rna.genomics.purdue.edurna.genomics.purdue.edu/.../=genomics_predictedgenes.docx · web viewzea...
TRANSCRIPT
acttcatcaacatcgacctccgactccgatgcgccgtcagtaacttctaagcgccaagagcgcaagaagtttagtaagatccccttacactatcctcatacatctagacatactccattactttccgttccattaggc
>gene1 Best maize hit:AY664414.1 Zea mays cultivar B73 locus 9008Best non-maize hits:HM596859.1 Zea diploperennis bio-material USDA:GRIN:PI 462368 bz locus, partial sequenceHM596856.1 Zea luxurians bio-material USDA:GRIN:PI 1441933 bz locus, partial sequenceAC243120.1 Gossypium raimondii clone GR__Ba0131I15-hog, complete sequence
AAACCACCAACTTTTGATGGCGAAGATTATGCTAGGTGGAGTGATTTAATGAAATTTCATCTAACCTCACTCCACAAAAGTATATGGAATGTTGTTGAGTTTGGAGCACAGGTACCATCTATAGGGGATGAAGACTATGATACGGACGAAGTGGCCCAAATCGAGCACTTCAACTCCCAAGCTACAACCATACTCCTCGCCTCTCTAAGCAAGGAGGAATACAACAAGGTGCAAGGGTTGAAGAATGCAAAGGAAATTTGGGACCTTCTCAAAACCGCGCACGAGGGTGATGAACTCACCAAGATCACCATGCGGGAAACGATCGAGGGGGAGCTCGGTCGCTTTCGTCTTCGTCAAGGAGAGGAGCCACAAGATATGTACAACCGGCTCAAAACCTTGGTGAACCAAGTGCGCAACATCGGGAGTAAGAAGTGGGACGACCACGAGGTGGTTAAGGTTATTCTAAGATCTCTTATTTTCCTTAACCCCACTCAAGTTCAATTAATTCGTGGTAATCCTAGATACCCACTAATGACTCCCGAGGAAGTAATCGGGAATTTTGTGAGCTTTGAATGTATGATTAAAGGATCAAAGAAGATCAACGAGCTTGACGAACCCTCCACGTCCGAAGCACAACCGGTGGCATTTAAGGCGACGGAGGAGAAGAAGGAGGAGTCTACACCAAGTAGACAACCAATCGACGCCTCCAAGCTCGACAATGAGGAAATGTCGCTCGTCATCAAGAGCTTCCGCCAAATCCTCAAACAAAGGAGAGGGAAAGACTACAAGTCCCACTCCAAGAAGGTTTGCTACAAATGTGGTAAGCCCGGTCATTTTATTGCAAAATGTCCTATATCTAGTGATAGTGACCGGGGTGACGACAAGAAGGGTAGAAGGAAGGAGAAGAAGAAATACTACAAGAAGAGGGGCGGCGATGCCCATGTTTGTCGGGAGTGGGACTCCGACGAGAGCTCCACCAACTCCTCCGACAACGAGGACGCCGCCAACATCGCCGTCACCAAGGGACTCCTCTTCCCCAACGTCGGCCACAAGTGCCTCATGGCAAAGGACGGCAAAAAGAAGAAGGTTAAATCTAAATCCTCCACTAGATATGAGTCCTCTAGTGATGATAATGCTAGTGATGAGGAAGATAATTTGCGTACCCTTTGTGCCAACCTTAACATGGAACAAAAGGAAAAATTAAATGAATTAATTAGTGCTATTCATGAAAAGGATGACCTTTTGGATTCTCAAGAGGACTTCCTAATTAAGGAGAACAAGAAACATGCTAAGGTTAAAAATGCTTATGCTCTAGAAATTGAGAAATGTGAAAAATTATCTAGTGAGCTAAGCACTTGCCATGAGACAATAGACAACCTTAGAAATGAAAATGCTAATTTGTTAGCTAAGGTTGATTCTCATGTTTGTAATGTTTCAATTACCAATTCTAGAAATAATGATGATGATTTACTTGCTAGAATTGAAGAATTGAACATTTCTCTTGCTAGCCTTAGGATTGAAAATGAAAAATTGCTTGCTAAGGCTAAAGATTTTGATGTTTGCAATGCTACTATTTCCGACCTTAGAACTAAGAATGACATGTTACAAGCTAAGGTTGTAGAATTAAAATCTTGCAAACTCTCTACATCTATTGTTGAGCATGTATCTATTTGTACTAGATGTAGAGATGTTGATATTAATGTTATTCATGATCACATATCTTTAATTAAACAACAAAATGATCATATAGCAAAATTAGATGCTAAAATTGCCGAGCATAACTTAGAAAATGAAAAATTTAAATTTGCTAGAAGTATGCTCTATAGTGGGAGACGCCCTGGCATCAAGGATGGCATTGGCTTCCAAAGGGGAGACGATGTCAAACTTAATGCCCCTCCTAAAAGATTGTCCAACTTTGTTAAGGGCAAAGCTCCCATGCCTCAGGATAATGAGGGTTACATTTTATACCCTGCCGA
CTATCCCGAGGACAAAATTAGGAGAATTCATTCTAGGAAGTCTCACTCTGGCCCTAATCATGCTTTTATGTATAAGGGTGAGACATCTAGCTCTAGGCAACCAACTCGTGCTAAGTTGCCTAAGAAGAAAACTCCTAGTGCATCAAATGAACATAGCATTTCATTTAAAACTTTTGATGCATCTTATGTGTTGACTAACAAATCCGGCAAAgtagttgccaaatatgttgggggcaaacacaaggggtcaaagacttgtgtttgggtacccaaagttcttgtatctaatgccaaaggacccaaaaccatttgggtacctaaagtcaagaactaaacttgttttgtagGTTTATGCATCCGGGGGCTCAAGTTGGATACTCGACAGCGGATGCACAAACCATATGACAGGGGAGAAAAGGATGTTCTCCTCCTACGAGAAAAATCAAGATCCCCAACGAGCGATCACATTCGGGGATGGAAACCAAggtttggtcaaaggattgggtaaaattgctatatcccctgaccattccatttccaatgtttttcttgtagattcattagattacaatttgctttctgtatctcaattatgcaaaatgggctacaactgtctctttactgatgtaGGTGTCACTGTCTTTAGAAGAAGTGATGATTCAATATCATTTAAGGGTGTGTTAGAGGGTCAGCTATACTTAGTAGATTTTGATAGAGCTGAACTCGACACATGCTTAATTGCTAAGACTAACATGGGTTGGCTCTGGCACCGCCGACTAGCCCATGTTGGGATGAAGAATCTTCATAAGCTTCTAAAGGGAGAACACATTTTAGGACTAACAAATGTTCATTTTGAGAAAGACAGGATTTGTAGCGCATGCCAAGCAGGAAAGCAAGTTGGTGCCCATCATCCACATAAGAAAATCATGACGACCGACAGGCCGCTTGAGCTACTCCACATGGATCTATTCGGCCCGATTGCTTACATAAGCATCGGCGGGAGtaagtattgtcttgtaatagtggatgattattctcgcttcacttgggtgttctttttgcaggAAAAATCTCAAACCCAAGAGACCTTAAAGGGATTCTTGAGACGGGCTCAAAATGA
gttcggcttaaggatcaagaaaattagaagcgacaacgggacggagttcaagaactctcaaatcgaaggcttccttaaggaggagggcatcaagcatgagttctcttctgtaatactcaaaattgtgtacaaggaatatatagtgttttcctcatttgatgtgtctcatttgcatcataaaaagagcatacctgaaatttagagtttaattcaaacaaatgacaaaaaatgcatcatgttggagtttatatgtttgtgcattaaataaaataataatgttaatggtaataagataatgattgctagaagttgaattaaaccctaaattaaaactagggttttcaaaaataagagaagaaaaaagggtataaaaatataaataatatactattatctccaagatttatattctcatttcacaatatgattggaggataaaaatctatacaatgttcgaatttaaaattcaaattcaaaccaaattttgaaatgaagaaagaaaatagaaaaaaataaaaaggaaaaagaataaaagcctcatgggccgccaaaccatcatttcggcccgctccagcttcccacccgcgcagcccacacctgaagctcgcgccgacgtgtgggtcccgcttgtcagccgcttttacttcgcgcgcgcgctgggtgactctctgtctggtgggcccggggcgccagactcttcgtccacctccgtaacaaacgcgtgagaatcgaccgcgcctgagcaccgtaatctccggaattcggttgcgattggacctagtctcgcggggaaagtgggggcataagaagacccggcgtcgcccatcctctgccctcgctaatcttctcaaaatcgcacgcgcacagaaaacccagagcctcgcccatgctcgagtccgccgtcgccggcttgtgcttgcaacgccacttgatgtccgggaggtagttagggagctgcgcgagcgcactaggaaggcatagcaatcctcaatttggtggtcgggacctcggagggtggttgatttcgcgtcgtcgctggaacaccgccgcggcgccgcatcgtgccgcggacccagctctgcacagctcaaacataggtaagaaaaccctaggccatttcgctttgatctcagtaccgtgtagcgcgtttcaatttgcgagttggggcacgggttcgccggattggatgaccacggcggagcgccgccgtggggatcgcggcgctgcgggggtcctaggtcccgaggtgggggaagagcgtcgggaccgtccgatctgggcgaacggctgcgattagaagttagcgtaccccttcgccactttggtcgggtaccgttgatctcgaatctaacggtggtggttagatctggtttcataaactctgggccgtcggatcccgatccggcggttggtaacgcataccggttcggggttgagtgatctaatctgagccctcagattctaatcgtgcggcccacatctacggataccccttcgcagggactttttgcttaagaaaccctggatttattagaaaccaacccgcggtccacaggaacagtccacagagtcttggaaacacttgcaccgaaacccctgagttttctgggattcgaggcctagttcaggggatattaaaaaccgagaaaatgattatagaatttagtttttaatacaaaaacaattctagaaacttgtaaaattcatagaaattccatttttgacccaaattgagccattccaatttctaaaattttgtaataatattctctaccatttagagtcactgttttgacatgaactctgatagaacattaatttaacatttaatcctaatttaatcacattaaaccttaggaaattcataacttgaaacctataactccaaatttagtgattccagttcctatgatctcattttaatgtatagatttttactgtatattttattcatctgtttggtgtgatgttgattttggctatactatgtatgtattgtgttgatgcgaatagacgagcaagccactgtggaaactgaggttcaacaagtagaagtagctgagcaggagctcattgaaggcaagttgtgcccttgatcacttacttttcccaaccatgttcttattaattttaatgatctgcataggtaaattttgatgggagactttatgttaccccagttttgattacctctatacctt
gttcacccctgaaataattttggggagggcgatcagagtgcttttgtggatgggtatggagttacactacacatgattacaatgatattatcttaatattacactggtcatgttaagatcattaaattaatgggaacatggagcgacaaccgggtaaaacagtggtacctcaagggtataatgggacggccttggctgggtaattaggaaagctagtggaagactaccttacccgaaaggggcaagggcagtaggggagaggtcagtgcggggaggtccctggttgattttgctgggatggctgtcagccaggaaccctgaactggatcttcctataaactgtagcgggttttcggaagctagtggaactttgtaaaggcctcgtagtggatccctagccattcacctcggtagtgtctaaggtccttgcaaacccaggcgacatgggatacacgacttgtgggtaaagatgcgcaacctctgcagagtgtaaaactagtatactagccgtgctcacggtcaagagcggctcggaccctcacatgattaattatggaacttaaatttaatttgacattgcatcgcatttgggattattttactattactgttctttattattattaaggtttggtatttacttacacttagtaattgctaataaaattttgaccaacttataaaagcaatgctcagcctcaacctctatttcattgatcagccttacactacatgaactcccacctttggtgagttcatgccacattattccccacgacttgttgagctatgaacgtatgtgagctcactcttgctgtctcacacccccccacaggagaagatcaggtggtcgaagaggagctgcctaacactgaggagttcgatctgatctaggtggcgtgtctcggtcgacattggcgccgacgatccttagttcattttatacttattgttttcttttgtaataagacttccgctatgtaataaatactctgatgtattatgacatttatctctatacactctgttattatatatgttgtcttcttggcgcatgtatgagatgcacccggctttgtcctttaaaaccgggtgttacatcttctccctacacccctcaacaaaatggtgtagtggagaggaagaatagaactcttttggacatggcgagaaccatgcttgatgatacagacttcggatcggtttgggcgagcggtcacacgctgctacgcatcacgctatatctacatcgatctcagaagacatctatgactctaccggtaaaagccatattcataatttagaagtctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgaaattcaaagctttgaattcgtataattaggtatatgtggagtacttcagtgaaccaatggactacaaaactgagccgagctaagaattgtggacattattatcacatgaaatactccttggtttactaattactaagagaatgttgtcaaggaataacaacaaataccacaattagtgctattgggtataatgatatatttgctcaaataaatgattcatgccccgtatcctttccagttcaaggaaagaaggaaactcaaatgcaatttagaccactgtaagatgaaccaataaagttattctgctacctagcaccatggtgtatctaatcaataaaaaacaaggatgatggttttatttataaagtggtcaactatattattttaaacaaattcagatcaggcaaggacttgactttgacacacaaaatgagtatttaccttactacatcatctgaggagcttaaattttttaccacgttagccaataggctttggcagaagttaaaatgtggggcagtatctaataaagcatccatgcaacggacaaccagagtatgatagtgggg
>gene2 (reverse strand)Best maize hit:NM_001158676.1Zea mays LOC100285786 (si618065b11), mRNA >gb|EU973949.1| Zea mays clone 424851 nuclear ribonuclease Z mRNA, complete cdsBest non-maize hits:XM_002453594.1Sorghum bicolor hypothetical protein, mRNAXM_002436496.1Sorghum bicolor hypothetical protein, mRNANM_001052815.1Oryza sativa Japonica Group Os02g0214300 (Os02g0214300) mRNA, complete cdsXM_003571604.1PREDICTED: Brachypodium distachyon nuclear ribonuclease Z-like (LOC100834210), mRNA
TTACTTCTCCAACGATATCAATTTCTGTAGGTAAGCctaaaaattcacaaaagaaatccagctccaaccattgtttgattttctttataagcatgtatgtcagcagggagaaaaccaattgaaaagtctacagtggtgcagagttgggacagagcgaggttggtttacccacCTTAAGCAGTGGGCGCAGCCACTCTTTGCACTTGTAAGAGCTGTGCAAGAACGCGATAGCTGGTTTTCTTCTAGGGACGGGGTCGTCAAGCTTCAGCAGAAGTACACGTACTCGTCCTTGTTCACCTAGctgctttgaaaggaaaaaagtagtgatagtttctggttagaaaaatagaggggaaaataaaaaccagcagtaaggcgttgactcggtagtttagtgtggggaatacatgtgagtctggatctgagaacctagaaaaaaggatgtcgactatcaagggtgcacccaagtattcagcagagggatgcaatggagtctgcatgtatgtggagtaagagtccactattatattcttgctctagatctc
gtgaggctgcttagatgcgattggctcctgtaggtcgtaggtgacacgatctggctgccggttacCTCAGTGATTAGGTTAAAATTTTCTTCAACCAGCTTCTCCACCCAGTTTTCCACCTCTTTACTGGGGCACGACTCCATTGGATTTGCctgagattaccacagacaatcaaccctgtaggttcaaccattttagcagcacattcatttaccaagagtccaagatactgaatgtgaaccaaagccctttcagtttacacgataatttgaagaacatagaaagagatgcagacctcgacatttaggatagatgacaccaaaaagaaagggtagcaatatccaacgttaacatcaacaaggtacaaaaagttttggcatacaattctacttaatttgtctaacaagtcattcaaattgcataacaatatcacatgaaaatgtgacgagacagaacaagaaaaaaacctggaagaaaacagtctctgcatgcccatagagattgcggcggacagtcttggttctaggaagatttgggtcagaagctacagacCTGTGTTCGCTCCCTAGCAGTGTGGTGCACCTCGTTTGGATAGACACAATAATTGTCAGAGACCTCctgaatcaaaccaggaatagtattgttaacttgtaagcaaaataaaggatgtttgagggatggcaaaataaatgatgtttgagacatgctcttgtgctttgcaactttgggttggaagacatctgatccatcatggaaaatcttatggtggtgaagttgtggtagctttattctctgtaattctgagcggcctgtaagcgactttattacacagatgttttgctctatataaattgttctgtcatgtgtatccttatctatgttttttttcaaaatttgtagtggtttgaatcaagcagctaccaacttctattcattcgaccaagggcgcattgctgcttatatagactatatgagatgattagtcgttcaacttccagcaccaatcaagaagggacaaccttaccccaggtgcaagggaatattgaatttcgaaatgtgtactttagttacctgtctcgtcctgaaatcccaatattaagtggtttcttcctcactgtaccgacgagaaaaactgtggcacttgttggtagaaatggctcaggaaaagcagtgtaattcctctgatggagagattctatgacccaacattaggtaagagcgttgagaagcatcttttgttttccacttctatttccactcaaaagactactattatttttcaggtgaagttcttttggatggggaaaacataaaaaaattgaaagtagaatggttaagaagccaaattcgtctggtgacacaagaaccagccttattgagtttgagcatttaggaaaatattgcttatggaagatctgctacctttgatcagatagaagaggcagcaaaaacagcccatgcccatgggttcatcagttcacttgaaaagggggacgaaacccaggtaaaggaggttaccatatatcttattgtttatcaaggctagactgcttaggcattgaatctctggtactcaccttttgaaattctgtaggttggtcgagctggtctaacactcactgatgaacataaaatcaaaatttctattgctcgtgctgtgctttcgaatccatccattattttgcttgatgaggtcaccggaggacttgattttgaagctgagaaggctgtacaagaagcattagatgttctgatgttgggaaggtcaaccattataattgctagacgtctttgcctcattaaaaatgctgattatatagctgtaatggaggagggccatcttgttgaaatggggacacatgatgaacttctaaacttggatggccatactcccttcaacaagttactaaaccatgcttcaatttttgaactccaaagccaccaagccagacagacCTCCACACCTGATAGCTTGAGCCGCTTGATCTCGCTCCCTGGTAGGCCAATGAACTCCTGCTTAAGCTTCTGCTTCACCGAGTATATCACATACCCctgcatacacacaatttaattgagactccatccaaccattgcaggattataacagatggattcacaacatacacagttccaagaagtgaagtgaaccaattcatctcacCTGGCTGGGTATGGCGTGATAGGTCCTGAAAGCCCTGACCTTGAGGTCCCTCCTGAGCTCGTACTCCTCCCTGACCTCCAGGGGGACCAGGTTGTGGTTGAGCTCAGACTGGTCCAT
ggcgcggcgatgcacctcaaatagccgctccacgaggtcccagaggcacgctgggacgaagatggtgggcggacgcagcctgaagagcccccgctagccacatacatgggaaggcccccgatgtggtcgaggtgcccgtgagagacgaagaggaactcctgcgagacggcgcactgcgggcatcggccgatgtcgaaggcgaggctcagcgtcgggaagatgacgcaggtttcttgaccgccgatggagacgaggaagcgggaataggagaggagctgcaggacgcaacctccatagtgtactcgtcgcagcttttcgccattccggcgccgaggagagaggaggggggcttaagggtcgcggtgggctgtgcgggcgattcccgcgcgcgtagggagggaatcgcggcggcgggggtcgtgcacgtgatccgcgggggagggaatcgcggcggcggggggtcgtgcgcgtgatccgcggggggagggcaatcgcggggggcgtgatccgcggcagggagggggagcgggggcagtctacagtgcacccttaatagttagtagagataacacacatatgtacataagttattgtgttattatacggttccgttgcaacgcatgggcactcacctagttatatatatgaggtcagtatattgggagcctaaagcttccaatagttacaggaagcccagccaccccctggtccacacccgacaaccaggcacatgcggtcgggtgcgtcccccgccatgcaccaggtcaaacctccccacgcgtgtaagtcaaaccccggtccaacacccaacctccgcgtgggacgcacaacataaattgtagttctgttttttgcgcaaatagagtaaatagttcacagaaataacgtaaatattttgtagagatagcataaaaactccgcccaactactggaccaacaccacatgtgcagacacatgcatgcagatcctatttttatgatagatccaataattatggcagatcatggaagtttctattgcatgcgtgtaaattttggatgacattttcgtttccactgcatacgcgcaaaaattggattgatccataaatataggatcgctccaacagccatacagctaggcatgttagaacccaatttatgatatatactaatattaattattctacacagtgtagatattttatgtattcaatata
ctacgtaaaaaattgttttctgttgcatgcgcacaaaatttaggatgacaggaatttgcgatgaaagaaaatggattgacatgcatgggaaaacaaaaaaatcttattcaaatgttttatttcctccataaatatatgatcgctccaacacccatgcaggtagactcgttagaaccagtttatgatatatattgatactaattatgttacacggtgtagatacttatgcaatacgtacactacataaatatatggcatgtggtttactggtggacacatcttcatattcgagcgtaaaaaccagcagttatgagcgtaaatactgttccaacatgaaagctattgaaaacctcttgatgttggcatagatatgtatacaaagtgacataaaaatatgtacgcgattgtatgtcatcactccaccgcgaacatgcattcaggcgcgtcccccaacagacgcatgcatgcaatcctatttttatggtagatctggaaaatatggcaaccactaggcacatgcatgaggttcctaatttcatgcagatccaaaaattatgacaggtcgtgagagtatccattgcatgcgcacaattttgaacgacattttcgttcctacagcatacacacaaaaactggatggctggtatcacacaaagcataaatcattatagaaaattgcataaatatatacaacgtacatcataatcataattaataaagaaggctcaaccaacagccgcatgcataaacaaaggattgcaggtcatcaccggaggacgtcaccgaggccaccagatcggaagagttcgtaaacgaaggatgcccaaaccgtcgtgtagaccgccaaccctcgcagctcgcgtctcgcgtcaccgatgtcgccgctggagccacccgtgcctagcgtggcaaccatcgctagagacggacgcgcctcatggggtgccaccgttgctcggtcgtcagggtcaccaccgctcgcccgcctcgggccccatcatcgattgccctacgtattagggagctgccggcaccacgcctccgatttgggaaccaccgccgccgcacctccaaatcgggtgtaacaccccaaaattttattttgggcacttttcaagataatacaaacatcttgaaacaaaatatctttaataggattttcctcactttgtaagccacgtctcctgaaataaatataactcatagtaaaggatcaaatgaacagatcttatataagttaaattattcttttaaataatatatttagagatattctccaaataggttaagttaaaacatctcttactgaaaattttacactatgaatctttattcataaaataattatttccttgtgaggagctacatatctaaaagccctttcttagataggataataaattaattaattaatcaaatgatatatgcatctcatgctaggtcttattttgtggtgcatctcgaatttgaactctgaatccaaattaaaattttgaatttgagttagtacataaaatagaaaatgaaagaaaggaaaatagaaaatgaaattagaaaagaggaaacccacatatgggccggttttctcacttctcggcccacctctcccgcacggcccgcttcccttgtccacgctgcgatgaaagaagtgggaggagaagtatcagacttgccctaggaaaaaagttgggggcactcagacaaagacaccgaccttgcttcatgacccacacaacgtgacattccaacaaccagcgatttgtcgaccaacccgtctgcgaggtctattcaaaaaggagaccgaagagaaagggggctaagagtgatcgacaagtgaacgaccatccggtgcttctaaaggagggcgaaggtgctcgactcttccccaagaagctacatgttgcatcaaaggtagccttcatcgccttatgtgaagggtatctaggcgctaagcccaacctcactttatggcaatacttcttttgtgtcgagctgttgaggaagaagaaggagcgaggaataatggaatcatggtcgatcaggtgcgccagtatccgccttcacagcggaaggtcacgtgagtatatcccaacccccttttccttatataacaagggttggcacatgtgatggttctacctgcgagacatcgatcgagagccctcgttggggttaccgcttcttagcatcgatcggaatgtcccgttcgaggctccctaaactagagccacgatgtcacgcctgaagagaaagttcgaatccagggacatctagcgtgggtgcatatcctctaagagaaaggcgtcacaagagcggacattatctataaaacctctggtgttacgagaactaaaactttagcatgacatcatatgcactgcattatattatgaatgacttacccaaaatgcattcactaggctaaaatttcaaaacaaaaacatgtgatgtgatgcttggttgagtatacggtctagcaaggggattcttaaccctatgtaggaatgaatctcttcaagggctagaagcatgtgaccttatgatttgagcacaaaggagtgatcttaccaagcttggtagccatgtttaagaaataatgaattggagaggttaaacacttaatgtagcttaggatactcaaaactctaatttggagccccaaaaccctaattagtgccctatagggtgatttcaaattctatgcactttttgccaaaagtgtatatatcaaagtggtagagtaacaaaaaccaagaaacttttatatttggaggtttccaagttttgtggtgaaacttggagtaatttgtaaaagttcataagcacctctagtcttgaactctgaaaatagtgttgatgagccaactttgggctcttgtatcacttaatctataagggattttttggaagtcattatggcgaagttgtagagctactatagtagtccaaattttattaagtgacttagcccaaaacctatatgaaatttggagaaaaatgcccttgaagtcgggctgtcagtcgaagggaagtctgaacctagactgacagtggcatgagcctaactttggagccattttatgcttgatccattgagcaaatgaccaagatccttatgacaaagttgaagctgatatataggagaacaactttgatgcagtggggttggtagttcactgcataaaaatcgaagaaaaaggtccctaaagtcgctttgtcaggcgccctgaattgggtgtggcatggaacaataattgaatcatatcccaggttcactgaacccgtcgtcggcgtcctcacgtcgtgatccgagcttggcttgaagattcgtgtgaaggaacaaatatccgtggtgaaaagatcatcgggcagggtttggattggctcacgggcggaatcattcgtcgtacccacttgcacggcgacgtggccgagcagccatcgtcgtggtggttgcagtctcccgctgttacgccatgccgaggtccattttaccacgtcatcgtggtcgtggcgagtagggaattattgccctgaaccgttacaccgtcttgagccaccatgaccaagttccatgaaagctcttgatgccgtcgctggcatactcattcaaaattcacgacatgtgatgctggttcctttaaattgaatgcttccctcgctccaccctcttgttacgaacccagcgcaccacccctcactcccgatcatcaaccatagcttgagaatttcgtatttccctggaatc
ggttggaacaccatcgtgaaacacctcgccgtggccagcccttttcaggttagttcatgtccctctagtccccattttagtacctctctgacctctagatgattacggtttcgaccaattgaactctaccgcgttatagccctgggaacgtcgtgttgtcgctcgggaatgctgtcgtggacacccctcacgtcgatcggctcttccgggtcttctccgtccaaattcacatgatcaccatagttctagtgagtcactgatcccttccgggtcgtttgattgaactctaccggcttgtgtagtccaaattcgccggagctcggattctgctattgtcatgggcacacatgaattagggttggattattcaaattaacttaagagaagtgctcaggtagcctctgggacg
>gene3Best maize hits:
NM_001148386.1Zea mays uncharacterized LOC100274000 (LOC100274000), mRNA >gb|BT042177.1| Zea mays full-length cDNA clone ZM_BFb0153F14 mRNA, complete cds
EU966203.1 Zea mays clone 292556 single myb histone 1 mRNA, complete cds
AY271659.1 Zea mays single myb histone 1 (Smh1) mRNA, complete cds
Best non-maize hits:XM_002455819.1 Sorghum bicolor hypothetical protein, mRNA
XM_003569238.1 PREDICTED: Brachypodium distachyon uncharacterized LOC100830626 (LOC100830626), mRNA
AK365152.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031H21
CT830863.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110E03, full insert sequence
JF951953.1 Aegilops tauschii clone TaMYB70 MYB-related protein mRNA, complete cdsAK334835.1 Triticum aestivum cDNA, clone: WT011_D14, cultivar: Chinese Spring
NM_001049977.1 Oryza sativa Japonica Group Os01g0589300 (Os01g0589300) mRNA, complete cds
AJ495788.1 Oryza sativa Japonica Group partial mRNA for MYB19 protein
ATGTCCGTGTACTTTCTCCTGCTAGGGAGGGTCACCGGCGACGAGAATGCACGGCTCTGGCCAggtgcttgaccggcacatggtcggggacccggagttgtaaagaccagagaaggggaaggcttatgtgaagttgtcagtgacacattggaacagtgccacagactctttattggttgtttaaaacatctaggatctttgcgcaaaatcgtcagcgctggcgcaggcacaagcgtgtttccctgttcgtggaccggtttgggctagattcagcccaatcctgttcattattttctcttttccttttcctggtaacttgtgaaatacataaaaaatagtagaaaaatgattaaaacatggaccaattttactagactccaagaaatatgtagtatttaataaaaatacttctaagatttttaattcaaattataaaatgtatagcgtaaggtacttgagcatagcttcttagaattttagaaatattttaataatcccaaaaatcctaaaactttttgggtagacttaaaatgtttgttttgaaccttgagtaaagtttgaacttatttgaacactgtttgactaggaaaccaataataagcccaaagaattaaaccctttaatacctagggagtctaggagtagttttgtaagtagaacatgaaaatcatcactttgctataatttggtagcccaagaagattagttgaactaatcctaaaatattatctagctaaaagtcttggtagttaataggcttcatgaaggaaaattgtattcaagacacaacttactatcttcttgttataaatttgcatatccatgacacaacatatcgtaggatgtgaataaggccaacatatcatcatatgaggggtttggtcccacatggatcacgatctatcatattattttgtcAGCCTCGGGAGGCAGGGCCGACCTGTGCCTCTCGCGCATGGAGAGGCTGAGTCCACGCAGAGCCTCCGAGACCGCGTCGGGGCTCTCGAGCGGAGGAGGccaggtaggcccaccctgaccgcatcgccctcccggttgatgatgaaatcgagcttcccgaagcggatgccactctagggtgtagtcaacgcggggaccgccactggccctcatggtcgcgccaaggttcctcggcggtggaggctctcgaaatgaatcacggcttcggggatgcgattggtgtcacgcctggccatccagagcttgaagagctttggcacggaaagcgcaagtcccctacctggcgtgccaactgtcggtctttcaaacctcgctccgaaaagtaaatttattgtgcgcattccatgctctggacggtttgcgaggtgtgcacaagatttatactagtttgggcagcacctccctacatatagtcatcggcggcttgcgctatcgacaccattgatgatcaaagctcgtagtatgggttacaagcaaggcgagagagggaggagaggctcccaagtctcttgttcggggtggaggtggttacaaggtggagtcctagctaggtcttggcttggcagcagggcttcgatctccaggtcctc
ctctaattcgtcggtcttctgggcgtcgtcttctctagggtccgtccttgcatcgtccacccgagagaaagaaccctcaagtgctctctctagaagggtgtcctccatgcgctcctctagaacagggtccccctttgcgcttgggggccgacctcctccctttataagctaaggagcggggggtcggcccgtggtggattcctttggaaggatccaccgggtgatggtaaaaccagggttcttaccatggggtaaagccacacatgcttgcaatcgcttggctatcctgtattctttatacgaacgtcgctggtggcatgggcctgagcgctatcatttgggctatgccgaccctcgaccttcgtagcctggggctcggcgcggctcatcgtgttgcgccctgccagcgggcctgcgcacttaggcctagtcccgataggtcattagtgcaccgtcgtccagggacgtgcgggccataaatgcaccacagtccgagggcttgtagatcatgagtgctctgcaccccgagggtttgtaggccatgagtggtaggtagggtccgaggggcttgtagttaatgtgaccgatcatttatgatgggttggtctaGGGCCAGGCGCAGGATCCACTCGAGTGGTTTCCCTTCGACGCGACCGCCCCCCTGTCCGGTTCCGCCAAACCCGACCTCGGGCTCGATGCCACaaggttcgtttgggggcggattcttccagagtagacgttatttgtctctttcgactgaccagtgggcccctgttgccagaggccctttcccagtgtgctcgctggccgatgggccccaggatctggggatcatatccccgacagagcgctgcgatgtttaaggtgtacagttgcggctatcgtaggggaggggtcacccgtggatagtctatggcggcacaaccacactcagcggccaacctagggatggcaacatggaattcctcgttggggaataacttccatacctgtcctggtgttgaatttttttccacggggatccccacgaatgcttgcggggtacatttcttcccctgcagggataaatcgccgacgaggatctcgtccctacttaaactacaattaggacgtacatcctttattattaatgcaaaacattgtcatttatgcgcattgttatatgtacatcaatatgaacacatttatacaataagtaatctaacaaaataattatttatttttattattatacggaatatcgtcatgtgcaaatttaacaaattcccgtttggaagaagatagacatcgcttcaccatttcccgtcccatttatgtgctatgtgagaaaatattttttcctgtaaaatggagaatcgggatagaatcccattgcctggttgccatctctagggcaaccctctttgattttatttatttttatgttgattttatttatttttatgtttgatgacgacgacgaagaatcaaagagggcttccttcgaacgccacccccgggcctgtggcaattaatcccctcgccttcgtaaccgccagtcctccgccacctctccacccaacaacaaaacaagcctaatgggtaatggcttcctcagttcctctccatctcacgccactgcgctgccctagaaccttcgccgccgcccctctttAGGATTACCGTGTCCTCGATCGCCCCCTGGCACGCCCGCCCCGATCGCCCCCTGGCACGCCCGCCCCGGATCCTGCACCGGAATTCCGTGTGGAATTCCGGACCCGATCGAAATCGAACCGCCTCCCTGCGTGCTCCCCTGATCAAGAAATTCTCACGCCGCGCGAACGCACGCCTGAGGCGGTTGGATCCTCTGGTGGGGTTCCTTGGTCTCGATTTGCTGTGGATGGGGGCGCCGAAGCAGCGCTGGACGCCGGAGGAAGAGGCCGCTCTCAAGGCCGGCGTCGCCAAGCACGGGCCCGGCAAGTGGCGCACCATCCTCCGGGACTCGGACTTCAGCGCGCTCCTGCGCCTCCGCTCCAATGTTGACCTCaaggtgacgctcggatcgccagggagggtgggcggtgggtttttggcgatcagctgaggggagtatggaggaaatctccagtccttttagtcggttagactgaatgaaagaaaatcgcggttttgcacgctccgtacatcctgacgtgttccttatttggttctagatcggtattttaggtggtcggtactcggtagtaggtattgcatagagttttgaggtggctcgagagtaatctggtatatcagaaacttctagccgtagcatcatgatgcccaaaaagcttccacacccctttgttttattccatgtagattttttcacctgctaggtattgatggttccttgagagagaggtcacttccatgtgttgatcttgttcaccataactatgatttgtttagttgggcataatatgtttttagtttccaagttcattttgaatgcctgtatcgatgagtacaaatgaatcttcggtatggtctatttgtgcAGGACAAGTGGCGCAACTTGAGTGTCACCGCAGGAGGTTATGGGTCTAGAGAGAAGGCAAGGATGGCGTTGAAGAAAGGTAGACGTGTGGTGCCTAAGCTTACTGCTGAGCCAATGGATGTAGATGTGAAGGATATGGACGATGCTCATGACACAGCCATTGATGTGGAACCGTTAGCAATGGCTTTCGAGTCCTTGCCAACTGAGGAAAGTCCAGATAAGTCAGTTGctaggtcagtagactcggtgcaaatattttatcaaaactacttattgtctttatgagtaacctaccttttcagttcgtcatcttcctttttggtgaaatgtgttttatgtgggactagatagaaatcatcgatataatttgatttgacattctgattctagtcctgccttgctagacattaaagttcagaagttgaccttaaggaaattccttttaaaccatatctgaagttctgaactgtctcggcaacaactagtgcaggaatttgtttcgacttattgtctttatgagcaacctaccttttcagttcgccatcttcccttttggtgaatgtggtttatgtgggactagaatgaaatcatcaatatagatcgatttggcattctagtcctgcctggctagacattaataagttgtttggtttgaggaatgagttagttcatcatcttctcactcctcacttttttgtttgttttgtggaatggattgagttgatccatcatcacctcattccttatagttatttagttagtactaatatgaggaatgaggtcatcccaccaaattttaggaatagacccataatgcaccaccatattttggatggagtgattcctcaaaccaaacaccccctaaagttcagaagttgaccttaacagaaattcctttgaaaacatattaaggtatgtgaactgtctcgacaactagtgtaggaatttgtttacagttgtgttttgagttggggttcgtga
tttttgtttacactaacagttgcagcttacaagcacattaaaggagcatataaacagtgatcttgtagaaaatcaaatgcttgcctattctctgccatattataggcattcatacatttcctttggtgctcagtttgacctctcttatcacgtctttagtcattaaagtttatgtcatttttaggaaatgaaatataaattattaccccctttcttttacgttagaaggcttgttttattcaatgatggttaaatataaaaggcacacatagttcccaatgctttcctatatatctaaaggctagttaacttcatgcacaaagcgttgaattgtttttttctcccaactcaatttgtttgtaccaaagcaacagagtagtaatagctacggtgagcatttatgcatgcaaccagtgtgaatgactctttgttgtgttcatgtatgtacacagtagtaatgtgtagttacttgggtcactttagtcagattagcaagtttttttttgtctttgttcccaaataaacgtgctcgctaaaactgaatggagggaccttgtctctgagttgatggtaactgtgcatcggaaatgaagttatatggtcatcgtaattgaaacaggaggctatgcacatgttaaactcttatggctagtgcgacaatggtgagctatgtgcagagtcattaaaagagaacatattaataaatgttgacctgactgatactcttactaTAGAAGCTGGACAAGCTCTATGTTTAAGCCAGTCACAAAAAATCTTATTGGAGCAGGgagggtcatcagtgtctaaaaacatgagttgaaggtggttgtatggaacgatggaacccaatcaatctgggttgataatttgatttggggtcgatgacatgcacaaatagttacaaaaggtcaatacaaataatacaaatccaacacgctaaccacctaataattgtgtggtgtgatagtcatgctcgatcatgcagccttcgtcctttcttgttcctcgctttctctctactcaggcaacctgatgccgctagtcacgaatcaaccactgctagccaacatctcacactaggcagtagtgaaattgattgcctgcaatgttctcttctcttttgtgctcctagtttcattggcgaagtcatgtccacaattgttggtagccatgatcaactctagttgtctctcatgtcacaaattcacaataacataaactcacatcatcttcgtgtcctctcctctccctgtacctcattatagccctttggatctgtggtgtactgtcgcaGTGGAGTGGTGATCCAGACAGAATCGAGTTGTTGACCTTTGATAGGTTTTGCCGTTTTGGAATCCTACCGCGACTatgtaagttttatgtatggaagatcgatggctagagcgtgtaccccgatgctgtggtcgcgcataaggagtaggcgagcgagaaagagacgtggtagatggcccttgaggccaagcaagataattgtcttgcttacttagattgatacatctctcattatatagagatgcttactttagccctaagtaagctattcttatttttatggaaacctcctagtcaagaatcaatcatgaccctattcaagaatcaatcatgatcctaatcaagaatcaattatgatcttatttatggaaacaaatgtgaaatatctaaaggaaattattttgtattttgtttctaattgtccttatggtgaccccaacatctataggtgacaccagttataagatatctcctcgcctctctgaacaactcgctcgagctagatatcggggtagaggtccttgaattgctgaagcagctcctaagtggtgtcagtcgccgccacaccattgaatgacatgccaagtgccctggcgtagttgggcgcaacacatggtctgctttaggcagtagtcgaccatcctgtatgggtggcacagGCGAAGGAGTCACCTGGGGTCCCACAGAACAACTTGAGCTAAGAAGCCATGTTCTTGGAATGGGAACACAGAATACAAAACATTATTTTTTAGAACcatggtatgaagggggtacaccttgttgtattgttttttcgacaagtgaaacgagaaccatgacagtctggaacaatatactagaacgaggaacatgttcccgagaattttgggttgacgcaactggcaacgaaactaaaataacaagttcaaatcttacaaataatgccatgccatatacatgacctttagatttcagtctaccaaatctcgaccatccatccaaaatttggaaccctagtcgcgggccatcttttatttgcacaacaacacaagctgccagcgtctgtctacatcactccattggtctgtgtccatacgcctttgtactctagcagccgccgagcgcccgagttgtggcagctgcaagctgccattcgcaccaagccaccaactaaccagctcccgagtcaccagtccccacctgcggcagctattgcccattgatacgaggtggtgacaccgacgtccggttagggatacacgacgatgtccaatgccggtggctttgcgtccattgttcgctctgtcactgactaccaaccgtgctactatggacacaagcatgctagtcggagcgtggagcgtgtgcccagcatgggatggcgtcccacgtcctaagagtcataggtgtgatgccctaatctaatcccaagtaactaactcaatcttctaatataatatttatccactaatcctaaccctgagcctatctctatgggcctccatgccctaggttgccgccccatgacatttagagcctacaaaaatgttttaagtgcctcaaataaatagttttttatttttggaaaaaagaaaaatactcggaaaaatacgaaaaattatcggagacttctacggggtatgttaacatgtttcaaacaccttttgtacttaaaaacattatacagcggtatgaatgcaacacactaccacaccaagttcacacttatgatctgttttagttgataaaaaatataaaaccataatgcgtgattctagaccactcaaatcttatcaagttaaaccaaattttcaaaaaaaaatgttgattaaaaaattagggtgttacaacagatctggttaagtacatggaacgagggcccaaagagggtgtgcagctctgtgaagtcctcggtggtgtcggtgttgcagcatgagggctttcatcaccgagttgaggcgaccggggcggtactctactgcgaaatcgaagccagacaacttgctgatcaactagtgttggggaatagttgagtcgctggtccaagaggaacttgagggcttgaggctgtagtggtcggtgcaggcgaggaagcagcgactctagaggtatggccgccaatgctgcacagcctgaaccagaccaatgagttcacactcatatgcagctagcttgtgatgaagagcggtgaagggtcagctgaagatggctaggggaccagcccttggtggagaacggtgccgaaacttgcttgcgaagcgtcatagtctacgacaaattgtcagtcaaagtttgacgtttcattcctaattgtctgcatggtgaccctaatgtcttagatgacaccagtcataacaatcttgcttgacccaacccttgatttgggatgatgtcctgg
ggatgcagaacgtgcccgaccctaacccctgtgattatgtgtaacaaggattaagcaacaaacatatatatcttgctatttgtagtatgcaacacatgtcagttgattacgttcagtaaagccaacttcgggacattattggatgtatccacatgtattattcatcttctgatactgcataacagttttaacatttttgcctcctttatggtctgtgctctattgagatgttcgggtagtgtctttatttgttcctatggtgtctgcagtacatctcgactctgtaccacagttttcaagtaaacaaaaaaggaaactgtttgttgtgaattggaatataatgttgacacatacatcctctgagttccaatgtgtgccctttctaatgttcaatttcttacagaggttgccttattatttagtttatttaactatgttagcatatctcttcagcggttgccttattatttagtttatttaactatgttagcatatcctcttgatgcttggtcatccatgtgactttatgtatgtctgatttttccaGGCTCGATGATCTCATATTAGAAGCTATAAGGAAGCTTAAGGAGCCTTCTGGGCCCAGTAAGGCAGCCATTGCTGCATACATTGaggtttgtggatatcaatttatggtctgctcacttgttgtattttgtttaacttaagtcagctgccctgctatttcttttctggtcactgctgcctgtaatgggaatatttgtctcatccttttgtatgaagaatctctgctgattttttgctaacttgagacaatgctatagtgatttttcttttgccgatggatttaacttaaattgtctatatatttAGGACCAATACTGGCCACCTGCTGATTTTCAGCGCCTGCTATCTACAAAACTGAAGGCATTGGTTAATTCCGGAAAATTAATCAaggtctctccctccctccttccctgggttgtctttttaggaataatagtggggacagacttcaagctgcatactatttgaatcatgattgtAGGTAAACCAAAAGTACAGAATTGCACCAAGTCCACCCCCCTCGGGCAGAATAGGCACTAAGGTATCCTCTGCTGAAGGGATGAAGGCAGAAAATAATAATGCTAAACGTCTAACTAAGCATCAAGTGATTGCTGAGCTGGAGAAGATGAAAGGCATGACCAAGGAAGAGGCAGCTGCCTTTGCTGCCAAGGCAGTTGCTGAGGCAGAAGTAGCAATAGCAGAAGCTGAGGAAGCAGCAAGAGTTGCAGAGGCTGCAGAAAATGATGCTGAAGCTGCAAAGGCTTTTCTTGATGCTGTCACTTTATCAATGAGAAACAGGAATGCTGCTTCCAtggtatagtgaacccagcctttgttagtatataactggtacataaactctttgactgataacaccttttgatgaatgcagATGCTTCGAGCTTGCTGA
tcctttacccatgcggtcatatggttttggccagcagcacaccggtgtttctgctgcaaagattttctggatatatgagtttcttgtatagccttatttatagatcacgacgcatcaactggaggggttttcaacatcttgctgttggtcctttgtcgttgcagcctttagacaatcgacaatatgataacaagaattatcgtgaaagtagtcttcatttatttttgttttcttcccattgtgttgctttgtaattaaactctagccttttcgtttagttagttgaaatggtgtcgtctagtagaactgtagtgaaaagaaaatgaagaaaatgttagatagccaccttagttattcaatttgctgtgatagtatgtttctagatatgattagctaatgacagcgtttaagattacattcctgctgtttcgtttttttctatagagattacctcttttaagaaaagcatgtaagatttacaaattcggctcgggacaccaacaaaagtacaaaaaagttcagcacaaatgatgtctcgtttctcatagctatggacatgtttgggatagcttttttctaaaggggttctatgaaaatttaaatttctaaataatctagctgtcacaagaatatgagaaaggggcttacatgtggaggaagataaacatagcgatagtttttctcacatagtgacaacttggagtttgcattcaaattgaattgtcaattttcatagaaaagtgctaagaagtgaagtgtttggttgtctgaaaccgatttcgatggccagaattcatccagaagtcgaaacaaaggggcttgtgtattcttatgtaacttttgtttggtttttggctaattttgctataacttctgtgaagttaatcgatcaaattgaacaactaatcttagacagaaaaagttaaataaattatgaactaaataggtctttaggctgactccaacagaaggcgtcatatcctatgcaataatagatttagcaaaactaaaatatgtataaatatttagaagtatagtaaatatgtatagttttatcatgcacatgtttagttctctgccattgtgaaggtgaggctgccaggcctactgccatatatgttttgattgtaaataaagttaggcacaatatatcttttttagagcagcacaacttgccacatgtgtggtggcctattttttttggcatcactaaggctatccctagcagtactcggatgcgaatgtgcaaaatatgcgtgcaatggtgaatatgagcgtgaaaaagtcgcttctagtagagcgcgtaggggatacaatccgacaagagagatgcaatatatgccctcctcaaggggtcaagcactcgatcagaactaaaccatcccgcgacactcacaacatgagcacacagggcaagataaagatgaggataaaccctaaagagatcgtcaacttcaccttggcatgcttccattagtgcctcaaaacatttgctattcttatctcttgaagggtcctattgttgtagtgtttctagtgaaagaagtcccacgctagcagcctgccagaaccattaatacatggtttgatccactgaacacttgttttatctatgaagagctgagttggcaccacgaggtgtcgactcagctatttgccgagaaataagcagatcctgccttctacccattatgtcgatgattaggtagagctcttacgtgggctaggttactaggatacgaccgttccgcaatagaacatggcactaatgtatcccctaaggtcccaacacctttttgatcattaccgaaatcataacatttctatatgataatttgagattgctataccagacctgactaccaagattgaagtctccatgctcgtcatttctagtgcttgcacaacctcctggtgccttatttactgacaattcccgggtgtaagccaacacttgcaaatgtcttttatttcattaaaaactac
gctttgtcgacatcgtcttttccaaacattcgggaccttagttgcaagtatgagaaatgttggttttggttaataaaaatgaaacattcatgaacaaataagccattacttaattcaagctccaccctgaaagtgtcaatataaaagcgaacaactagaagctcccacatcagaagctagaattgacgccacagcataaggcatcgcctccatgctatctgcacatggccccgaagtggaatggctaatttgcacaatctaggaagctcagccttctccctctcagttcctccgcaatcgacttaccagaatcgttgcggcaactccaattcaacccccactctttcccggtgtctatacttagtgaaagtcgtctagaggggggtggataggcggaaactgaaatttataaacttaaagcacaactacaagccgttgttagcgttagaaataaaaccgagtccgaaagagagggcaaaaacaaatcaactaagaaataaagcgagtgacacggtgttttatcgaggtttcgggttcttgcaaacctagtccccgttgaggtggtcacaaagaccgggcctctttcaaccctttccctctctcaaacggtccgtcggaccgagtgagctttcacttctcaaaacaaccgggagcaaaacctccccgcaaggaccaccacataattggtgtatcttgccttggttacaagtgagtattgatcacaagaaagaatgacatagataaagccatccgagcccaagagctcaaatgaactcgagtatcactctcactctcactagggttatgtgaggaaatggagaggatatgatatcttaggttgtcaaaaattggatgttatagttcttgtagtaattgggaatggatctatttgaatgctatgactggagggatggttggggtatttttatccccaaccaccaaatgcgtcgttggcagctattgttcgatggacaccgggtgtcagccgacaaccggcgcccccagcgcgacactannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactaaaaataataaaaaaatcagaaaaataaaaaatttataaaaaaaaaaaaataagaaaataggaagttaaagaagttaatggatacctatggaatacaaaccctacctttggtttggtttaagtagtggatgtggggcacttccttccgccgcgccatcgcttgaacaacagttcaattcggcgatgacgcggatctcgctcttcagcacgataaagacacggaaaagatttttgaaatgtcctccctccaaaccgcgcgcaacccgtgccgccgaatgcagtgtgttcatgtagaatgcaattcttccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccaccaattcaaccgttggggaggatgtatgtcgacgagcgcaccagacagtccggtgtgccagccacgtcacccaaccg
>gene4 (reverse)Best maize hits:AY664415.1 Zea mays cultivar B73 locus 9009, complete sequenceAY664419.1 Zea mays cultivar Mo17 locus 9009, complete sequenceBest non maize hits:AC243120.1 Gossypium raimondii clone GR__Ba0131I15-hog, complete sequenceDQ645537.1 Zea luxurians mitochondrion, complete genomeDQ645538.1 Zea perennis mitochondrion, complete genome
TTAGGGTTCTGACGGTTTTGACCGTTGGAGCTCTGACATCTTGGGGCACCGGACAGTTCGGTGCCGCACCGGACATGCACTGTTCACTGTCCAGTGCGCCTTCTGGCGCTGCTCTGATTCTGCGCGAACTGTCCGCGCACTGTAGCGCTTTTGCAGGTGTCCGTTGGAGTGGACCATTGCGCTGGAGCCGTTGCTCCACTGGCACACCGGACAGTCCGGTGAATTATAGCGGAGCGGCTCTCTAGAAACCAGAAGGTGGCAAGTTTGAAGGAGTGCGGCCTTGGGCACCGGACACTGTCCGGTGGTGCACCGGACAGCCCGGTGCGCCAGACCAGGGTTCTCTTCGGTTTCTTTTGCTCCTTTCTTTTGAACCCTAACTTGGATCTTTTTATTGGTTTGTGTTGAACCTTTGGCacctgagaattcatagtctagagcaaactagtcaatccaattatttgtgttgggcatttcaaccaccaaaatcatttaggaaaaggtttgaccctatttccctttcacttagctctttaaaaagtcttccagtacctccctcgtggcagcccgttagaagcatgcctcataagaatctttgtggcgacaatcgaagtatcctcactcaattttgaaacaaaccaccttccagtttcgtactgctactacctcctaggtcgtcgttctttccattgcttcgggttctttcctatgcttcggagctaccaaactcatagatttgcgatacagggacagttgaccgcacgctgcacaagaaagcctaaagtgcggcgatgtcataatgtgctcacatcagaagctagaattgatgccacgacataaggcatcgcctccatgctatctgcacatggccccgaagtggaatggctaatttgcacaatctgggaagctcggccttctccctctcagttcctccgtaatcgacttaccaaaaatcgtcgtggcaactccaattc
aacccccactctttcccggtgtccatacttagctctttgaaaagtcttccagtacctcccgcgtggcagcccgtcagaagcatgcctcataagaatctgtgtggtgacgatcgaaggctcctcactcaactttgaaacaaaccaccttctggtttcgtactgctactaccTCCTAGGTCGTCGTTCTTTCCATTGTTTCGGGTTCCTTCCTCTGCTTCGGAGCTGCCAAAGTCCTTCGTATTTACATACACATATTTGCTCTCTGGACCCATCTCCTGGTTCATATTTTCGATTATCCTCTTCAATTTCTTGTTGAAAGCTTCAGTGACGCCATTTTTATATGAAAGACCTTTTTTTATTTGTCTATTCCACTCCAT
ttaaatctaataaaggagccaatacaatgaaattccactagtatagaaaaagaggaatagatgcggatgcacatatacatcaatgggagagagaaaaacacatagatttgcgatatagggacagtcgaccgcacactgcccaagaaagcctaaagtgtggcgacgtcataatgcgcttggtaagtttcggccgggacaaaatatatcctaaatttgattcgtttaagacgtgtatggctaaacttttataagtttgatcgttagtatattaataactaagataaggttatattaaaaatcatgtttatatttgtttcaaatgaaatttacaataacacaaccttattgggttctatggcgtgcatatttttacggtgatataaatatttaaaaagtattactcgtttgaagtgtcttttctataatagtattaataggttagacttctctataatagtacttagaagtgagtgacttctctaaaaccgtatttcactcttatttttgcctatttctattttcttttcataatttctatcgcttaaaaagatattttacctagatttcaactccttttaaccgaaccctttcaaccccatcactacattcagcttaggttaggatggacattaaaagtgtttatattaaatttgttttacagattccaattaaaaacacaaaaacatttttgttaaaattttaaaattgaaatagctaaaatttgtaaaaaaaaaacaggacaactattagagacctgtacacaaaaatatgggtttctctacgagcaatagaatccatatccgatagaatataaaagttacgggttgaggaactgcaaccataactcattgagctgttgcaggggtaaccatcctccgtttatatgtataggacctgttgtgcaatttttatttttatttttaaatttttaacaaaatgttacatgttttcaattagaatttgtaaaataaacataacataaacacttttaacatccatcctaacttgagctgaatgaagagttggaatctaatcactacaggaaaatggttaaaaaacgtgggtgaaaaatcgtcgaacttaatgtaataggccgtcgaacttaccataagaacgtgggtttaccgacgaatatagccgacggtgatttttggatgaacttagagaagtaagttcgacagccccgacgaacttaacattaagaacgtgggtaccgtcgaacttaatattaagaacgtggataccgtcgaactagtatgagcaataaaggtaaaaagatatccttttaaacgatagaaaataagaaaagaagatagaaatagttgaaataaggatgaaattctgttttagagaagctcacttgtaagtattattttagataaacctaatctattaatactattatagagaagccaatccaaactagaactataatagcaaataactctataaaaacacacacatataaaataattgtattattattattatttgcccatcttcttctaactaagtctataaatacgaaaactgtctctgttgaactttctatacaaccatcgtattattttatatcaggggcatactaggcccgtacagattctacgactgcataggccccccaaaatcataaggccccaaaatctacagcaatatatatgcaacaaataaaaaatgttttgcataaaatattggtcaacgtgactaagaatcacaagaacgttgaaatcaatctattcctctcatttttgatcaagttatttcttcccttataagaagatttaatttaaacagtatcacgattataaaaaatatttccttatttatctctaatgcattgcaatcattagataaaaagatcttaaaatattgttgtcacaatcttaaggttgcacgtaaaagagacgaacaatctgatttgatgcaagtgacatatttgatgagttgtttcctctaagattttattccacaagaaagtatgtgccctattgacattctaaatttttttgaagcaacataattatttttctaatgcaactgatgcaccgaacaaagtttttctaaactaaagttattattgaagtcccatttttattctataactaggtgagtgcccgtgcgttgcaacgaaaacatataataacacaaaaattatgtataaatgtgtgttatattgatacgagaaaagatagtgaagataagctagcagaaatttgcatccaatgttattgagaagtgtcttacttttggttctcatgagcaacgataaattctgatcaatgaaatgcttggtagttggcacaactgatgagaacgaacaattacatgtttgttttcaacaatgattctcagctcacctttttcttttaaaatcagtagttggcacaaccactctatagcacaactcaaagcacagaagcagacgcctaagaaacacaacacccgccggtaccagcgcagtgtgttgccgaccggtgacacaatgacacaagacattatggtgtcggctaccacctccttggacatcttcaggaacgggtccatgttgtggtggtaccagccattttgcctcactcctatggatgttactctccagggcaggtgagttcatctttaac
>gene5 (reverse)Best maize hits:AY103582.1 Zea mays PCO147975 mRNA sequenceBT053879.1 Zea mays full-length cDNA clone ZM_BFc0001N20 mRNA, complete cdsBT043117.1 Zea mays full-length cDNA clone ZM_BFc0100C04 mRNA, complete cdsEU960258.1 Zea mays clone 222946 SNF4 mRNA, complete cds
Best non-maize hits:
XM_003579593.1 PREDICTED: Brachypodium distachyon sucrose nonfermenting 4-like protein-like (LOC100844830), mRNA
AK367711.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2060P11
NM_001059222.2 Oryza sativa Japonica Group Os04g0401300 (Os04g0401300) mRNA, partial cdsAJ575236.1 Oryza sativa Japonica Group partial mRNA for NF protein
TCACAGCTTGCTGCTCATCGTCGGACCAGTAGCCATCACGTCGCGCATGGCTAGGCCCTCATACTCCTCATCTGACTTGGTCGAGTGTTCGTCCATAGAGCCGACATCGATCTGCAAGTACCCTGTGACGCGGAAGAACATTAGCTTTGCAGTGTTAAGAGGtgctgagaagataaggaaaacaaaaaaccaaattgttgaacactgacataaatcgcccatacctcgtgcatgtgcagcatgtctcttttttcatcggaggtcttcatcagtttcagcatcacgaagatcgtcaacttaaaatatatatatagatatatgaaggcaccagagtccacctgccatgagaaccagacttgaagaggctaaatttaaagatgcacgagttaaaggcaagaagagtactgatatcattggtgaagtggttacactacctatgcttgccaaccaactttcctatcaagctagtgtgttgccttctgcagtatcacatacagttttcagcataagagttggttcaaatgacttgtttaaaacgtgcactgcaggccttttttgggcaaaatgtttccctcaaaataaatgcacaaatataaaagcagtgacaatccgggaggaaacacagcttattcactagccctgctttggcgacagagatctggtggggtaagtttgttgcccttgcttcaaacaggaagcatgccgagttgagcttctttcttggccctgagatcaatgttgcctgtctgtacaaactacagagtggttaaaaacatagttcctcactgaataaaccaaaattgttgatggaatggaagtccaaatgatcaaacatacaatagaaataggtaattctgaaagttggggaggagaaacccaaacaatttctccttatttcaagacataagatgatttgtaattttttaacacaaacgacattaagcttaatgttgtattggagaccatatctagaatttcatacaagtaatatatttatattatgaaagtgctgatcttgcaactgcttacacattgaatcaaatgaaagaatcagcaaatatatggagaagtacatggattaatggcgttctctgcatgacagcacCATCAGGCCCACCATAGAACTGTAGCTTTGCTTCTTTCCAAGCAGAAATGGGCTCTTCGTTGCCAATAACTTGAATGTTTCTCTGCAactgcatagcaaatgataattagtaagaacataaaatgcttccaagaagaaacaaagtaatttattccacccacCTTTCTCAAGATTAAAACAAAATCTGATGCAGTGAGCATGCCTGTTATGGTTCCCTGACGGTCATCCCAAAAAGGAACCAGAGCAAGACCctatgagacacaaaaggttcgaagctattcttaaattattaaactgatgccacgtatgaagtgcagatgaaagaagtgcctgcttctaggagcgattttgttgtgtttttaaaccgcaaaacataataggaaaacaaattaaactgctacttaaaaaggcaaacaattgctagcacaactttaaaaattcttcaaaatgaaagtaaaaacagagcaaagttgaaatgagagcaaacaagcaccatagagggaaagtgaactatttgaagcaactctagcaagcacagtaacatacataccACATCATGCATTATTTTAAATGCTTGTTTAACAGGAAGCTGAGTGTCCAAAACTGTTAACtgaaatgttcatatgaaatccgattatacacatagtctaaagagaagtgctggcttgcaagaaataaacctaacCTTGCTAGAAAGGGGAACAACGTCATATATGGTATTGTGTAATAATATTCCAGAGACCACATGGCGGATAACTGCTATTTGCATGCTTGGGTTCTGAGATGATGGCTCCAGGGGCAT
ctttgtttatttaaggccacagtaaataacagaccattagttatcaggaatatggagaacaagaaaatataatgttaaacttctaagacatactgttttcaaaatggtacccttatccatattagttcctctgatagaaggctctggctgcacaacgggtagtacattgttttccacaagcacttcattgctgatcagtccatattcatcacgtacaaagggttttgtctcatcacacctccagacaccatcaaccaaaaaccggtactaaattgcacaaaaatgccatataaatgtatgtggcatagaaaatgtcacaggagaaacataatatcttatgcaaatagctgggcagtggccatttgtacagcaaatatgcactactatagtatcatgttcaaatagcttgctaaccattgaactgaatcaaaccatcacatgtgaacatcatgatttacagaactcgcaataacaagggtgtgaatttggtacctgtgcgcaatgttatgtccaagaattacattgatagatgaaaaagcgacacatcaaatacaaaaatccatcatgaatatgtcaaatatatcatgtttcgatcaattgctggaattgaaaaacatattgaagttcaaaatagttgtctggtatatgcaaaagtagttccatgtaaagccaacagttaaggggcattcaagattcatttagtctaactgcaagtactaattgctggggaagaagag
gtgcaataaaaactccatgtacagaaacctgagagacagaagtgtggttgtatttaatcatcactcactttacaatggcgttaaatggctgctttctgatgcaacaactgcaatggcattctaccttacaggcattatgtaacggccaaaacatcttatcgaaaacgaaagagacagtgggatgtctttacaggcataaagattcatgatgcctttatgggggtgatctcgcaaatcaaattgcgaagaatcccgagctcggttacttattttaggaataaaagcattaacaaacacaattaatttaggaataaaaggattaactaaaaatgcagtcatttgctcctggtattttctctgttcagtagatggacaggggctcaccattccactccttgaggcacttgcgcagcgatgtcttcctaaaatgagcgcttgaagtactcgtgataatcatcctacataccagctccacatgaagtagcatctccagtacgatgaacaagatatagaaattttaggcaataactacatcaagaaactgaaggcaaaaaacacaggactatgaccgcgaactgaaagcgagcagctcaaaaaacacggtattccaccagtgacccagtcatcacacgctgaaagttccacaggtgtggtttcacatgtctacatcccagctattgacttcaatgagtggtatcaaatttggtttaaaggagagactagaccagtggaaagccagactggaggagttctcttctcaatgaaacatctggcgctctggtaggttgtcgagttccacaaacgtgcgggaatcactacaatgtcctagtgccatatcagggagaagttgactgcttcttgcggaaattacagaagcacatgcactgcagaaccattccatcgaactgacactatgacacccgctgactaccaatccaatttgatgtcacttgcaggcttgcagcgcaccgcgtaccatgataacaatccagataaggggctcaccgtgctgatggggtgacgagttgaggcgctgcctgcgttctggcccttccaggaggttgatgttgacaacaacattttcttaaacaccttcggcccgcccgcccttccgcaggaacaacacaacaaacaggccacatactgtaaataacgcccccacagagaagcagtagataatgcagagcaaaataaaaaacatgagctctgtttgtgttcctcttcaagcgagaggccctaacgtcaagcatcggaggccctaacgtcaagcgtgacagcgacgacgtcctccagcatcctcgcgatcctcgtcgagtgggaggaggagaatggatttgttgtgggagagggagcgaggcggctgcggataggggatgactacaccgcgcgacgtggatgggcgggtgggtgacgctgccaggcagggcaggcgtaaaggtttagggagaacacaaaagcgaatgaatcaagaacgcgggagagcacaaagcgaatgaagtaacctcaggaatccatatcctggattgtcgcgccttcgcccactgccgaccaccagcagttccctcccctcctctacctccctccccctgctggatctagccttgggctccacccacgaatccaaaccctagccccgcagttgtctcggtggaaccaggccatcgcgggggagggagcggtggatccggtgtgcgggcatgtgggagcgatggatccggtgtgcgagcggtggattcggtggaaccagaactcgatggtgctcgttccacctccactgtgcccgttgtgcccgcggtggagcacctatttcacgtcgccctcgacgcgcatgcgtcgctggttccaccactcggactcgacgacc
>gene6Best maize hits:
NM_001174809.1Zea mays uncharacterized LOC100382044 (LOC100382044), mRNA >gb|BT062978.1| Zea mays full-length cDNA clone ZM_BFc0013I21 mRNA, complete cds
NM_001196777.1Zea mays uncharacterized LOC100502299 (LOC100502299), mRNA >gb|BT087700.2| Zea mays full-length cDNA clone ZM_BFb0162H19 mRNA, complete cds
EU975938.1 Zea mays clone 506018 hypothetical protein mRNA, complete cdsEU964704.1 Zea mays clone 280953 40S ribosomal protein S17-4 mRNA, completBest non-maize hits:
NM_001055203.2 Oryza sativa Japonica Group Os03g0103300 (Os03g0103300) mRNA, complete cds
AB433794.1 Oryza sativa Japonica Group qLTG3-1 gene, complete cds, haplotype: 5AB433793.1 Oryza sativa Indica Group qLTG3-1 gene, complete cds, haplotype: 4AB433792.1 Oryza sativa Japonica Group qLTG3-1 gene, complete cds, haplotype:
ATGGGGGAGGGGCGTGGCGGTGGCGGTGGCCGCGGAGTTGGTGAGGCGGGCGTGGAGGTAGACAGTCTTGTCCCTGGCGTGGGTGAGGAGCGCGGTGGTGGAGGAGCGGATTGCGGATCTGCCGCAGTGGGGAGGCGATTGACAGCGGCTCTGGTGTGGTGGGAGCGCGGTGGGGGAGGAGCGGATTGCGGATCTGCCGCGGTGGGGAGGCGATTGAGAGCGGCT
GTGGCGTGGTGGGAGCGCATCCGTGCGATGAGGAGCGGAGGGACAGGATTGTGCGGCAGAACATGGTGCACTATTGTGAACGTCTACGTTGAAGGTTTATAG
agtagtagagatgacaaaaaacttatgcattgcgtgtaataccaactatatatcggtaaaattactggagaagttcgaatgtgaaaatttcattgaagattttattttaaagaacactaaaagaataatgctttttaaaatgaagattatataatatttagtcatcgttattttatgtgcacatatatacatagcattacttaatatattttttgctatattttgtacggagcctcccaaaatgcgaggacctgttatatatatatatctctactactccttaagagggtaaggagggcgtccacaccctcaccgcggctccgccctccccaccccgttgatctcgctgccaccgcgcacgcccccgtcttcgtctcccccgcgctaatctcgccgcggcagtgcgtcctccgccccaccttctcgaaaatgtcgtcgcccccataaccgcgcgggccggcaccgcggcgcgcagatctcgctccggctcctcgctggcacaaaccacacgcgcaccctcgacccatggcatccccaaatcccgcccaggttcctctcccttcccattcgcggacg
>gene7 Best maize hits:
NM_001196826.1Zea mays uncharacterized LOC100502348 (LOC100502348), mRNA >gb|BT087877.2| Zea mays full-length cDNA clone ZM_BFb0280P11 mRNA, complete cds
BT067383.1 Zea mays full-length cDNA clone ZM_BFc0037B10 mRNA, complete cdsEU975326.1 Zea mays clone 487586 mRNA sequenceDQ244682.1 Zea mays clone 10027 mRNA sequenceBT016603.1 Zea mays clone Contig436 mRNA sequenceHQ140759.1 Zea mays Mu transposon insertion mu1013340 flanking sequenceBest non maize hits:XM_002444661.1 Sorghum bicolor hypothetical protein, mRNA
AP006170.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15
XM_002454373.1 Sorghum bicolor hypothetical protein, mRNAAF133839.1 Sandersonia aurantiaca papain-like cysteine protease (PRT5) mRNA, complete cds
NM_001070477.1 Oryza sativa Japonica Group Os09g0564000 (Os09g0564000) mRNA, complete cds
AK071733.1 Oryza sativa Japonica Group cDNA clone:J023107H18, full insert sequ
ATGTCGTCGCGCGTCGACATTCGCGTCCCCAAATCCCCGGTTTCTCTTCCTTCCTGTTCGCGGACGGCGCTTCCGCGCGTCGACGTTCGTGTCCCAAATCCCGCCCCGGTTCGGCGCTTCCCCACATCGAGGCGCCACACCATCGCCGCCGGTCCCGATAGCGTCGACAGCGCGTGGCCCCATCGTTCGCGAACCAACCTGGCCAAGGGTGCCCTGCTGCTGACGGACAAGGACCTGGAGTCGGAGGAGAGCCTGTGGAGTCTGTACGAGCGGTGGCGCAGCGTGCACACCGTGTCGCGGGACCTCACGGAGAAGCAGAGCAGGTTCGATGCGTTCAAGgtgaactctaggcacatcggcgagttcaacaagaggaaagacattcctacaagctcggcctcaacaagttcgtggacctaacgcagGAGGAGTTTGTCAGCAAGTACACGGGCGCCAAGGTCGTCGACCCCGACTCTGAGGCTGCCGCTGCCAGGCTCGCCAGCGACgtgtgcgtgtcgtccagcgacgagtcgccgccgcaactggccgcctctgccgtgaataccatcgtcaccgccttgaaggaccactgagtcgtcaccgccgtgaacgtcgttaatttattctgtattgcagACTGGAGAGACACGAAGCCGTCACCGCCGTGAAGGACCAGGGGCAGTGCGCCAGCTGCTGGGCCTGGGCgcggtatcatttccttgcttgttttacaagatccattttgatggtggccatgtagtcttagctgagtgacgacttgtttttcatagatctgatctgagtttgtcatgatgtcgtgcggcgatctgtttgtctgagttcggagacaggttagtattctatcagatccaatggttcattggttttgtcacttggacatggattcggtggtttcaggctcaattgttcgtctcctgttgt
ggtacgatcagaaacagatactgcagccgttgcctgcataccaggtgaattgtgtggagaccttcggtccattcttatgttaactgttgatcacgcttgtggccttctggttgtttgtccttcttaaacttcagatgcaaggagggacactagccgtatgtttgagagacactagccgtgcagcacaatcagatgcaaggagggacactagccgtccttcttaaacttcagatgctgatctcaattttttcacaaagacactagccgtgcagcacaatcttacggtgtctagagcatgaaagctccattttttcacagcatgtgctttgattttatggaggaggcgtatgtttttaccacttactcatgaaggctccaattttcattagtgcatacccttgttttgcagttttcatgggtggtacatgcattttcttccactaaatatcttgaagctatacattgttgtatagcttcccattgagactgcctttttatttgaatgtaacagggacccttttgtaatcaccttgttctttgccttgtcctttgaatgggtaaagctagatctgtcaatagaatacacagcctgtttgagagagctctagctgatgataagttgcaaaagtctgtcatgttgtggatttatccttgcttattgtttaattactaatcactatattttcattttaggtagcacaggaacaccagttggaaacaaaaatggagaaagcagctcagaatgaagctctgttttgtttttttcacagcaaccaagtgcaactagattaattaatctcacacatgagataaagcttaagaaacatggtcttttgccttcgcacaatcattttagtggatcaaagatatgtgatgatcaaaccaaatcaactccaaattcagatatgggttctttggattatgaccttaccaacaaaagctagactacaaaagtttgttctaactcctaaacgttatgttcttttatgactcctgaaagtacagagtgacatatactatgtgcagatttttgtcgtttcttactctctgcttgcacttcatataaacaaattaatggttgtagttcttgtgtttcaacttactgcaatgttatatttgaaaaaaagatattattatattcctttccctgcagtattccatgataacctctatttcttcattaggcaccacatttttttggccataatgctaattattttttctaaaactcaatgttggatatttacaccagcattttcatgcttaaaaatggcattcaaacagcctataaatccaataccacgcctaaaatgaatagtaaaactataactataagaggtttcattgtgcaGATGTCCCACTCCTTTCGTCCCGTCGAGGGTGTCGAACAATGAACGTGTTCGATTGTTGGTCGTCTTTGCTGCTGTGCAGCTCGGAGTTGTATGGGCTGCACAGATCGATGGATTCCtggtaggatcggatcttaaggacctctatctattttgttcatctgacaaataaaaacaagttcagacagttcctaaatcactgaaggagccgcatcaaatagagcttgactatataaaaatgttgaaaagttataaaacaatttcaaattttcttctaaataataaatagctctccctctataaaaagaatttagaactgacattagcttcggtttgtgccaaaattgaaaccgaataagccgtcaaggtattgtggctttggatctagcccttaagcatggtctcttagaactgacattagcatctaatctcaggatacacgtactcagtaatctatattttataataataatttgtacatgcacttactagatgttgaattatatcctcagcatgcataacatcttgtgagaactgagatcctgtcatagttgctgtttgggaagccaatatctcaatgggatcttgagtagtagcatcctcagttactttgaaactgcggaatgattttctcctgtccattaacagtttttcaaattttctccattccaatttatcatagaaggcactgtatatgatagcgtacagtttagaaatcaaatgttgccgccataataggtaccacatgttgtcactggttgtatgataattacttgatcttactgaccctgcttgttcttcaGGCTGGTAAGCAAGCACCACCAGAGAAGTTTGTGATCCCAGCTAAAATCAAGCTGACACTGGAGCCATGGACGTCGAGCTTAAGAGGgaggtcatcaagaaggcatacgagatggaccttgcccagttgtacaaccagtgacactaccgctacagtttctcaaggataggggtgttgcttagcttgtagcaaccgataacaacatttatttttgtacttcgaactatgtttgaaagcttgtctttcttttcagactgtggttgactggtaaatcaattgcAGAAAAAAGCTGAAGATTACAGAAATAGTTTGCAAAAAGAAGCACAAGCAAAAGCTCAAGCATTACACTTTGAAGATGAATTAG
ctagaaaaagaatgtcggtattgaaaagtcgctttttatatcttcttttagctacttcctataatgtttataatgttgttgcgctgctatgaagctagcacacaatttaaccaagcatatccattttggcacacagatcatgctccacagaggcgataggatgctgaactcgtgaagataaaagaggcatcttcccttaggaaagaagctaggcgtgcaacacccgacatctaactattctttcaatatatactgagtactgactcgtacaatatagcttttttactgtctttttgcacacacttgttacctttttcatatcacttacaaccatattgaatccttgatataaatctgtatcttattatatcttgacctggcccatgtgctattattttgtcagttatcttaactgttgcacaactatgtgtttttcgattccacatgtatttaccatttcttttactttgcagttgtatgtatagttaggacaatctggtgactatatttattggttcaggattggatctctagcctcacaagatcggcgacttgtatgataaattcacttacagttaagttacctttggtcaactggattctggggcatgcacttgtagctactggcaacttttagaccatttttgtaatcttttcaattgaaattcgtggctatttgagagcttctctgcgtttcactgatatcttccttatcaccggtgttgacgcgtggtagtggaaaagacacctaaacaattcatttttgtttggttggcaatgggagatcacacctaaacaattcatagcattaaggaatgcattcgacccttaccaacatagagctgactaacttgcgaaagttagcgaggaaccttccatgacattttgctctaggtattgcttttgacagtgtcaatattacttttgactataatagattttacttgttgtgttccagaataatgtgtataatcttgcataaagtcaggccctgtgtttcttaagagcaaaggactgagttgtgttgctactttgaacatgaaaataaaatgtggttgtgcactatgtattgcatatctagaattatgta
tgaatcatctacctcctgattagataagcgttctcaattttttaaaatatttaccagatattctattctatgctactcttgtaatttgtttcattcaactatatagggagtacccagagtaaggagcactctgccagtttagatgcatggaggggtgttgatgcctttgcgacatcaagcaagtttggtaaacaaactttcagtctagcagattacagagagcactgagagaacctgttttatcggtacgacattgtttactcactataacttctcacacagaaaacgacatagtgatctatccatctgagtcaggctatttatttgacaactgatacaaattgatgtagcaacaaagttttccagttttaaaaatatttttgtatgattggaattggagggttcaaatgatgaagggattttagaaatctataatatgtatgccttttctttagtctccctgcggaatgaggggctcaacttggttaagagcaggttagctaaatgctctatgagagacggagttctccacaactttctttggggctctatgcaacagccactcatcaactgtagtaggaggagggcatttatacataagttattgtagtaatatgtttccgttgcaacgcacgggcactcacctagtatatatatatatactagctgaatgcccgtgcgttgcaacgggaatatataataccagtacactacgataacttatatacaaaatgtgtgttataccgttataagaaaatgtttcataatcaatttatgattctggccatacataaattttgttatttataatctatttgtttcaccactatattgcaaccatcagtatcatgcagacttcgatatatgtcacgatttgcatggtctcatcattggagagcacgtttcacacataccggaagaaattccctttacatcgttagtcatcagacacgtaccaccgtacacttttgcttaaacaaaaaggcaagtgtgtgtttacgaagagaattaaaggcaagccagcacaaaagctaccccaacggtggcgaggatgacgaactggtcattgttgtcggtcctcctctgcgtcacctctggcgccaagatgacgccacagtcctcgatatagttgtcgtcgaacgcgcgcgacataccgagtactgatgactcttggctgggctgtaaaacgagtgctcccggggctcatcagcaaggtagtacccctggctgttgcaccaccggatgcgctactcctctacatacatcgtgttcaaggacactcatacaacgtaagcaacgaccatcgtctcagcgcacaagaattcatggccagtcagtagcgacttacgtggcaggttgggcttcaggtggacgatgagctggacgacgtgatggcgtcgtcgtcgaatgcggtgccaacaacccgagagtcgtcgacgttggcgacgaccatgaggtccccctgcttgacgatggacagcgcggagcagccgctctgcaccgcgtccaagcggcggctgcgccggagcttgtcgtacatagcggcacatgcggccacgtaggactgtttctagaggtcgaactgatagtcgccaagtttttcttgtcgtcgatgagcgaccccaacacgagtgcctcctgttaatggtgtttgttcggggttttcaagtaagaaacatgaattcatgtttggcgttggtttataaaaatgactcacaagtcagatctatggaaaaaatattacgaagaataaatatcacgcatgcaaaaaagaaatttaagttgaaaacattattcaaacaaaagaaattgcatgcaaggctcttctttaaatactactccctccatccaaaaatataattgaagaatctcggtgatacttatctactacacgcattgtgcaagggtagcaggtggacttggggagagatatagtagatgtattttctgttataaatgtaaacataaacacatatgtggtgtagtggtagctactgctattatttgtttgagaggttttgggttcgaatccccttgagaccatgtttatttttttaattttagctaggcgtcggctgtacgggggaatgagaatgagctttacagggaggggaatcggaacgcggggaggagggaatcggaaaggcacacaacataggaatggatgcgcaatggggtagcgactactattacagtcttaataagtagtatatatatatatatatatatatatatatatatatatatatacgttggtttttaaggtgatctggatatttgagaatcgtgatttaaacatatctctctattcctggataaatcaagagggtgtttgaatgcaatagaactagtagttagtgactaaaattagttgagacattcaaacaccctagctaatagttcagctattagtttttttgtaaattagttaatagttagatagctatttgttagctagctaatttcactaataatttttagtcaactaacgattatttctagtgtattcaaacacccgggaatcttaatccaaataaaaacagacgatattattaatattctttggtctaatatttagacagactattattaggtaggatcagccagtcgtgctgcagcaaagtattgagtcgaattgtttgaaatatcagcttagttttgcaagattccaaggtccaggtacatcacgtatcacttagttttgcctgacggctgatggtcttcatacattattagaaggaaacaagcgcgcaacagaaaatcaactagaggccgtcagggacacatatttacattattagactggtccaacggaagtttaaaaagcaaaatacaactcgggcttgacacctgatcggatggctttgagttagcacgtactacttctacttgatctgatcggatggctttgagttagcacgtactacttctacttattgaaggactcgagaaagaagcggttggggtctccttttctgctcaaggtcctcaaaataaataagttgctttgattcatccaacagatatactgaatgaccaaatgtcaaagctagaatgacgaagcgatgaacgcaatagacacaacaaggtctggcaacaaaccagatcaagggtagaaacacaactttatccttagtgtttgtattaaaacatatgtatagatattaagagcacaattgcaatttcgtctgggttgcgtcccctgctataaatagatgaacattacccacatactgttcacgtgatcattgaggaaagtaattagagaaagcccaaagtgcaatctcaattattcattctccgaaggttactcttgtatttcccttcgcgtgaagccgaaggtacaaatgtaatcatttattcttgtattgctcaaagtatggtcttatcaacatatatataaataaaagaaaggaatagttaatctcttatcattttctcatcattttaacatgaataccttcgtcatattataaaccttcacttacaaacaaccttcagcgaaggattgattgaaggtgaagttacatattcactatcattttcgtctaagaactattatcttcaagagaagataatgcttcgaaggacgaatgtccttaatgttcaatattgtgttgccttatttttgaatcacagcaattgaaaacaagtaaccaacattggcgctcacctccggtgaactcacttccacaacaatgaccacgatcagccatcgagcttcgtcactagcaatgacgaagctcatactctctatcacaggcggttcaagcttcgag
ccagccaacaagaagcaaaaaaggaagcccagcgaagtgtgcaacatgttggaatgcagggaccctatgtcaaatccaaatggtctcatgttccaatcactttctctcaagaggacctttaactcaaagactacccacacaatgatgcc
>gene8Best maize hits:AC196774.5 Zea mays BAC clone CH201-435B12 from chromosome 5, complete sequenceAC191361.5 Zea mays BAC clone CH201-216O9 from chromosome 5, complete sequenceAC160211.1 Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequenceAY555142.1 Zea mays BAC clone c573F08, complete sequence
AF464738.1
Zea mays cultivar B73 putative gag protein, putative gag-pol precursor, putative transposase, putative copia-type pol polyprotein, putative copia-like retrotransposon Hopscotch polyprotein, putative gag protein, putative prpol, putative prpol, putative pol protein, putative pol protein, putative gag protein, and teosinte branched1 protein genes, complete cds
AF049110.1 Zea mays retrotransposon Cinful-1, complete sequenceAF123535.1 Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cdsJF791320.1 Zea mays subsp. mays cultivar Yu87-1 clone 87-1tb1to69k, complete sequence
AY530951.1Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds
AF049111.1 Zea mays retrotransposon Cinful-2Best non maize hits:
EU053446.1Mini-chromosome MMC1 retrotransposon xilon, complete sequence; hypothetical protein gene, complete cds; retrotransposon xilon, complete sequence; satellite CentC sequence,; and retrotransposons cinful and ji, complete sequence
XM_001545031.1 Botryotinia fuckeliana B05.10 hypothetical protein (BC1G_16418) partial mRNAAC243237.1 Panicum virgatum clone PV_ABa020-K05, complete sequenceAC243260.1 Panicum virgatum clone PV_ABa103-K10, complete sequenceAC243249.1 Panicum virgatum clone PV_ABa094-D05, complete sequenceAC243250.1 Panicum virgatum clone PV_ABa094-D10, complete sequenceJN800064.1 Saccharum hybrid cultivar R570 isolate scTat_7.1 retrotransposon, co
ATGGTTATATCTTGTGTCATAAAAGGATTCTTGGTCCACAATGTTCTAGTGGATACATGCAGTGCATCGAATATCATCTTTGCCAAAGCTTTCAGACACATGCAAAAGCAAGAAGATAAGATACATGATACAACACATCCTCTATGTGGCTTCAGAGAGAAACAAATAGCAGCACTTGGCAAGATAACAATGCCAATCACCTTTGGTTACATACACAACACAAGAACTGAGCAAGTTGTATTTGACATAGTGGACATGGAATACCCTTACAATGCAATCATTGGAAGGGGAACATTGAATGCCTTTGAAGCTGTGTTACACCCAGCATACTTGTGCATGGAAATACCATCAAATCAGGGTCCAATCTCTGTACATGGAAGTCAAGAGGCTGCAAGAAGAGCCGAAGGAAACTGGATAGACTCCAAGGCTATTCACAATATAGACGAAGTTGAAGCTCACGAGCAACAGAAGCACATAAGGGATAAGGCAGCTTCGGCAGATCAGCCAAAATCCATACTCTTATGTGAAGATATAGCTGATCAGAAGGTGTTGTTTGGATCTCAGTTGATCAAAGAGCAAAAAAAGAATCTAACAAAGTTCTTGTTCCACAACAAAGATGTATTTGCTTGGTCAGCCAATGACCTATGTGGTGTCAACAGAAACATCATTGAACATTCTCTTAATGTAGATCCTACCATCAGGCCAAGGAAGCAGAAGCTTCAGAAAATGTCAGAG
GATAAAGCCAAAGGAGCAAGAAACGAAGTTAAAAGACTTCTCAATACTGGAGCGATCAGATAA
gtcatttacccacaatggcttgctaacactataatggtaaaaaaggcaaatggaaatagagtatttgtattgactttacagatctcaacaaggcatgcccaaaggatgagtttcctttgcccaggatagactcactcatagatgcagcggccactttagagctcatgagcctgctagattgttattcaggatatcaccagatatggatgaagaaagaagatgagcataagacaagcttcataacccccaatggtacataatactacctttggatgcctgaggggctctagaatgctggaggaagcttcagcgggatgatttcaaaagtgttgaatacccaaattggtaggaatgttcgctatttgctctaaggttcagcacttgtttcgtcttcttcatcatcatactacaaaatcataagtatatcagcacatgaagaagagaagaatcagaaaacattatggaaacagtttgaaatatacctcatccaaaagctcccaagcttcggcaccagcaagatctatgccacctttcatccaaattagtgtgataaatcggttggcaacatttctagcttcggttgacgttgttgctatatcatttgaagaaatatcaaaatttggcttcccaacagttttcaggtgggagcatccaaccttctcaagatcaaagatgtgacacaagagggaaccagtgcacaaaagtcaccttagcccatcattacttcgccgaaggtatctatttctccttctacccacttcagcgctccaggtaagtcgttaggggcataattctcttctttagacgtcgtcccgaccgagtggaatacttcgcgtagccagttagagcatctgtagacaatctcaaaataattatcctgaagatttttttcaaagtttctactagctttgagttgtctcggtccttcgttttaacttcttttttcaaattgtcaaattcaagttgaaggcgacaaacttcgtcggcatgatctgttttaattttctccagctcagttgttaatcgtcggatgtctttatcttgattcgcatttttgtctttgaagcttgttttcctcttcctcatcttcattagccctctgagatttggccagatccccgtttaatgactgaattgtgacgtctttttccttatttgcttctcaaagtttttcattttcaatttccaacttagaaataacaaactcaattttttgatcctctggatcttgttgaagctttaaggctttactcagcagaaaactttgcatttttacaaaggttgaaaaaatttaggtatcttactatttttattctaagacagaaagtatgatgcataaacgaagctttacttagattacgtaagccaagctaccggcgatatgttgtttccttatgctgcttagctcactttcgagcttcaagaagccaatattcttcatcaaagtgttaaccactctagccctgtcgcggtcaggaatgcactctagtaaattcaccttccaaagcaaactccttcagttcagaaatttcttcagcacttagctccccactagttaggtgtctgaagtcgaaggtggcctctcccaggcttcagtttcttgcaaagacgaagtggtcgtcccaactttttaagctctacagcctttgaaagtcgcctacaggggggtgaataggcaaatctgaaatttacaaactttaagcacaactacaagccggggttagcgttagaaatataaacgagtccgaaagagagggcaaaaaacaaatcacaagcaaataaggcggatgacatggtgatttgttttaccgaggttcggttcttgcaaacctactccccgttgaggtggtcacaaagaccaggtctctttcaaccctttccctctctcaaacggtcacctagaccgagtgagcttctcttctcaattaaatgggacacttagtccactacaaggaccaccacaacttggtgtctcttgccttgattataattaagttggaaacaagaaagaaggaagaagaaaagcaatccaagcgcaagagctcaaaagaacacaaatgtctctctctctagtcactaaattttttggagtgattccggacttgggagaggatttgatctctttgattgtgtcttggaatgaagtctatagctcttgtatgaggtttgatggctgaaaaacttggatacaatgaatggtgggtggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn