Perl scripting language to process custom Bioinformatics pipelines. ( Ex. Mapping back Sorghum bicolor  2.1 genes to in-house assembled genome of a related variety, utilizing PostgreSQL database for precise sorting )   Provided technical help to higher level researchers in conducting Bioinformatics analyses in the C 4  Rice Project. Acknowledged as such in  Two forward genetic screens for vein density … G. Rizal et. al (2015) as published in The Plant Journal   Created and administered Linux-based servers and/or virtual machines.   Set up a Drupal-based web portal hosted using Amazon Web Services aimed to make available for easy access pertinent data regarding bioinformatics analyses, nucleic and protein sequences as well as Single Nucleotide Polymorphisms (SNPs) and Insertion-deletions (INDELs).  Applying For: Software Engineer/Developer  Programming/Scripting Languages Perl 5,  PHP 5, R (statistical tool), C, C++, Python, JavaScript (vanilla + jQuery), , Java, C#, Ruby University of the Philippines Los Baños  Bachelor of Science in Computer Science Graduated 28 Apr 2012 Non-degree student - Biology First S emester AY 2014-2015 more on (3) Experience | Three years + four months  Education Technical Skills >> more on (2) 

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 A BRAHAM DARIUS S. LLAVE

mail  [email protected][email protected] 

social  ph.linkedin.com/in/abrahamdsl

code  github.com/abrahamdsl 

phone  +63 [ 949 880 2898 | 2 5805600x2930 ] 

base  Los Baños, Laguna, Philippines 

web  abrahamdsl.com

Junior Specialist  –  Data Management | Consortium for Unfavorable Rice Envts. (CURE)

  International Rice Research Institute at Los Baños, Laguna, PH

  24 Nov 2015 – present ( Two months plus )

  Provides technical advice on data management, graphical/statistical analyses as well as

support to researchers and partners in production and preparation of Knowledge

Management (KM) products.

 

Performs data gathering, systems analysis and maintenance on CURE and its related projects’databases, websites. Includes collating, compiling, validating, encoding, checking the quality,

integrity and consistency of, and archiving data; designing and testing user experience.

  Generates documents such as data sheets and printouts for reports on activities and outputs

of CURE and related project.

Junior Specialist  –  Bioinformatics + Associate  –  Bioinformatics Support | C4 Rice Proj.

  International Rice Research Institute at Los Baños, Laguna, PH

  01 Jun 2013 – 23 Nov 2015 ( Two years, five months, 23 days )

26 Sep 2012 – 31 May 2013 ( Eight months )

  Wrote custom scripts/programs in Perl scripting language to process custom Bioinformatics

pipelines. ( Ex. Mapping back Sorghum bicolor  2.1 genes to in-house assembled genome of a

related variety, utilizing PostgreSQL database for precise sorting ) 

  Provided technical help to higher level researchers in conducting Bioinformatics analyses in

the C4 Rice Project. Acknowledged as such in Two forward genetic screens for vein density … G.

Rizal et. al (2015) as published in The Plant Journal 

  Created and administered Linux-based servers and/or virtual machines. 

  Set up a Drupal-based web portal hosted using Amazon Web Services aimed to make

available for easy access pertinent data regarding bioinformatics analyses, nucleic and protein

sequences as well as Single Nucleotide Polymorphisms (SNPs) and Insertion-deletions

(INDELs). 

Applying For: Software Engineer/Developer  

Programming/Scripting

Languages 

Perl 5, PHP 5, R (statistical tool), C, C++, Python,

JavaScript (vanilla + jQuery), , Java, C#, Ruby

University of the Philippines Los Baños 

Bachelor of Science in Computer Science

Graduated 28 Apr 2012

Non-degree student - Biology

First Semester AY 2014-2015 … more on (3) 

Experience | Three years + four months 

Education

Technical Skills >> more on (2) 

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Software Development Work

 At work on the International Rice Research Institute

C  4 Rice Genome Informatics

 

A set of web applications designed for information sharing, visualization finding matches

(BLAST  hits) of biological sequences such as genes, mRNA.

  Made with Tripal Genome Construction Toolkit   as based on Drupal  6 content management

system, involving the use of ‘Chado’   PostgreSQL database schema. Also includes

SequenceServer , an interface to NCBI BLAST   program as well as GMOD GBrowse 2  whichallows viewing of biological features like chromosomes and genes using only a web browser

on the client side.

  All open-source software (for non-profit use), running on Ubuntu Server 12.04-based platform

hosted by Amazon Web Services.

Special Problem in partial fulfillment of the requirements of BS Computer Science

The UPLB Express Ticketing System

  Nominated for Best Special Problem

  A web-application that aims to automate processes in gaining admission to events in the

university, namely: the availability of online booking of tickets, modifications such as

transferring to other showing times. Written in PHP 5, aided with CodeIgniter framework and

uses MySQL as database back-end. More info at: https://github.com/abrahamdsl/the-uplb-

express-ticketing-system and a live demo at  http://uplbtickets.abrahamdsl.com

Databases 

  PostgreSQL

  MySQL,

  Oracle 8

Operating Systems

  Ubuntu Linux ( Client & Server, 12.04 LTS, 14.04 LTS)

  CentOS Linux ( Server, v5.7 )

  Windows XP, Vista, 7, 8.1, 10

Cloud Amazon Web ( EC2–servers, S3-storage ), DigitalOcean

 Applications/others 

  Microsoft Office Suite 2003-2010

 

Basic Statistics

  Search Engine Optimization (SEO)

  Git version control system

  TortoiseSVN - Subversion source control system

  NetBeans

  Microsoft Web Expression 3

  Microsoft Expression Blend

  Notepad++

  Bioinformatics

Mark-up Languages xML 1.0, HTML 4.01, xHTML 4.01, HTML5,

CSS 2.1 & 3.0, JSON

Content Management

System/Frameworks

 

CodeIgniter Framework for PHP

  Drupal 6, 7, 8

Server admin +

command-line essentials

  Apache Web Server ( configuration + .htaccess )

  Linux shell tools & scripting ( vim, nano,  shell/terminal

commands; Firewall configuration e.g. fail2ban,

iptables )

LanguagesFilipino (Tagalog), English, a bit of Korean & Chinese

(Mandarin/Pǔtōnghuà/Guóyǔ) 

Cloud Amazon Web Services ( EC2, S3 ), DigitalOcean

Software development work

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Practicum in partial fulfillment of the requirements of BS Computer Science

Computerization of staff payroll of-Redbana-Hanbitsoft Philippines

  Formerly Redbana Philippines Corporation

  Participated in the attempt to make an automated payroll system for the company I spent my

required internship, Summer of 2012. The system is a web application that uses PHP 5 andMySQL. 

Education

  Non-degree student | First Semester, AY 2014-2015

University of the Philippines Los BañosTook up an Introductory subject to Biology (BIO1) to have a fully immersive experience

leading to more understanding and appreciation of job’s demands.

 

Secondary School | 2nd – 4th YearPresident Diosdado Macapagal Memorial National High School Bulaklakan, Gloria, Oriental Mindoro

First Honors

  Secondary School | 1st Year

Sacred Heart Academy  Maligaya, Gloria, Oriental Mindoro

  Elementary School | Grade 4 - 6

Gloria Central School 

Maligaya, Gloria, Oriental MindoroFirst Honors

  Elementary School | Grade 1 - 4

Novaliches Elementary School Gulod, Novaliches, Quezon City, Metro Manila

Award

  Commission on Higher Education, Republic of the Philippines

Full Merit Scholarship | Inclusive Years: 2008-2012

Related coursework

Basic Statistics Object-oriented Programming

Web Programming Design & Implementation of Languages

File Systems and Databases Machine Level Programming & Logic Circuits

Introduction to Software Engineering Numerical and Symbolic Computation

Principles of Accounting Design and Analysis of Algorithms

Artificial Intelligence Data Communications & Networking

General Economics Automata & Language Theory

Education (continued)

Related coursework | At UPLB

Award

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Training/Seminar

  30-31 May 2013

Introduction to Bioinformatics Training Workshop 

IT Learning Center, International Rice Research Institute | Los Baños, Laguna, Philippines

Officiated by the Te Tzu Chang-Genetic Resources Center   team, it is a basic training in bioinformatics.

Topics discussed included instruction and hands-on on how to use various web applications and

standalone tools for various kinds of analysis, ex: Galaxy  and NCBI databases. Aside, it was also tackled

what is the best algorithm or tools to use for depending on the circumstances, with respect to hardware

and software resources, size or magnitude of data to process, among others.

  31 Aug – 01 Sep 2013

#Bigas2HackInternational Rice Research Institute | Los Baños, Laguna, Philippines

BIGAS2HACK is a two-day developer event and hackathon  hosted by the International Rice Research

Institute (IRRI) and Smart Communications, Inc. (Smart) and powered by SMART Developer Network

(SMART DevNet), the developer community for Smart's technology platform. Joined a team from the

Philippine Rice Research Institute (PhilRICE) who is a contender for the category wherein the aim was to

design a web-based user interface for the Institute’s Oryza2000 program.

  12 Sep 2013

McAfee Executive Breakfast RoundtableCebu Parklane Hotel, Cebu City, Cebu, Philippines

An event that is primarily intended for decision makers of the enterprise on the topics of Cybersecurity,such as Chief Information Officers. This breakfast discussion sponsored by McAfee (a leading software

security solutions company), aims to update and inculcate the importance of paying great attention to

the security infrastructure of an enterprise by carefully describing in detail how infamous security attacks

from a decade back plus a few years were: how were they made, executed, spreaded, evolved and how

the software manufacturers as well as the enterprise responded. Better security practices and

investments in new technology, both hardware and software (of which the sponsor and its mother

company, are engaged in its sale/manufacture) are implied to be prudent, inevitable result and

revolution as a reaction to the ever-changing modus operandi of hackers and the like. Represented the

Institute in behalf of Mr. Marco van den Berg, Chief Information Officer.

  13-14 Sep 2013

Rootcon 7: The Philippines' Premier Hackers' Conference and InfoSec GatheringCebu Parklane Hotel, Cebu City, Cebu, Philippines

With the organizers proudly labeling it as the "annual premier hacker conference" in the country, this

event is a very good venue for people looking to take a peek in having a carreer in the lucrative and

adrenaline rush-inducing Information Security section of the Computer Science/Information Technology

industry. For seven years in a row, ROOTCON has been the go-to event for local and international talents

to present their research with peers in the security industry (Rootcon.org, 2013). People with different

backgrounds, from students, business process outsourcing agents up to white (and creepily) black-hat

proven computer hackers, come to acquaint themselves regarding Cybersecurity in this increasily

electronically-connected generation. Discussions were large in scope, from so technical ones like low-

level coding for testing the penetrability of hardened networks, disassembling complex software to

uncover malicious software, tackling the rise of mobile devices as an area of concern and opportunity, toin-depth legal opinion and Social Sciences-inclined analysis.

  15 Nov 2014

 2014 UX Philippines Design Conference

Training + Seminar + Conference

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Henry Sy Building, De La Salle University, Taft Avenue, Manila, Philippines

“  A day of inspiration, education and skills development for user experience (shorthand ‘UX’)

 practitioners … aims to inspire designers, developers, enthusiasts to learn more about improving

the human experience while adding business value. This conference is for anyone who wants to

learn what UX is and how it can make a difference in company’s products and services. ”  

A conference where it was imparted that human experience is essential if not core of business, greatly

shaping how our customers would accept or reject our services or products. Attendees were to attend

one of two workshops relating to the conference’s objectives. One was facilitated by Ms. Whitney Hess, a

User Experience and Life Coach, where she outlined how to build a career on UX.

  13 Jun 2015

Coderetreat PhilippinesGlobeLabs, Globe Corporate Center, Valero St., Makati City, PHL