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Page 1: rna.genomics.purdue.edurna.genomics.purdue.edu/.../=genomics_predictedgenes.docx · Web viewZea mays cultivar B73 putative gag protein, putative gag-pol precursor, putative transposase,

acttcatcaacatcgacctccgactccgatgcgccgtcagtaacttctaagcgccaagagcgcaagaagtttagtaagatccccttacactatcctcatacatctagacatactccattactttccgttccattaggc

>gene1 Best maize hit:AY664414.1 Zea mays cultivar B73 locus 9008Best non-maize hits:HM596859.1 Zea diploperennis bio-material USDA:GRIN:PI 462368 bz locus, partial sequenceHM596856.1 Zea luxurians bio-material USDA:GRIN:PI 1441933 bz locus, partial sequenceAC243120.1 Gossypium raimondii clone GR__Ba0131I15-hog, complete sequence

AAACCACCAACTTTTGATGGCGAAGATTATGCTAGGTGGAGTGATTTAATGAAATTTCATCTAACCTCACTCCACAAAAGTATATGGAATGTTGTTGAGTTTGGAGCACAGGTACCATCTATAGGGGATGAAGACTATGATACGGACGAAGTGGCCCAAATCGAGCACTTCAACTCCCAAGCTACAACCATACTCCTCGCCTCTCTAAGCAAGGAGGAATACAACAAGGTGCAAGGGTTGAAGAATGCAAAGGAAATTTGGGACCTTCTCAAAACCGCGCACGAGGGTGATGAACTCACCAAGATCACCATGCGGGAAACGATCGAGGGGGAGCTCGGTCGCTTTCGTCTTCGTCAAGGAGAGGAGCCACAAGATATGTACAACCGGCTCAAAACCTTGGTGAACCAAGTGCGCAACATCGGGAGTAAGAAGTGGGACGACCACGAGGTGGTTAAGGTTATTCTAAGATCTCTTATTTTCCTTAACCCCACTCAAGTTCAATTAATTCGTGGTAATCCTAGATACCCACTAATGACTCCCGAGGAAGTAATCGGGAATTTTGTGAGCTTTGAATGTATGATTAAAGGATCAAAGAAGATCAACGAGCTTGACGAACCCTCCACGTCCGAAGCACAACCGGTGGCATTTAAGGCGACGGAGGAGAAGAAGGAGGAGTCTACACCAAGTAGACAACCAATCGACGCCTCCAAGCTCGACAATGAGGAAATGTCGCTCGTCATCAAGAGCTTCCGCCAAATCCTCAAACAAAGGAGAGGGAAAGACTACAAGTCCCACTCCAAGAAGGTTTGCTACAAATGTGGTAAGCCCGGTCATTTTATTGCAAAATGTCCTATATCTAGTGATAGTGACCGGGGTGACGACAAGAAGGGTAGAAGGAAGGAGAAGAAGAAATACTACAAGAAGAGGGGCGGCGATGCCCATGTTTGTCGGGAGTGGGACTCCGACGAGAGCTCCACCAACTCCTCCGACAACGAGGACGCCGCCAACATCGCCGTCACCAAGGGACTCCTCTTCCCCAACGTCGGCCACAAGTGCCTCATGGCAAAGGACGGCAAAAAGAAGAAGGTTAAATCTAAATCCTCCACTAGATATGAGTCCTCTAGTGATGATAATGCTAGTGATGAGGAAGATAATTTGCGTACCCTTTGTGCCAACCTTAACATGGAACAAAAGGAAAAATTAAATGAATTAATTAGTGCTATTCATGAAAAGGATGACCTTTTGGATTCTCAAGAGGACTTCCTAATTAAGGAGAACAAGAAACATGCTAAGGTTAAAAATGCTTATGCTCTAGAAATTGAGAAATGTGAAAAATTATCTAGTGAGCTAAGCACTTGCCATGAGACAATAGACAACCTTAGAAATGAAAATGCTAATTTGTTAGCTAAGGTTGATTCTCATGTTTGTAATGTTTCAATTACCAATTCTAGAAATAATGATGATGATTTACTTGCTAGAATTGAAGAATTGAACATTTCTCTTGCTAGCCTTAGGATTGAAAATGAAAAATTGCTTGCTAAGGCTAAAGATTTTGATGTTTGCAATGCTACTATTTCCGACCTTAGAACTAAGAATGACATGTTACAAGCTAAGGTTGTAGAATTAAAATCTTGCAAACTCTCTACATCTATTGTTGAGCATGTATCTATTTGTACTAGATGTAGAGATGTTGATATTAATGTTATTCATGATCACATATCTTTAATTAAACAACAAAATGATCATATAGCAAAATTAGATGCTAAAATTGCCGAGCATAACTTAGAAAATGAAAAATTTAAATTTGCTAGAAGTATGCTCTATAGTGGGAGACGCCCTGGCATCAAGGATGGCATTGGCTTCCAAAGGGGAGACGATGTCAAACTTAATGCCCCTCCTAAAAGATTGTCCAACTTTGTTAAGGGCAAAGCTCCCATGCCTCAGGATAATGAGGGTTACATTTTATACCCTGCCGA

Page 2: rna.genomics.purdue.edurna.genomics.purdue.edu/.../=genomics_predictedgenes.docx · Web viewZea mays cultivar B73 putative gag protein, putative gag-pol precursor, putative transposase,

CTATCCCGAGGACAAAATTAGGAGAATTCATTCTAGGAAGTCTCACTCTGGCCCTAATCATGCTTTTATGTATAAGGGTGAGACATCTAGCTCTAGGCAACCAACTCGTGCTAAGTTGCCTAAGAAGAAAACTCCTAGTGCATCAAATGAACATAGCATTTCATTTAAAACTTTTGATGCATCTTATGTGTTGACTAACAAATCCGGCAAAgtagttgccaaatatgttgggggcaaacacaaggggtcaaagacttgtgtttgggtacccaaagttcttgtatctaatgccaaaggacccaaaaccatttgggtacctaaagtcaagaactaaacttgttttgtagGTTTATGCATCCGGGGGCTCAAGTTGGATACTCGACAGCGGATGCACAAACCATATGACAGGGGAGAAAAGGATGTTCTCCTCCTACGAGAAAAATCAAGATCCCCAACGAGCGATCACATTCGGGGATGGAAACCAAggtttggtcaaaggattgggtaaaattgctatatcccctgaccattccatttccaatgtttttcttgtagattcattagattacaatttgctttctgtatctcaattatgcaaaatgggctacaactgtctctttactgatgtaGGTGTCACTGTCTTTAGAAGAAGTGATGATTCAATATCATTTAAGGGTGTGTTAGAGGGTCAGCTATACTTAGTAGATTTTGATAGAGCTGAACTCGACACATGCTTAATTGCTAAGACTAACATGGGTTGGCTCTGGCACCGCCGACTAGCCCATGTTGGGATGAAGAATCTTCATAAGCTTCTAAAGGGAGAACACATTTTAGGACTAACAAATGTTCATTTTGAGAAAGACAGGATTTGTAGCGCATGCCAAGCAGGAAAGCAAGTTGGTGCCCATCATCCACATAAGAAAATCATGACGACCGACAGGCCGCTTGAGCTACTCCACATGGATCTATTCGGCCCGATTGCTTACATAAGCATCGGCGGGAGtaagtattgtcttgtaatagtggatgattattctcgcttcacttgggtgttctttttgcaggAAAAATCTCAAACCCAAGAGACCTTAAAGGGATTCTTGAGACGGGCTCAAAATGA

gttcggcttaaggatcaagaaaattagaagcgacaacgggacggagttcaagaactctcaaatcgaaggcttccttaaggaggagggcatcaagcatgagttctcttctgtaatactcaaaattgtgtacaaggaatatatagtgttttcctcatttgatgtgtctcatttgcatcataaaaagagcatacctgaaatttagagtttaattcaaacaaatgacaaaaaatgcatcatgttggagtttatatgtttgtgcattaaataaaataataatgttaatggtaataagataatgattgctagaagttgaattaaaccctaaattaaaactagggttttcaaaaataagagaagaaaaaagggtataaaaatataaataatatactattatctccaagatttatattctcatttcacaatatgattggaggataaaaatctatacaatgttcgaatttaaaattcaaattcaaaccaaattttgaaatgaagaaagaaaatagaaaaaaataaaaaggaaaaagaataaaagcctcatgggccgccaaaccatcatttcggcccgctccagcttcccacccgcgcagcccacacctgaagctcgcgccgacgtgtgggtcccgcttgtcagccgcttttacttcgcgcgcgcgctgggtgactctctgtctggtgggcccggggcgccagactcttcgtccacctccgtaacaaacgcgtgagaatcgaccgcgcctgagcaccgtaatctccggaattcggttgcgattggacctagtctcgcggggaaagtgggggcataagaagacccggcgtcgcccatcctctgccctcgctaatcttctcaaaatcgcacgcgcacagaaaacccagagcctcgcccatgctcgagtccgccgtcgccggcttgtgcttgcaacgccacttgatgtccgggaggtagttagggagctgcgcgagcgcactaggaaggcatagcaatcctcaatttggtggtcgggacctcggagggtggttgatttcgcgtcgtcgctggaacaccgccgcggcgccgcatcgtgccgcggacccagctctgcacagctcaaacataggtaagaaaaccctaggccatttcgctttgatctcagtaccgtgtagcgcgtttcaatttgcgagttggggcacgggttcgccggattggatgaccacggcggagcgccgccgtggggatcgcggcgctgcgggggtcctaggtcccgaggtgggggaagagcgtcgggaccgtccgatctgggcgaacggctgcgattagaagttagcgtaccccttcgccactttggtcgggtaccgttgatctcgaatctaacggtggtggttagatctggtttcataaactctgggccgtcggatcccgatccggcggttggtaacgcataccggttcggggttgagtgatctaatctgagccctcagattctaatcgtgcggcccacatctacggataccccttcgcagggactttttgcttaagaaaccctggatttattagaaaccaacccgcggtccacaggaacagtccacagagtcttggaaacacttgcaccgaaacccctgagttttctgggattcgaggcctagttcaggggatattaaaaaccgagaaaatgattatagaatttagtttttaatacaaaaacaattctagaaacttgtaaaattcatagaaattccatttttgacccaaattgagccattccaatttctaaaattttgtaataatattctctaccatttagagtcactgttttgacatgaactctgatagaacattaatttaacatttaatcctaatttaatcacattaaaccttaggaaattcataacttgaaacctataactccaaatttagtgattccagttcctatgatctcattttaatgtatagatttttactgtatattttattcatctgtttggtgtgatgttgattttggctatactatgtatgtattgtgttgatgcgaatagacgagcaagccactgtggaaactgaggttcaacaagtagaagtagctgagcaggagctcattgaaggcaagttgtgcccttgatcacttacttttcccaaccatgttcttattaattttaatgatctgcataggtaaattttgatgggagactttatgttaccccagttttgattacctctatacctt

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gttcacccctgaaataattttggggagggcgatcagagtgcttttgtggatgggtatggagttacactacacatgattacaatgatattatcttaatattacactggtcatgttaagatcattaaattaatgggaacatggagcgacaaccgggtaaaacagtggtacctcaagggtataatgggacggccttggctgggtaattaggaaagctagtggaagactaccttacccgaaaggggcaagggcagtaggggagaggtcagtgcggggaggtccctggttgattttgctgggatggctgtcagccaggaaccctgaactggatcttcctataaactgtagcgggttttcggaagctagtggaactttgtaaaggcctcgtagtggatccctagccattcacctcggtagtgtctaaggtccttgcaaacccaggcgacatgggatacacgacttgtgggtaaagatgcgcaacctctgcagagtgtaaaactagtatactagccgtgctcacggtcaagagcggctcggaccctcacatgattaattatggaacttaaatttaatttgacattgcatcgcatttgggattattttactattactgttctttattattattaaggtttggtatttacttacacttagtaattgctaataaaattttgaccaacttataaaagcaatgctcagcctcaacctctatttcattgatcagccttacactacatgaactcccacctttggtgagttcatgccacattattccccacgacttgttgagctatgaacgtatgtgagctcactcttgctgtctcacacccccccacaggagaagatcaggtggtcgaagaggagctgcctaacactgaggagttcgatctgatctaggtggcgtgtctcggtcgacattggcgccgacgatccttagttcattttatacttattgttttcttttgtaataagacttccgctatgtaataaatactctgatgtattatgacatttatctctatacactctgttattatatatgttgtcttcttggcgcatgtatgagatgcacccggctttgtcctttaaaaccgggtgttacatcttctccctacacccctcaacaaaatggtgtagtggagaggaagaatagaactcttttggacatggcgagaaccatgcttgatgatacagacttcggatcggtttgggcgagcggtcacacgctgctacgcatcacgctatatctacatcgatctcagaagacatctatgactctaccggtaaaagccatattcataatttagaagtctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgaaattcaaagctttgaattcgtataattaggtatatgtggagtacttcagtgaaccaatggactacaaaactgagccgagctaagaattgtggacattattatcacatgaaatactccttggtttactaattactaagagaatgttgtcaaggaataacaacaaataccacaattagtgctattgggtataatgatatatttgctcaaataaatgattcatgccccgtatcctttccagttcaaggaaagaaggaaactcaaatgcaatttagaccactgtaagatgaaccaataaagttattctgctacctagcaccatggtgtatctaatcaataaaaaacaaggatgatggttttatttataaagtggtcaactatattattttaaacaaattcagatcaggcaaggacttgactttgacacacaaaatgagtatttaccttactacatcatctgaggagcttaaattttttaccacgttagccaataggctttggcagaagttaaaatgtggggcagtatctaataaagcatccatgcaacggacaaccagagtatgatagtgggg

>gene2 (reverse strand)Best maize hit:NM_001158676.1Zea mays LOC100285786 (si618065b11), mRNA >gb|EU973949.1| Zea mays clone 424851 nuclear ribonuclease Z mRNA, complete cdsBest non-maize hits:XM_002453594.1Sorghum bicolor hypothetical protein, mRNAXM_002436496.1Sorghum bicolor hypothetical protein, mRNANM_001052815.1Oryza sativa Japonica Group Os02g0214300 (Os02g0214300) mRNA, complete cdsXM_003571604.1PREDICTED: Brachypodium distachyon nuclear ribonuclease Z-like (LOC100834210), mRNA

TTACTTCTCCAACGATATCAATTTCTGTAGGTAAGCctaaaaattcacaaaagaaatccagctccaaccattgtttgattttctttataagcatgtatgtcagcagggagaaaaccaattgaaaagtctacagtggtgcagagttgggacagagcgaggttggtttacccacCTTAAGCAGTGGGCGCAGCCACTCTTTGCACTTGTAAGAGCTGTGCAAGAACGCGATAGCTGGTTTTCTTCTAGGGACGGGGTCGTCAAGCTTCAGCAGAAGTACACGTACTCGTCCTTGTTCACCTAGctgctttgaaaggaaaaaagtagtgatagtttctggttagaaaaatagaggggaaaataaaaaccagcagtaaggcgttgactcggtagtttagtgtggggaatacatgtgagtctggatctgagaacctagaaaaaaggatgtcgactatcaagggtgcacccaagtattcagcagagggatgcaatggagtctgcatgtatgtggagtaagagtccactattatattcttgctctagatctc

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gtgaggctgcttagatgcgattggctcctgtaggtcgtaggtgacacgatctggctgccggttacCTCAGTGATTAGGTTAAAATTTTCTTCAACCAGCTTCTCCACCCAGTTTTCCACCTCTTTACTGGGGCACGACTCCATTGGATTTGCctgagattaccacagacaatcaaccctgtaggttcaaccattttagcagcacattcatttaccaagagtccaagatactgaatgtgaaccaaagccctttcagtttacacgataatttgaagaacatagaaagagatgcagacctcgacatttaggatagatgacaccaaaaagaaagggtagcaatatccaacgttaacatcaacaaggtacaaaaagttttggcatacaattctacttaatttgtctaacaagtcattcaaattgcataacaatatcacatgaaaatgtgacgagacagaacaagaaaaaaacctggaagaaaacagtctctgcatgcccatagagattgcggcggacagtcttggttctaggaagatttgggtcagaagctacagacCTGTGTTCGCTCCCTAGCAGTGTGGTGCACCTCGTTTGGATAGACACAATAATTGTCAGAGACCTCctgaatcaaaccaggaatagtattgttaacttgtaagcaaaataaaggatgtttgagggatggcaaaataaatgatgtttgagacatgctcttgtgctttgcaactttgggttggaagacatctgatccatcatggaaaatcttatggtggtgaagttgtggtagctttattctctgtaattctgagcggcctgtaagcgactttattacacagatgttttgctctatataaattgttctgtcatgtgtatccttatctatgttttttttcaaaatttgtagtggtttgaatcaagcagctaccaacttctattcattcgaccaagggcgcattgctgcttatatagactatatgagatgattagtcgttcaacttccagcaccaatcaagaagggacaaccttaccccaggtgcaagggaatattgaatttcgaaatgtgtactttagttacctgtctcgtcctgaaatcccaatattaagtggtttcttcctcactgtaccgacgagaaaaactgtggcacttgttggtagaaatggctcaggaaaagcagtgtaattcctctgatggagagattctatgacccaacattaggtaagagcgttgagaagcatcttttgttttccacttctatttccactcaaaagactactattatttttcaggtgaagttcttttggatggggaaaacataaaaaaattgaaagtagaatggttaagaagccaaattcgtctggtgacacaagaaccagccttattgagtttgagcatttaggaaaatattgcttatggaagatctgctacctttgatcagatagaagaggcagcaaaaacagcccatgcccatgggttcatcagttcacttgaaaagggggacgaaacccaggtaaaggaggttaccatatatcttattgtttatcaaggctagactgcttaggcattgaatctctggtactcaccttttgaaattctgtaggttggtcgagctggtctaacactcactgatgaacataaaatcaaaatttctattgctcgtgctgtgctttcgaatccatccattattttgcttgatgaggtcaccggaggacttgattttgaagctgagaaggctgtacaagaagcattagatgttctgatgttgggaaggtcaaccattataattgctagacgtctttgcctcattaaaaatgctgattatatagctgtaatggaggagggccatcttgttgaaatggggacacatgatgaacttctaaacttggatggccatactcccttcaacaagttactaaaccatgcttcaatttttgaactccaaagccaccaagccagacagacCTCCACACCTGATAGCTTGAGCCGCTTGATCTCGCTCCCTGGTAGGCCAATGAACTCCTGCTTAAGCTTCTGCTTCACCGAGTATATCACATACCCctgcatacacacaatttaattgagactccatccaaccattgcaggattataacagatggattcacaacatacacagttccaagaagtgaagtgaaccaattcatctcacCTGGCTGGGTATGGCGTGATAGGTCCTGAAAGCCCTGACCTTGAGGTCCCTCCTGAGCTCGTACTCCTCCCTGACCTCCAGGGGGACCAGGTTGTGGTTGAGCTCAGACTGGTCCAT

ggcgcggcgatgcacctcaaatagccgctccacgaggtcccagaggcacgctgggacgaagatggtgggcggacgcagcctgaagagcccccgctagccacatacatgggaaggcccccgatgtggtcgaggtgcccgtgagagacgaagaggaactcctgcgagacggcgcactgcgggcatcggccgatgtcgaaggcgaggctcagcgtcgggaagatgacgcaggtttcttgaccgccgatggagacgaggaagcgggaataggagaggagctgcaggacgcaacctccatagtgtactcgtcgcagcttttcgccattccggcgccgaggagagaggaggggggcttaagggtcgcggtgggctgtgcgggcgattcccgcgcgcgtagggagggaatcgcggcggcgggggtcgtgcacgtgatccgcgggggagggaatcgcggcggcggggggtcgtgcgcgtgatccgcggggggagggcaatcgcggggggcgtgatccgcggcagggagggggagcgggggcagtctacagtgcacccttaatagttagtagagataacacacatatgtacataagttattgtgttattatacggttccgttgcaacgcatgggcactcacctagttatatatatgaggtcagtatattgggagcctaaagcttccaatagttacaggaagcccagccaccccctggtccacacccgacaaccaggcacatgcggtcgggtgcgtcccccgccatgcaccaggtcaaacctccccacgcgtgtaagtcaaaccccggtccaacacccaacctccgcgtgggacgcacaacataaattgtagttctgttttttgcgcaaatagagtaaatagttcacagaaataacgtaaatattttgtagagatagcataaaaactccgcccaactactggaccaacaccacatgtgcagacacatgcatgcagatcctatttttatgatagatccaataattatggcagatcatggaagtttctattgcatgcgtgtaaattttggatgacattttcgtttccactgcatacgcgcaaaaattggattgatccataaatataggatcgctccaacagccatacagctaggcatgttagaacccaatttatgatatatactaatattaattattctacacagtgtagatattttatgtattcaatata

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ctacgtaaaaaattgttttctgttgcatgcgcacaaaatttaggatgacaggaatttgcgatgaaagaaaatggattgacatgcatgggaaaacaaaaaaatcttattcaaatgttttatttcctccataaatatatgatcgctccaacacccatgcaggtagactcgttagaaccagtttatgatatatattgatactaattatgttacacggtgtagatacttatgcaatacgtacactacataaatatatggcatgtggtttactggtggacacatcttcatattcgagcgtaaaaaccagcagttatgagcgtaaatactgttccaacatgaaagctattgaaaacctcttgatgttggcatagatatgtatacaaagtgacataaaaatatgtacgcgattgtatgtcatcactccaccgcgaacatgcattcaggcgcgtcccccaacagacgcatgcatgcaatcctatttttatggtagatctggaaaatatggcaaccactaggcacatgcatgaggttcctaatttcatgcagatccaaaaattatgacaggtcgtgagagtatccattgcatgcgcacaattttgaacgacattttcgttcctacagcatacacacaaaaactggatggctggtatcacacaaagcataaatcattatagaaaattgcataaatatatacaacgtacatcataatcataattaataaagaaggctcaaccaacagccgcatgcataaacaaaggattgcaggtcatcaccggaggacgtcaccgaggccaccagatcggaagagttcgtaaacgaaggatgcccaaaccgtcgtgtagaccgccaaccctcgcagctcgcgtctcgcgtcaccgatgtcgccgctggagccacccgtgcctagcgtggcaaccatcgctagagacggacgcgcctcatggggtgccaccgttgctcggtcgtcagggtcaccaccgctcgcccgcctcgggccccatcatcgattgccctacgtattagggagctgccggcaccacgcctccgatttgggaaccaccgccgccgcacctccaaatcgggtgtaacaccccaaaattttattttgggcacttttcaagataatacaaacatcttgaaacaaaatatctttaataggattttcctcactttgtaagccacgtctcctgaaataaatataactcatagtaaaggatcaaatgaacagatcttatataagttaaattattcttttaaataatatatttagagatattctccaaataggttaagttaaaacatctcttactgaaaattttacactatgaatctttattcataaaataattatttccttgtgaggagctacatatctaaaagccctttcttagataggataataaattaattaattaatcaaatgatatatgcatctcatgctaggtcttattttgtggtgcatctcgaatttgaactctgaatccaaattaaaattttgaatttgagttagtacataaaatagaaaatgaaagaaaggaaaatagaaaatgaaattagaaaagaggaaacccacatatgggccggttttctcacttctcggcccacctctcccgcacggcccgcttcccttgtccacgctgcgatgaaagaagtgggaggagaagtatcagacttgccctaggaaaaaagttgggggcactcagacaaagacaccgaccttgcttcatgacccacacaacgtgacattccaacaaccagcgatttgtcgaccaacccgtctgcgaggtctattcaaaaaggagaccgaagagaaagggggctaagagtgatcgacaagtgaacgaccatccggtgcttctaaaggagggcgaaggtgctcgactcttccccaagaagctacatgttgcatcaaaggtagccttcatcgccttatgtgaagggtatctaggcgctaagcccaacctcactttatggcaatacttcttttgtgtcgagctgttgaggaagaagaaggagcgaggaataatggaatcatggtcgatcaggtgcgccagtatccgccttcacagcggaaggtcacgtgagtatatcccaacccccttttccttatataacaagggttggcacatgtgatggttctacctgcgagacatcgatcgagagccctcgttggggttaccgcttcttagcatcgatcggaatgtcccgttcgaggctccctaaactagagccacgatgtcacgcctgaagagaaagttcgaatccagggacatctagcgtgggtgcatatcctctaagagaaaggcgtcacaagagcggacattatctataaaacctctggtgttacgagaactaaaactttagcatgacatcatatgcactgcattatattatgaatgacttacccaaaatgcattcactaggctaaaatttcaaaacaaaaacatgtgatgtgatgcttggttgagtatacggtctagcaaggggattcttaaccctatgtaggaatgaatctcttcaagggctagaagcatgtgaccttatgatttgagcacaaaggagtgatcttaccaagcttggtagccatgtttaagaaataatgaattggagaggttaaacacttaatgtagcttaggatactcaaaactctaatttggagccccaaaaccctaattagtgccctatagggtgatttcaaattctatgcactttttgccaaaagtgtatatatcaaagtggtagagtaacaaaaaccaagaaacttttatatttggaggtttccaagttttgtggtgaaacttggagtaatttgtaaaagttcataagcacctctagtcttgaactctgaaaatagtgttgatgagccaactttgggctcttgtatcacttaatctataagggattttttggaagtcattatggcgaagttgtagagctactatagtagtccaaattttattaagtgacttagcccaaaacctatatgaaatttggagaaaaatgcccttgaagtcgggctgtcagtcgaagggaagtctgaacctagactgacagtggcatgagcctaactttggagccattttatgcttgatccattgagcaaatgaccaagatccttatgacaaagttgaagctgatatataggagaacaactttgatgcagtggggttggtagttcactgcataaaaatcgaagaaaaaggtccctaaagtcgctttgtcaggcgccctgaattgggtgtggcatggaacaataattgaatcatatcccaggttcactgaacccgtcgtcggcgtcctcacgtcgtgatccgagcttggcttgaagattcgtgtgaaggaacaaatatccgtggtgaaaagatcatcgggcagggtttggattggctcacgggcggaatcattcgtcgtacccacttgcacggcgacgtggccgagcagccatcgtcgtggtggttgcagtctcccgctgttacgccatgccgaggtccattttaccacgtcatcgtggtcgtggcgagtagggaattattgccctgaaccgttacaccgtcttgagccaccatgaccaagttccatgaaagctcttgatgccgtcgctggcatactcattcaaaattcacgacatgtgatgctggttcctttaaattgaatgcttccctcgctccaccctcttgttacgaacccagcgcaccacccctcactcccgatcatcaaccatagcttgagaatttcgtatttccctggaatc

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ggttggaacaccatcgtgaaacacctcgccgtggccagcccttttcaggttagttcatgtccctctagtccccattttagtacctctctgacctctagatgattacggtttcgaccaattgaactctaccgcgttatagccctgggaacgtcgtgttgtcgctcgggaatgctgtcgtggacacccctcacgtcgatcggctcttccgggtcttctccgtccaaattcacatgatcaccatagttctagtgagtcactgatcccttccgggtcgtttgattgaactctaccggcttgtgtagtccaaattcgccggagctcggattctgctattgtcatgggcacacatgaattagggttggattattcaaattaacttaagagaagtgctcaggtagcctctgggacg

>gene3Best maize hits:

NM_001148386.1Zea mays uncharacterized LOC100274000 (LOC100274000), mRNA >gb|BT042177.1| Zea mays full-length cDNA clone ZM_BFb0153F14 mRNA, complete cds

EU966203.1 Zea mays clone 292556 single myb histone 1 mRNA, complete cds

AY271659.1 Zea mays single myb histone 1 (Smh1) mRNA, complete cds

Best non-maize hits:XM_002455819.1 Sorghum bicolor hypothetical protein, mRNA

XM_003569238.1 PREDICTED: Brachypodium distachyon uncharacterized LOC100830626 (LOC100830626), mRNA

AK365152.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031H21

CT830863.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110E03, full insert sequence

JF951953.1 Aegilops tauschii clone TaMYB70 MYB-related protein mRNA, complete cdsAK334835.1 Triticum aestivum cDNA, clone: WT011_D14, cultivar: Chinese Spring

NM_001049977.1 Oryza sativa Japonica Group Os01g0589300 (Os01g0589300) mRNA, complete cds

AJ495788.1 Oryza sativa Japonica Group partial mRNA for MYB19 protein

ATGTCCGTGTACTTTCTCCTGCTAGGGAGGGTCACCGGCGACGAGAATGCACGGCTCTGGCCAggtgcttgaccggcacatggtcggggacccggagttgtaaagaccagagaaggggaaggcttatgtgaagttgtcagtgacacattggaacagtgccacagactctttattggttgtttaaaacatctaggatctttgcgcaaaatcgtcagcgctggcgcaggcacaagcgtgtttccctgttcgtggaccggtttgggctagattcagcccaatcctgttcattattttctcttttccttttcctggtaacttgtgaaatacataaaaaatagtagaaaaatgattaaaacatggaccaattttactagactccaagaaatatgtagtatttaataaaaatacttctaagatttttaattcaaattataaaatgtatagcgtaaggtacttgagcatagcttcttagaattttagaaatattttaataatcccaaaaatcctaaaactttttgggtagacttaaaatgtttgttttgaaccttgagtaaagtttgaacttatttgaacactgtttgactaggaaaccaataataagcccaaagaattaaaccctttaatacctagggagtctaggagtagttttgtaagtagaacatgaaaatcatcactttgctataatttggtagcccaagaagattagttgaactaatcctaaaatattatctagctaaaagtcttggtagttaataggcttcatgaaggaaaattgtattcaagacacaacttactatcttcttgttataaatttgcatatccatgacacaacatatcgtaggatgtgaataaggccaacatatcatcatatgaggggtttggtcccacatggatcacgatctatcatattattttgtcAGCCTCGGGAGGCAGGGCCGACCTGTGCCTCTCGCGCATGGAGAGGCTGAGTCCACGCAGAGCCTCCGAGACCGCGTCGGGGCTCTCGAGCGGAGGAGGccaggtaggcccaccctgaccgcatcgccctcccggttgatgatgaaatcgagcttcccgaagcggatgccactctagggtgtagtcaacgcggggaccgccactggccctcatggtcgcgccaaggttcctcggcggtggaggctctcgaaatgaatcacggcttcggggatgcgattggtgtcacgcctggccatccagagcttgaagagctttggcacggaaagcgcaagtcccctacctggcgtgccaactgtcggtctttcaaacctcgctccgaaaagtaaatttattgtgcgcattccatgctctggacggtttgcgaggtgtgcacaagatttatactagtttgggcagcacctccctacatatagtcatcggcggcttgcgctatcgacaccattgatgatcaaagctcgtagtatgggttacaagcaaggcgagagagggaggagaggctcccaagtctcttgttcggggtggaggtggttacaaggtggagtcctagctaggtcttggcttggcagcagggcttcgatctccaggtcctc

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ctctaattcgtcggtcttctgggcgtcgtcttctctagggtccgtccttgcatcgtccacccgagagaaagaaccctcaagtgctctctctagaagggtgtcctccatgcgctcctctagaacagggtccccctttgcgcttgggggccgacctcctccctttataagctaaggagcggggggtcggcccgtggtggattcctttggaaggatccaccgggtgatggtaaaaccagggttcttaccatggggtaaagccacacatgcttgcaatcgcttggctatcctgtattctttatacgaacgtcgctggtggcatgggcctgagcgctatcatttgggctatgccgaccctcgaccttcgtagcctggggctcggcgcggctcatcgtgttgcgccctgccagcgggcctgcgcacttaggcctagtcccgataggtcattagtgcaccgtcgtccagggacgtgcgggccataaatgcaccacagtccgagggcttgtagatcatgagtgctctgcaccccgagggtttgtaggccatgagtggtaggtagggtccgaggggcttgtagttaatgtgaccgatcatttatgatgggttggtctaGGGCCAGGCGCAGGATCCACTCGAGTGGTTTCCCTTCGACGCGACCGCCCCCCTGTCCGGTTCCGCCAAACCCGACCTCGGGCTCGATGCCACaaggttcgtttgggggcggattcttccagagtagacgttatttgtctctttcgactgaccagtgggcccctgttgccagaggccctttcccagtgtgctcgctggccgatgggccccaggatctggggatcatatccccgacagagcgctgcgatgtttaaggtgtacagttgcggctatcgtaggggaggggtcacccgtggatagtctatggcggcacaaccacactcagcggccaacctagggatggcaacatggaattcctcgttggggaataacttccatacctgtcctggtgttgaatttttttccacggggatccccacgaatgcttgcggggtacatttcttcccctgcagggataaatcgccgacgaggatctcgtccctacttaaactacaattaggacgtacatcctttattattaatgcaaaacattgtcatttatgcgcattgttatatgtacatcaatatgaacacatttatacaataagtaatctaacaaaataattatttatttttattattatacggaatatcgtcatgtgcaaatttaacaaattcccgtttggaagaagatagacatcgcttcaccatttcccgtcccatttatgtgctatgtgagaaaatattttttcctgtaaaatggagaatcgggatagaatcccattgcctggttgccatctctagggcaaccctctttgattttatttatttttatgttgattttatttatttttatgtttgatgacgacgacgaagaatcaaagagggcttccttcgaacgccacccccgggcctgtggcaattaatcccctcgccttcgtaaccgccagtcctccgccacctctccacccaacaacaaaacaagcctaatgggtaatggcttcctcagttcctctccatctcacgccactgcgctgccctagaaccttcgccgccgcccctctttAGGATTACCGTGTCCTCGATCGCCCCCTGGCACGCCCGCCCCGATCGCCCCCTGGCACGCCCGCCCCGGATCCTGCACCGGAATTCCGTGTGGAATTCCGGACCCGATCGAAATCGAACCGCCTCCCTGCGTGCTCCCCTGATCAAGAAATTCTCACGCCGCGCGAACGCACGCCTGAGGCGGTTGGATCCTCTGGTGGGGTTCCTTGGTCTCGATTTGCTGTGGATGGGGGCGCCGAAGCAGCGCTGGACGCCGGAGGAAGAGGCCGCTCTCAAGGCCGGCGTCGCCAAGCACGGGCCCGGCAAGTGGCGCACCATCCTCCGGGACTCGGACTTCAGCGCGCTCCTGCGCCTCCGCTCCAATGTTGACCTCaaggtgacgctcggatcgccagggagggtgggcggtgggtttttggcgatcagctgaggggagtatggaggaaatctccagtccttttagtcggttagactgaatgaaagaaaatcgcggttttgcacgctccgtacatcctgacgtgttccttatttggttctagatcggtattttaggtggtcggtactcggtagtaggtattgcatagagttttgaggtggctcgagagtaatctggtatatcagaaacttctagccgtagcatcatgatgcccaaaaagcttccacacccctttgttttattccatgtagattttttcacctgctaggtattgatggttccttgagagagaggtcacttccatgtgttgatcttgttcaccataactatgatttgtttagttgggcataatatgtttttagtttccaagttcattttgaatgcctgtatcgatgagtacaaatgaatcttcggtatggtctatttgtgcAGGACAAGTGGCGCAACTTGAGTGTCACCGCAGGAGGTTATGGGTCTAGAGAGAAGGCAAGGATGGCGTTGAAGAAAGGTAGACGTGTGGTGCCTAAGCTTACTGCTGAGCCAATGGATGTAGATGTGAAGGATATGGACGATGCTCATGACACAGCCATTGATGTGGAACCGTTAGCAATGGCTTTCGAGTCCTTGCCAACTGAGGAAAGTCCAGATAAGTCAGTTGctaggtcagtagactcggtgcaaatattttatcaaaactacttattgtctttatgagtaacctaccttttcagttcgtcatcttcctttttggtgaaatgtgttttatgtgggactagatagaaatcatcgatataatttgatttgacattctgattctagtcctgccttgctagacattaaagttcagaagttgaccttaaggaaattccttttaaaccatatctgaagttctgaactgtctcggcaacaactagtgcaggaatttgtttcgacttattgtctttatgagcaacctaccttttcagttcgccatcttcccttttggtgaatgtggtttatgtgggactagaatgaaatcatcaatatagatcgatttggcattctagtcctgcctggctagacattaataagttgtttggtttgaggaatgagttagttcatcatcttctcactcctcacttttttgtttgttttgtggaatggattgagttgatccatcatcacctcattccttatagttatttagttagtactaatatgaggaatgaggtcatcccaccaaattttaggaatagacccataatgcaccaccatattttggatggagtgattcctcaaaccaaacaccccctaaagttcagaagttgaccttaacagaaattcctttgaaaacatattaaggtatgtgaactgtctcgacaactagtgtaggaatttgtttacagttgtgttttgagttggggttcgtga

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tttttgtttacactaacagttgcagcttacaagcacattaaaggagcatataaacagtgatcttgtagaaaatcaaatgcttgcctattctctgccatattataggcattcatacatttcctttggtgctcagtttgacctctcttatcacgtctttagtcattaaagtttatgtcatttttaggaaatgaaatataaattattaccccctttcttttacgttagaaggcttgttttattcaatgatggttaaatataaaaggcacacatagttcccaatgctttcctatatatctaaaggctagttaacttcatgcacaaagcgttgaattgtttttttctcccaactcaatttgtttgtaccaaagcaacagagtagtaatagctacggtgagcatttatgcatgcaaccagtgtgaatgactctttgttgtgttcatgtatgtacacagtagtaatgtgtagttacttgggtcactttagtcagattagcaagtttttttttgtctttgttcccaaataaacgtgctcgctaaaactgaatggagggaccttgtctctgagttgatggtaactgtgcatcggaaatgaagttatatggtcatcgtaattgaaacaggaggctatgcacatgttaaactcttatggctagtgcgacaatggtgagctatgtgcagagtcattaaaagagaacatattaataaatgttgacctgactgatactcttactaTAGAAGCTGGACAAGCTCTATGTTTAAGCCAGTCACAAAAAATCTTATTGGAGCAGGgagggtcatcagtgtctaaaaacatgagttgaaggtggttgtatggaacgatggaacccaatcaatctgggttgataatttgatttggggtcgatgacatgcacaaatagttacaaaaggtcaatacaaataatacaaatccaacacgctaaccacctaataattgtgtggtgtgatagtcatgctcgatcatgcagccttcgtcctttcttgttcctcgctttctctctactcaggcaacctgatgccgctagtcacgaatcaaccactgctagccaacatctcacactaggcagtagtgaaattgattgcctgcaatgttctcttctcttttgtgctcctagtttcattggcgaagtcatgtccacaattgttggtagccatgatcaactctagttgtctctcatgtcacaaattcacaataacataaactcacatcatcttcgtgtcctctcctctccctgtacctcattatagccctttggatctgtggtgtactgtcgcaGTGGAGTGGTGATCCAGACAGAATCGAGTTGTTGACCTTTGATAGGTTTTGCCGTTTTGGAATCCTACCGCGACTatgtaagttttatgtatggaagatcgatggctagagcgtgtaccccgatgctgtggtcgcgcataaggagtaggcgagcgagaaagagacgtggtagatggcccttgaggccaagcaagataattgtcttgcttacttagattgatacatctctcattatatagagatgcttactttagccctaagtaagctattcttatttttatggaaacctcctagtcaagaatcaatcatgaccctattcaagaatcaatcatgatcctaatcaagaatcaattatgatcttatttatggaaacaaatgtgaaatatctaaaggaaattattttgtattttgtttctaattgtccttatggtgaccccaacatctataggtgacaccagttataagatatctcctcgcctctctgaacaactcgctcgagctagatatcggggtagaggtccttgaattgctgaagcagctcctaagtggtgtcagtcgccgccacaccattgaatgacatgccaagtgccctggcgtagttgggcgcaacacatggtctgctttaggcagtagtcgaccatcctgtatgggtggcacagGCGAAGGAGTCACCTGGGGTCCCACAGAACAACTTGAGCTAAGAAGCCATGTTCTTGGAATGGGAACACAGAATACAAAACATTATTTTTTAGAACcatggtatgaagggggtacaccttgttgtattgttttttcgacaagtgaaacgagaaccatgacagtctggaacaatatactagaacgaggaacatgttcccgagaattttgggttgacgcaactggcaacgaaactaaaataacaagttcaaatcttacaaataatgccatgccatatacatgacctttagatttcagtctaccaaatctcgaccatccatccaaaatttggaaccctagtcgcgggccatcttttatttgcacaacaacacaagctgccagcgtctgtctacatcactccattggtctgtgtccatacgcctttgtactctagcagccgccgagcgcccgagttgtggcagctgcaagctgccattcgcaccaagccaccaactaaccagctcccgagtcaccagtccccacctgcggcagctattgcccattgatacgaggtggtgacaccgacgtccggttagggatacacgacgatgtccaatgccggtggctttgcgtccattgttcgctctgtcactgactaccaaccgtgctactatggacacaagcatgctagtcggagcgtggagcgtgtgcccagcatgggatggcgtcccacgtcctaagagtcataggtgtgatgccctaatctaatcccaagtaactaactcaatcttctaatataatatttatccactaatcctaaccctgagcctatctctatgggcctccatgccctaggttgccgccccatgacatttagagcctacaaaaatgttttaagtgcctcaaataaatagttttttatttttggaaaaaagaaaaatactcggaaaaatacgaaaaattatcggagacttctacggggtatgttaacatgtttcaaacaccttttgtacttaaaaacattatacagcggtatgaatgcaacacactaccacaccaagttcacacttatgatctgttttagttgataaaaaatataaaaccataatgcgtgattctagaccactcaaatcttatcaagttaaaccaaattttcaaaaaaaaatgttgattaaaaaattagggtgttacaacagatctggttaagtacatggaacgagggcccaaagagggtgtgcagctctgtgaagtcctcggtggtgtcggtgttgcagcatgagggctttcatcaccgagttgaggcgaccggggcggtactctactgcgaaatcgaagccagacaacttgctgatcaactagtgttggggaatagttgagtcgctggtccaagaggaacttgagggcttgaggctgtagtggtcggtgcaggcgaggaagcagcgactctagaggtatggccgccaatgctgcacagcctgaaccagaccaatgagttcacactcatatgcagctagcttgtgatgaagagcggtgaagggtcagctgaagatggctaggggaccagcccttggtggagaacggtgccgaaacttgcttgcgaagcgtcatagtctacgacaaattgtcagtcaaagtttgacgtttcattcctaattgtctgcatggtgaccctaatgtcttagatgacaccagtcataacaatcttgcttgacccaacccttgatttgggatgatgtcctgg

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ggatgcagaacgtgcccgaccctaacccctgtgattatgtgtaacaaggattaagcaacaaacatatatatcttgctatttgtagtatgcaacacatgtcagttgattacgttcagtaaagccaacttcgggacattattggatgtatccacatgtattattcatcttctgatactgcataacagttttaacatttttgcctcctttatggtctgtgctctattgagatgttcgggtagtgtctttatttgttcctatggtgtctgcagtacatctcgactctgtaccacagttttcaagtaaacaaaaaaggaaactgtttgttgtgaattggaatataatgttgacacatacatcctctgagttccaatgtgtgccctttctaatgttcaatttcttacagaggttgccttattatttagtttatttaactatgttagcatatctcttcagcggttgccttattatttagtttatttaactatgttagcatatcctcttgatgcttggtcatccatgtgactttatgtatgtctgatttttccaGGCTCGATGATCTCATATTAGAAGCTATAAGGAAGCTTAAGGAGCCTTCTGGGCCCAGTAAGGCAGCCATTGCTGCATACATTGaggtttgtggatatcaatttatggtctgctcacttgttgtattttgtttaacttaagtcagctgccctgctatttcttttctggtcactgctgcctgtaatgggaatatttgtctcatccttttgtatgaagaatctctgctgattttttgctaacttgagacaatgctatagtgatttttcttttgccgatggatttaacttaaattgtctatatatttAGGACCAATACTGGCCACCTGCTGATTTTCAGCGCCTGCTATCTACAAAACTGAAGGCATTGGTTAATTCCGGAAAATTAATCAaggtctctccctccctccttccctgggttgtctttttaggaataatagtggggacagacttcaagctgcatactatttgaatcatgattgtAGGTAAACCAAAAGTACAGAATTGCACCAAGTCCACCCCCCTCGGGCAGAATAGGCACTAAGGTATCCTCTGCTGAAGGGATGAAGGCAGAAAATAATAATGCTAAACGTCTAACTAAGCATCAAGTGATTGCTGAGCTGGAGAAGATGAAAGGCATGACCAAGGAAGAGGCAGCTGCCTTTGCTGCCAAGGCAGTTGCTGAGGCAGAAGTAGCAATAGCAGAAGCTGAGGAAGCAGCAAGAGTTGCAGAGGCTGCAGAAAATGATGCTGAAGCTGCAAAGGCTTTTCTTGATGCTGTCACTTTATCAATGAGAAACAGGAATGCTGCTTCCAtggtatagtgaacccagcctttgttagtatataactggtacataaactctttgactgataacaccttttgatgaatgcagATGCTTCGAGCTTGCTGA

tcctttacccatgcggtcatatggttttggccagcagcacaccggtgtttctgctgcaaagattttctggatatatgagtttcttgtatagccttatttatagatcacgacgcatcaactggaggggttttcaacatcttgctgttggtcctttgtcgttgcagcctttagacaatcgacaatatgataacaagaattatcgtgaaagtagtcttcatttatttttgttttcttcccattgtgttgctttgtaattaaactctagccttttcgtttagttagttgaaatggtgtcgtctagtagaactgtagtgaaaagaaaatgaagaaaatgttagatagccaccttagttattcaatttgctgtgatagtatgtttctagatatgattagctaatgacagcgtttaagattacattcctgctgtttcgtttttttctatagagattacctcttttaagaaaagcatgtaagatttacaaattcggctcgggacaccaacaaaagtacaaaaaagttcagcacaaatgatgtctcgtttctcatagctatggacatgtttgggatagcttttttctaaaggggttctatgaaaatttaaatttctaaataatctagctgtcacaagaatatgagaaaggggcttacatgtggaggaagataaacatagcgatagtttttctcacatagtgacaacttggagtttgcattcaaattgaattgtcaattttcatagaaaagtgctaagaagtgaagtgtttggttgtctgaaaccgatttcgatggccagaattcatccagaagtcgaaacaaaggggcttgtgtattcttatgtaacttttgtttggtttttggctaattttgctataacttctgtgaagttaatcgatcaaattgaacaactaatcttagacagaaaaagttaaataaattatgaactaaataggtctttaggctgactccaacagaaggcgtcatatcctatgcaataatagatttagcaaaactaaaatatgtataaatatttagaagtatagtaaatatgtatagttttatcatgcacatgtttagttctctgccattgtgaaggtgaggctgccaggcctactgccatatatgttttgattgtaaataaagttaggcacaatatatcttttttagagcagcacaacttgccacatgtgtggtggcctattttttttggcatcactaaggctatccctagcagtactcggatgcgaatgtgcaaaatatgcgtgcaatggtgaatatgagcgtgaaaaagtcgcttctagtagagcgcgtaggggatacaatccgacaagagagatgcaatatatgccctcctcaaggggtcaagcactcgatcagaactaaaccatcccgcgacactcacaacatgagcacacagggcaagataaagatgaggataaaccctaaagagatcgtcaacttcaccttggcatgcttccattagtgcctcaaaacatttgctattcttatctcttgaagggtcctattgttgtagtgtttctagtgaaagaagtcccacgctagcagcctgccagaaccattaatacatggtttgatccactgaacacttgttttatctatgaagagctgagttggcaccacgaggtgtcgactcagctatttgccgagaaataagcagatcctgccttctacccattatgtcgatgattaggtagagctcttacgtgggctaggttactaggatacgaccgttccgcaatagaacatggcactaatgtatcccctaaggtcccaacacctttttgatcattaccgaaatcataacatttctatatgataatttgagattgctataccagacctgactaccaagattgaagtctccatgctcgtcatttctagtgcttgcacaacctcctggtgccttatttactgacaattcccgggtgtaagccaacacttgcaaatgtcttttatttcattaaaaactac

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gctttgtcgacatcgtcttttccaaacattcgggaccttagttgcaagtatgagaaatgttggttttggttaataaaaatgaaacattcatgaacaaataagccattacttaattcaagctccaccctgaaagtgtcaatataaaagcgaacaactagaagctcccacatcagaagctagaattgacgccacagcataaggcatcgcctccatgctatctgcacatggccccgaagtggaatggctaatttgcacaatctaggaagctcagccttctccctctcagttcctccgcaatcgacttaccagaatcgttgcggcaactccaattcaacccccactctttcccggtgtctatacttagtgaaagtcgtctagaggggggtggataggcggaaactgaaatttataaacttaaagcacaactacaagccgttgttagcgttagaaataaaaccgagtccgaaagagagggcaaaaacaaatcaactaagaaataaagcgagtgacacggtgttttatcgaggtttcgggttcttgcaaacctagtccccgttgaggtggtcacaaagaccgggcctctttcaaccctttccctctctcaaacggtccgtcggaccgagtgagctttcacttctcaaaacaaccgggagcaaaacctccccgcaaggaccaccacataattggtgtatcttgccttggttacaagtgagtattgatcacaagaaagaatgacatagataaagccatccgagcccaagagctcaaatgaactcgagtatcactctcactctcactagggttatgtgaggaaatggagaggatatgatatcttaggttgtcaaaaattggatgttatagttcttgtagtaattgggaatggatctatttgaatgctatgactggagggatggttggggtatttttatccccaaccaccaaatgcgtcgttggcagctattgttcgatggacaccgggtgtcagccgacaaccggcgcccccagcgcgacactannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactaaaaataataaaaaaatcagaaaaataaaaaatttataaaaaaaaaaaaataagaaaataggaagttaaagaagttaatggatacctatggaatacaaaccctacctttggtttggtttaagtagtggatgtggggcacttccttccgccgcgccatcgcttgaacaacagttcaattcggcgatgacgcggatctcgctcttcagcacgataaagacacggaaaagatttttgaaatgtcctccctccaaaccgcgcgcaacccgtgccgccgaatgcagtgtgttcatgtagaatgcaattcttccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccaccaattcaaccgttggggaggatgtatgtcgacgagcgcaccagacagtccggtgtgccagccacgtcacccaaccg

>gene4 (reverse)Best maize hits:AY664415.1 Zea mays cultivar B73 locus 9009, complete sequenceAY664419.1 Zea mays cultivar Mo17 locus 9009, complete sequenceBest non maize hits:AC243120.1 Gossypium raimondii clone GR__Ba0131I15-hog, complete sequenceDQ645537.1 Zea luxurians mitochondrion, complete genomeDQ645538.1 Zea perennis mitochondrion, complete genome

TTAGGGTTCTGACGGTTTTGACCGTTGGAGCTCTGACATCTTGGGGCACCGGACAGTTCGGTGCCGCACCGGACATGCACTGTTCACTGTCCAGTGCGCCTTCTGGCGCTGCTCTGATTCTGCGCGAACTGTCCGCGCACTGTAGCGCTTTTGCAGGTGTCCGTTGGAGTGGACCATTGCGCTGGAGCCGTTGCTCCACTGGCACACCGGACAGTCCGGTGAATTATAGCGGAGCGGCTCTCTAGAAACCAGAAGGTGGCAAGTTTGAAGGAGTGCGGCCTTGGGCACCGGACACTGTCCGGTGGTGCACCGGACAGCCCGGTGCGCCAGACCAGGGTTCTCTTCGGTTTCTTTTGCTCCTTTCTTTTGAACCCTAACTTGGATCTTTTTATTGGTTTGTGTTGAACCTTTGGCacctgagaattcatagtctagagcaaactagtcaatccaattatttgtgttgggcatttcaaccaccaaaatcatttaggaaaaggtttgaccctatttccctttcacttagctctttaaaaagtcttccagtacctccctcgtggcagcccgttagaagcatgcctcataagaatctttgtggcgacaatcgaagtatcctcactcaattttgaaacaaaccaccttccagtttcgtactgctactacctcctaggtcgtcgttctttccattgcttcgggttctttcctatgcttcggagctaccaaactcatagatttgcgatacagggacagttgaccgcacgctgcacaagaaagcctaaagtgcggcgatgtcataatgtgctcacatcagaagctagaattgatgccacgacataaggcatcgcctccatgctatctgcacatggccccgaagtggaatggctaatttgcacaatctgggaagctcggccttctccctctcagttcctccgtaatcgacttaccaaaaatcgtcgtggcaactccaattc

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aacccccactctttcccggtgtccatacttagctctttgaaaagtcttccagtacctcccgcgtggcagcccgtcagaagcatgcctcataagaatctgtgtggtgacgatcgaaggctcctcactcaactttgaaacaaaccaccttctggtttcgtactgctactaccTCCTAGGTCGTCGTTCTTTCCATTGTTTCGGGTTCCTTCCTCTGCTTCGGAGCTGCCAAAGTCCTTCGTATTTACATACACATATTTGCTCTCTGGACCCATCTCCTGGTTCATATTTTCGATTATCCTCTTCAATTTCTTGTTGAAAGCTTCAGTGACGCCATTTTTATATGAAAGACCTTTTTTTATTTGTCTATTCCACTCCAT

ttaaatctaataaaggagccaatacaatgaaattccactagtatagaaaaagaggaatagatgcggatgcacatatacatcaatgggagagagaaaaacacatagatttgcgatatagggacagtcgaccgcacactgcccaagaaagcctaaagtgtggcgacgtcataatgcgcttggtaagtttcggccgggacaaaatatatcctaaatttgattcgtttaagacgtgtatggctaaacttttataagtttgatcgttagtatattaataactaagataaggttatattaaaaatcatgtttatatttgtttcaaatgaaatttacaataacacaaccttattgggttctatggcgtgcatatttttacggtgatataaatatttaaaaagtattactcgtttgaagtgtcttttctataatagtattaataggttagacttctctataatagtacttagaagtgagtgacttctctaaaaccgtatttcactcttatttttgcctatttctattttcttttcataatttctatcgcttaaaaagatattttacctagatttcaactccttttaaccgaaccctttcaaccccatcactacattcagcttaggttaggatggacattaaaagtgtttatattaaatttgttttacagattccaattaaaaacacaaaaacatttttgttaaaattttaaaattgaaatagctaaaatttgtaaaaaaaaaacaggacaactattagagacctgtacacaaaaatatgggtttctctacgagcaatagaatccatatccgatagaatataaaagttacgggttgaggaactgcaaccataactcattgagctgttgcaggggtaaccatcctccgtttatatgtataggacctgttgtgcaatttttatttttatttttaaatttttaacaaaatgttacatgttttcaattagaatttgtaaaataaacataacataaacacttttaacatccatcctaacttgagctgaatgaagagttggaatctaatcactacaggaaaatggttaaaaaacgtgggtgaaaaatcgtcgaacttaatgtaataggccgtcgaacttaccataagaacgtgggtttaccgacgaatatagccgacggtgatttttggatgaacttagagaagtaagttcgacagccccgacgaacttaacattaagaacgtgggtaccgtcgaacttaatattaagaacgtggataccgtcgaactagtatgagcaataaaggtaaaaagatatccttttaaacgatagaaaataagaaaagaagatagaaatagttgaaataaggatgaaattctgttttagagaagctcacttgtaagtattattttagataaacctaatctattaatactattatagagaagccaatccaaactagaactataatagcaaataactctataaaaacacacacatataaaataattgtattattattattatttgcccatcttcttctaactaagtctataaatacgaaaactgtctctgttgaactttctatacaaccatcgtattattttatatcaggggcatactaggcccgtacagattctacgactgcataggccccccaaaatcataaggccccaaaatctacagcaatatatatgcaacaaataaaaaatgttttgcataaaatattggtcaacgtgactaagaatcacaagaacgttgaaatcaatctattcctctcatttttgatcaagttatttcttcccttataagaagatttaatttaaacagtatcacgattataaaaaatatttccttatttatctctaatgcattgcaatcattagataaaaagatcttaaaatattgttgtcacaatcttaaggttgcacgtaaaagagacgaacaatctgatttgatgcaagtgacatatttgatgagttgtttcctctaagattttattccacaagaaagtatgtgccctattgacattctaaatttttttgaagcaacataattatttttctaatgcaactgatgcaccgaacaaagtttttctaaactaaagttattattgaagtcccatttttattctataactaggtgagtgcccgtgcgttgcaacgaaaacatataataacacaaaaattatgtataaatgtgtgttatattgatacgagaaaagatagtgaagataagctagcagaaatttgcatccaatgttattgagaagtgtcttacttttggttctcatgagcaacgataaattctgatcaatgaaatgcttggtagttggcacaactgatgagaacgaacaattacatgtttgttttcaacaatgattctcagctcacctttttcttttaaaatcagtagttggcacaaccactctatagcacaactcaaagcacagaagcagacgcctaagaaacacaacacccgccggtaccagcgcagtgtgttgccgaccggtgacacaatgacacaagacattatggtgtcggctaccacctccttggacatcttcaggaacgggtccatgttgtggtggtaccagccattttgcctcactcctatggatgttactctccagggcaggtgagttcatctttaac

>gene5 (reverse)Best maize hits:AY103582.1 Zea mays PCO147975 mRNA sequenceBT053879.1 Zea mays full-length cDNA clone ZM_BFc0001N20 mRNA, complete cdsBT043117.1 Zea mays full-length cDNA clone ZM_BFc0100C04 mRNA, complete cdsEU960258.1 Zea mays clone 222946 SNF4 mRNA, complete cds

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Best non-maize hits:

XM_003579593.1 PREDICTED: Brachypodium distachyon sucrose nonfermenting 4-like protein-like (LOC100844830), mRNA

AK367711.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2060P11

NM_001059222.2 Oryza sativa Japonica Group Os04g0401300 (Os04g0401300) mRNA, partial cdsAJ575236.1 Oryza sativa Japonica Group partial mRNA for NF protein

TCACAGCTTGCTGCTCATCGTCGGACCAGTAGCCATCACGTCGCGCATGGCTAGGCCCTCATACTCCTCATCTGACTTGGTCGAGTGTTCGTCCATAGAGCCGACATCGATCTGCAAGTACCCTGTGACGCGGAAGAACATTAGCTTTGCAGTGTTAAGAGGtgctgagaagataaggaaaacaaaaaaccaaattgttgaacactgacataaatcgcccatacctcgtgcatgtgcagcatgtctcttttttcatcggaggtcttcatcagtttcagcatcacgaagatcgtcaacttaaaatatatatatagatatatgaaggcaccagagtccacctgccatgagaaccagacttgaagaggctaaatttaaagatgcacgagttaaaggcaagaagagtactgatatcattggtgaagtggttacactacctatgcttgccaaccaactttcctatcaagctagtgtgttgccttctgcagtatcacatacagttttcagcataagagttggttcaaatgacttgtttaaaacgtgcactgcaggccttttttgggcaaaatgtttccctcaaaataaatgcacaaatataaaagcagtgacaatccgggaggaaacacagcttattcactagccctgctttggcgacagagatctggtggggtaagtttgttgcccttgcttcaaacaggaagcatgccgagttgagcttctttcttggccctgagatcaatgttgcctgtctgtacaaactacagagtggttaaaaacatagttcctcactgaataaaccaaaattgttgatggaatggaagtccaaatgatcaaacatacaatagaaataggtaattctgaaagttggggaggagaaacccaaacaatttctccttatttcaagacataagatgatttgtaattttttaacacaaacgacattaagcttaatgttgtattggagaccatatctagaatttcatacaagtaatatatttatattatgaaagtgctgatcttgcaactgcttacacattgaatcaaatgaaagaatcagcaaatatatggagaagtacatggattaatggcgttctctgcatgacagcacCATCAGGCCCACCATAGAACTGTAGCTTTGCTTCTTTCCAAGCAGAAATGGGCTCTTCGTTGCCAATAACTTGAATGTTTCTCTGCAactgcatagcaaatgataattagtaagaacataaaatgcttccaagaagaaacaaagtaatttattccacccacCTTTCTCAAGATTAAAACAAAATCTGATGCAGTGAGCATGCCTGTTATGGTTCCCTGACGGTCATCCCAAAAAGGAACCAGAGCAAGACCctatgagacacaaaaggttcgaagctattcttaaattattaaactgatgccacgtatgaagtgcagatgaaagaagtgcctgcttctaggagcgattttgttgtgtttttaaaccgcaaaacataataggaaaacaaattaaactgctacttaaaaaggcaaacaattgctagcacaactttaaaaattcttcaaaatgaaagtaaaaacagagcaaagttgaaatgagagcaaacaagcaccatagagggaaagtgaactatttgaagcaactctagcaagcacagtaacatacataccACATCATGCATTATTTTAAATGCTTGTTTAACAGGAAGCTGAGTGTCCAAAACTGTTAACtgaaatgttcatatgaaatccgattatacacatagtctaaagagaagtgctggcttgcaagaaataaacctaacCTTGCTAGAAAGGGGAACAACGTCATATATGGTATTGTGTAATAATATTCCAGAGACCACATGGCGGATAACTGCTATTTGCATGCTTGGGTTCTGAGATGATGGCTCCAGGGGCAT

ctttgtttatttaaggccacagtaaataacagaccattagttatcaggaatatggagaacaagaaaatataatgttaaacttctaagacatactgttttcaaaatggtacccttatccatattagttcctctgatagaaggctctggctgcacaacgggtagtacattgttttccacaagcacttcattgctgatcagtccatattcatcacgtacaaagggttttgtctcatcacacctccagacaccatcaaccaaaaaccggtactaaattgcacaaaaatgccatataaatgtatgtggcatagaaaatgtcacaggagaaacataatatcttatgcaaatagctgggcagtggccatttgtacagcaaatatgcactactatagtatcatgttcaaatagcttgctaaccattgaactgaatcaaaccatcacatgtgaacatcatgatttacagaactcgcaataacaagggtgtgaatttggtacctgtgcgcaatgttatgtccaagaattacattgatagatgaaaaagcgacacatcaaatacaaaaatccatcatgaatatgtcaaatatatcatgtttcgatcaattgctggaattgaaaaacatattgaagttcaaaatagttgtctggtatatgcaaaagtagttccatgtaaagccaacagttaaggggcattcaagattcatttagtctaactgcaagtactaattgctggggaagaagag

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gtgcaataaaaactccatgtacagaaacctgagagacagaagtgtggttgtatttaatcatcactcactttacaatggcgttaaatggctgctttctgatgcaacaactgcaatggcattctaccttacaggcattatgtaacggccaaaacatcttatcgaaaacgaaagagacagtgggatgtctttacaggcataaagattcatgatgcctttatgggggtgatctcgcaaatcaaattgcgaagaatcccgagctcggttacttattttaggaataaaagcattaacaaacacaattaatttaggaataaaaggattaactaaaaatgcagtcatttgctcctggtattttctctgttcagtagatggacaggggctcaccattccactccttgaggcacttgcgcagcgatgtcttcctaaaatgagcgcttgaagtactcgtgataatcatcctacataccagctccacatgaagtagcatctccagtacgatgaacaagatatagaaattttaggcaataactacatcaagaaactgaaggcaaaaaacacaggactatgaccgcgaactgaaagcgagcagctcaaaaaacacggtattccaccagtgacccagtcatcacacgctgaaagttccacaggtgtggtttcacatgtctacatcccagctattgacttcaatgagtggtatcaaatttggtttaaaggagagactagaccagtggaaagccagactggaggagttctcttctcaatgaaacatctggcgctctggtaggttgtcgagttccacaaacgtgcgggaatcactacaatgtcctagtgccatatcagggagaagttgactgcttcttgcggaaattacagaagcacatgcactgcagaaccattccatcgaactgacactatgacacccgctgactaccaatccaatttgatgtcacttgcaggcttgcagcgcaccgcgtaccatgataacaatccagataaggggctcaccgtgctgatggggtgacgagttgaggcgctgcctgcgttctggcccttccaggaggttgatgttgacaacaacattttcttaaacaccttcggcccgcccgcccttccgcaggaacaacacaacaaacaggccacatactgtaaataacgcccccacagagaagcagtagataatgcagagcaaaataaaaaacatgagctctgtttgtgttcctcttcaagcgagaggccctaacgtcaagcatcggaggccctaacgtcaagcgtgacagcgacgacgtcctccagcatcctcgcgatcctcgtcgagtgggaggaggagaatggatttgttgtgggagagggagcgaggcggctgcggataggggatgactacaccgcgcgacgtggatgggcgggtgggtgacgctgccaggcagggcaggcgtaaaggtttagggagaacacaaaagcgaatgaatcaagaacgcgggagagcacaaagcgaatgaagtaacctcaggaatccatatcctggattgtcgcgccttcgcccactgccgaccaccagcagttccctcccctcctctacctccctccccctgctggatctagccttgggctccacccacgaatccaaaccctagccccgcagttgtctcggtggaaccaggccatcgcgggggagggagcggtggatccggtgtgcgggcatgtgggagcgatggatccggtgtgcgagcggtggattcggtggaaccagaactcgatggtgctcgttccacctccactgtgcccgttgtgcccgcggtggagcacctatttcacgtcgccctcgacgcgcatgcgtcgctggttccaccactcggactcgacgacc

>gene6Best maize hits:

NM_001174809.1Zea mays uncharacterized LOC100382044 (LOC100382044), mRNA >gb|BT062978.1| Zea mays full-length cDNA clone ZM_BFc0013I21 mRNA, complete cds

NM_001196777.1Zea mays uncharacterized LOC100502299 (LOC100502299), mRNA >gb|BT087700.2| Zea mays full-length cDNA clone ZM_BFb0162H19 mRNA, complete cds

EU975938.1 Zea mays clone 506018 hypothetical protein mRNA, complete cdsEU964704.1 Zea mays clone 280953 40S ribosomal protein S17-4 mRNA, completBest non-maize hits:

NM_001055203.2 Oryza sativa Japonica Group Os03g0103300 (Os03g0103300) mRNA, complete cds

AB433794.1 Oryza sativa Japonica Group qLTG3-1 gene, complete cds, haplotype: 5AB433793.1 Oryza sativa Indica Group qLTG3-1 gene, complete cds, haplotype: 4AB433792.1 Oryza sativa Japonica Group qLTG3-1 gene, complete cds, haplotype:

ATGGGGGAGGGGCGTGGCGGTGGCGGTGGCCGCGGAGTTGGTGAGGCGGGCGTGGAGGTAGACAGTCTTGTCCCTGGCGTGGGTGAGGAGCGCGGTGGTGGAGGAGCGGATTGCGGATCTGCCGCAGTGGGGAGGCGATTGACAGCGGCTCTGGTGTGGTGGGAGCGCGGTGGGGGAGGAGCGGATTGCGGATCTGCCGCGGTGGGGAGGCGATTGAGAGCGGCT

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GTGGCGTGGTGGGAGCGCATCCGTGCGATGAGGAGCGGAGGGACAGGATTGTGCGGCAGAACATGGTGCACTATTGTGAACGTCTACGTTGAAGGTTTATAG

agtagtagagatgacaaaaaacttatgcattgcgtgtaataccaactatatatcggtaaaattactggagaagttcgaatgtgaaaatttcattgaagattttattttaaagaacactaaaagaataatgctttttaaaatgaagattatataatatttagtcatcgttattttatgtgcacatatatacatagcattacttaatatattttttgctatattttgtacggagcctcccaaaatgcgaggacctgttatatatatatatctctactactccttaagagggtaaggagggcgtccacaccctcaccgcggctccgccctccccaccccgttgatctcgctgccaccgcgcacgcccccgtcttcgtctcccccgcgctaatctcgccgcggcagtgcgtcctccgccccaccttctcgaaaatgtcgtcgcccccataaccgcgcgggccggcaccgcggcgcgcagatctcgctccggctcctcgctggcacaaaccacacgcgcaccctcgacccatggcatccccaaatcccgcccaggttcctctcccttcccattcgcggacg

>gene7 Best maize hits:

NM_001196826.1Zea mays uncharacterized LOC100502348 (LOC100502348), mRNA >gb|BT087877.2| Zea mays full-length cDNA clone ZM_BFb0280P11 mRNA, complete cds

BT067383.1 Zea mays full-length cDNA clone ZM_BFc0037B10 mRNA, complete cdsEU975326.1 Zea mays clone 487586 mRNA sequenceDQ244682.1 Zea mays clone 10027 mRNA sequenceBT016603.1 Zea mays clone Contig436 mRNA sequenceHQ140759.1 Zea mays Mu transposon insertion mu1013340 flanking sequenceBest non maize hits:XM_002444661.1 Sorghum bicolor hypothetical protein, mRNA

AP006170.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15

XM_002454373.1 Sorghum bicolor hypothetical protein, mRNAAF133839.1 Sandersonia aurantiaca papain-like cysteine protease (PRT5) mRNA, complete cds

NM_001070477.1 Oryza sativa Japonica Group Os09g0564000 (Os09g0564000) mRNA, complete cds

AK071733.1 Oryza sativa Japonica Group cDNA clone:J023107H18, full insert sequ

ATGTCGTCGCGCGTCGACATTCGCGTCCCCAAATCCCCGGTTTCTCTTCCTTCCTGTTCGCGGACGGCGCTTCCGCGCGTCGACGTTCGTGTCCCAAATCCCGCCCCGGTTCGGCGCTTCCCCACATCGAGGCGCCACACCATCGCCGCCGGTCCCGATAGCGTCGACAGCGCGTGGCCCCATCGTTCGCGAACCAACCTGGCCAAGGGTGCCCTGCTGCTGACGGACAAGGACCTGGAGTCGGAGGAGAGCCTGTGGAGTCTGTACGAGCGGTGGCGCAGCGTGCACACCGTGTCGCGGGACCTCACGGAGAAGCAGAGCAGGTTCGATGCGTTCAAGgtgaactctaggcacatcggcgagttcaacaagaggaaagacattcctacaagctcggcctcaacaagttcgtggacctaacgcagGAGGAGTTTGTCAGCAAGTACACGGGCGCCAAGGTCGTCGACCCCGACTCTGAGGCTGCCGCTGCCAGGCTCGCCAGCGACgtgtgcgtgtcgtccagcgacgagtcgccgccgcaactggccgcctctgccgtgaataccatcgtcaccgccttgaaggaccactgagtcgtcaccgccgtgaacgtcgttaatttattctgtattgcagACTGGAGAGACACGAAGCCGTCACCGCCGTGAAGGACCAGGGGCAGTGCGCCAGCTGCTGGGCCTGGGCgcggtatcatttccttgcttgttttacaagatccattttgatggtggccatgtagtcttagctgagtgacgacttgtttttcatagatctgatctgagtttgtcatgatgtcgtgcggcgatctgtttgtctgagttcggagacaggttagtattctatcagatccaatggttcattggttttgtcacttggacatggattcggtggtttcaggctcaattgttcgtctcctgttgt

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ggtacgatcagaaacagatactgcagccgttgcctgcataccaggtgaattgtgtggagaccttcggtccattcttatgttaactgttgatcacgcttgtggccttctggttgtttgtccttcttaaacttcagatgcaaggagggacactagccgtatgtttgagagacactagccgtgcagcacaatcagatgcaaggagggacactagccgtccttcttaaacttcagatgctgatctcaattttttcacaaagacactagccgtgcagcacaatcttacggtgtctagagcatgaaagctccattttttcacagcatgtgctttgattttatggaggaggcgtatgtttttaccacttactcatgaaggctccaattttcattagtgcatacccttgttttgcagttttcatgggtggtacatgcattttcttccactaaatatcttgaagctatacattgttgtatagcttcccattgagactgcctttttatttgaatgtaacagggacccttttgtaatcaccttgttctttgccttgtcctttgaatgggtaaagctagatctgtcaatagaatacacagcctgtttgagagagctctagctgatgataagttgcaaaagtctgtcatgttgtggatttatccttgcttattgtttaattactaatcactatattttcattttaggtagcacaggaacaccagttggaaacaaaaatggagaaagcagctcagaatgaagctctgttttgtttttttcacagcaaccaagtgcaactagattaattaatctcacacatgagataaagcttaagaaacatggtcttttgccttcgcacaatcattttagtggatcaaagatatgtgatgatcaaaccaaatcaactccaaattcagatatgggttctttggattatgaccttaccaacaaaagctagactacaaaagtttgttctaactcctaaacgttatgttcttttatgactcctgaaagtacagagtgacatatactatgtgcagatttttgtcgtttcttactctctgcttgcacttcatataaacaaattaatggttgtagttcttgtgtttcaacttactgcaatgttatatttgaaaaaaagatattattatattcctttccctgcagtattccatgataacctctatttcttcattaggcaccacatttttttggccataatgctaattattttttctaaaactcaatgttggatatttacaccagcattttcatgcttaaaaatggcattcaaacagcctataaatccaataccacgcctaaaatgaatagtaaaactataactataagaggtttcattgtgcaGATGTCCCACTCCTTTCGTCCCGTCGAGGGTGTCGAACAATGAACGTGTTCGATTGTTGGTCGTCTTTGCTGCTGTGCAGCTCGGAGTTGTATGGGCTGCACAGATCGATGGATTCCtggtaggatcggatcttaaggacctctatctattttgttcatctgacaaataaaaacaagttcagacagttcctaaatcactgaaggagccgcatcaaatagagcttgactatataaaaatgttgaaaagttataaaacaatttcaaattttcttctaaataataaatagctctccctctataaaaagaatttagaactgacattagcttcggtttgtgccaaaattgaaaccgaataagccgtcaaggtattgtggctttggatctagcccttaagcatggtctcttagaactgacattagcatctaatctcaggatacacgtactcagtaatctatattttataataataatttgtacatgcacttactagatgttgaattatatcctcagcatgcataacatcttgtgagaactgagatcctgtcatagttgctgtttgggaagccaatatctcaatgggatcttgagtagtagcatcctcagttactttgaaactgcggaatgattttctcctgtccattaacagtttttcaaattttctccattccaatttatcatagaaggcactgtatatgatagcgtacagtttagaaatcaaatgttgccgccataataggtaccacatgttgtcactggttgtatgataattacttgatcttactgaccctgcttgttcttcaGGCTGGTAAGCAAGCACCACCAGAGAAGTTTGTGATCCCAGCTAAAATCAAGCTGACACTGGAGCCATGGACGTCGAGCTTAAGAGGgaggtcatcaagaaggcatacgagatggaccttgcccagttgtacaaccagtgacactaccgctacagtttctcaaggataggggtgttgcttagcttgtagcaaccgataacaacatttatttttgtacttcgaactatgtttgaaagcttgtctttcttttcagactgtggttgactggtaaatcaattgcAGAAAAAAGCTGAAGATTACAGAAATAGTTTGCAAAAAGAAGCACAAGCAAAAGCTCAAGCATTACACTTTGAAGATGAATTAG

ctagaaaaagaatgtcggtattgaaaagtcgctttttatatcttcttttagctacttcctataatgtttataatgttgttgcgctgctatgaagctagcacacaatttaaccaagcatatccattttggcacacagatcatgctccacagaggcgataggatgctgaactcgtgaagataaaagaggcatcttcccttaggaaagaagctaggcgtgcaacacccgacatctaactattctttcaatatatactgagtactgactcgtacaatatagcttttttactgtctttttgcacacacttgttacctttttcatatcacttacaaccatattgaatccttgatataaatctgtatcttattatatcttgacctggcccatgtgctattattttgtcagttatcttaactgttgcacaactatgtgtttttcgattccacatgtatttaccatttcttttactttgcagttgtatgtatagttaggacaatctggtgactatatttattggttcaggattggatctctagcctcacaagatcggcgacttgtatgataaattcacttacagttaagttacctttggtcaactggattctggggcatgcacttgtagctactggcaacttttagaccatttttgtaatcttttcaattgaaattcgtggctatttgagagcttctctgcgtttcactgatatcttccttatcaccggtgttgacgcgtggtagtggaaaagacacctaaacaattcatttttgtttggttggcaatgggagatcacacctaaacaattcatagcattaaggaatgcattcgacccttaccaacatagagctgactaacttgcgaaagttagcgaggaaccttccatgacattttgctctaggtattgcttttgacagtgtcaatattacttttgactataatagattttacttgttgtgttccagaataatgtgtataatcttgcataaagtcaggccctgtgtttcttaagagcaaaggactgagttgtgttgctactttgaacatgaaaataaaatgtggttgtgcactatgtattgcatatctagaattatgta

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tgaatcatctacctcctgattagataagcgttctcaattttttaaaatatttaccagatattctattctatgctactcttgtaatttgtttcattcaactatatagggagtacccagagtaaggagcactctgccagtttagatgcatggaggggtgttgatgcctttgcgacatcaagcaagtttggtaaacaaactttcagtctagcagattacagagagcactgagagaacctgttttatcggtacgacattgtttactcactataacttctcacacagaaaacgacatagtgatctatccatctgagtcaggctatttatttgacaactgatacaaattgatgtagcaacaaagttttccagttttaaaaatatttttgtatgattggaattggagggttcaaatgatgaagggattttagaaatctataatatgtatgccttttctttagtctccctgcggaatgaggggctcaacttggttaagagcaggttagctaaatgctctatgagagacggagttctccacaactttctttggggctctatgcaacagccactcatcaactgtagtaggaggagggcatttatacataagttattgtagtaatatgtttccgttgcaacgcacgggcactcacctagtatatatatatatactagctgaatgcccgtgcgttgcaacgggaatatataataccagtacactacgataacttatatacaaaatgtgtgttataccgttataagaaaatgtttcataatcaatttatgattctggccatacataaattttgttatttataatctatttgtttcaccactatattgcaaccatcagtatcatgcagacttcgatatatgtcacgatttgcatggtctcatcattggagagcacgtttcacacataccggaagaaattccctttacatcgttagtcatcagacacgtaccaccgtacacttttgcttaaacaaaaaggcaagtgtgtgtttacgaagagaattaaaggcaagccagcacaaaagctaccccaacggtggcgaggatgacgaactggtcattgttgtcggtcctcctctgcgtcacctctggcgccaagatgacgccacagtcctcgatatagttgtcgtcgaacgcgcgcgacataccgagtactgatgactcttggctgggctgtaaaacgagtgctcccggggctcatcagcaaggtagtacccctggctgttgcaccaccggatgcgctactcctctacatacatcgtgttcaaggacactcatacaacgtaagcaacgaccatcgtctcagcgcacaagaattcatggccagtcagtagcgacttacgtggcaggttgggcttcaggtggacgatgagctggacgacgtgatggcgtcgtcgtcgaatgcggtgccaacaacccgagagtcgtcgacgttggcgacgaccatgaggtccccctgcttgacgatggacagcgcggagcagccgctctgcaccgcgtccaagcggcggctgcgccggagcttgtcgtacatagcggcacatgcggccacgtaggactgtttctagaggtcgaactgatagtcgccaagtttttcttgtcgtcgatgagcgaccccaacacgagtgcctcctgttaatggtgtttgttcggggttttcaagtaagaaacatgaattcatgtttggcgttggtttataaaaatgactcacaagtcagatctatggaaaaaatattacgaagaataaatatcacgcatgcaaaaaagaaatttaagttgaaaacattattcaaacaaaagaaattgcatgcaaggctcttctttaaatactactccctccatccaaaaatataattgaagaatctcggtgatacttatctactacacgcattgtgcaagggtagcaggtggacttggggagagatatagtagatgtattttctgttataaatgtaaacataaacacatatgtggtgtagtggtagctactgctattatttgtttgagaggttttgggttcgaatccccttgagaccatgtttatttttttaattttagctaggcgtcggctgtacgggggaatgagaatgagctttacagggaggggaatcggaacgcggggaggagggaatcggaaaggcacacaacataggaatggatgcgcaatggggtagcgactactattacagtcttaataagtagtatatatatatatatatatatatatatatatatatatatatacgttggtttttaaggtgatctggatatttgagaatcgtgatttaaacatatctctctattcctggataaatcaagagggtgtttgaatgcaatagaactagtagttagtgactaaaattagttgagacattcaaacaccctagctaatagttcagctattagtttttttgtaaattagttaatagttagatagctatttgttagctagctaatttcactaataatttttagtcaactaacgattatttctagtgtattcaaacacccgggaatcttaatccaaataaaaacagacgatattattaatattctttggtctaatatttagacagactattattaggtaggatcagccagtcgtgctgcagcaaagtattgagtcgaattgtttgaaatatcagcttagttttgcaagattccaaggtccaggtacatcacgtatcacttagttttgcctgacggctgatggtcttcatacattattagaaggaaacaagcgcgcaacagaaaatcaactagaggccgtcagggacacatatttacattattagactggtccaacggaagtttaaaaagcaaaatacaactcgggcttgacacctgatcggatggctttgagttagcacgtactacttctacttgatctgatcggatggctttgagttagcacgtactacttctacttattgaaggactcgagaaagaagcggttggggtctccttttctgctcaaggtcctcaaaataaataagttgctttgattcatccaacagatatactgaatgaccaaatgtcaaagctagaatgacgaagcgatgaacgcaatagacacaacaaggtctggcaacaaaccagatcaagggtagaaacacaactttatccttagtgtttgtattaaaacatatgtatagatattaagagcacaattgcaatttcgtctgggttgcgtcccctgctataaatagatgaacattacccacatactgttcacgtgatcattgaggaaagtaattagagaaagcccaaagtgcaatctcaattattcattctccgaaggttactcttgtatttcccttcgcgtgaagccgaaggtacaaatgtaatcatttattcttgtattgctcaaagtatggtcttatcaacatatatataaataaaagaaaggaatagttaatctcttatcattttctcatcattttaacatgaataccttcgtcatattataaaccttcacttacaaacaaccttcagcgaaggattgattgaaggtgaagttacatattcactatcattttcgtctaagaactattatcttcaagagaagataatgcttcgaaggacgaatgtccttaatgttcaatattgtgttgccttatttttgaatcacagcaattgaaaacaagtaaccaacattggcgctcacctccggtgaactcacttccacaacaatgaccacgatcagccatcgagcttcgtcactagcaatgacgaagctcatactctctatcacaggcggttcaagcttcgag

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ccagccaacaagaagcaaaaaaggaagcccagcgaagtgtgcaacatgttggaatgcagggaccctatgtcaaatccaaatggtctcatgttccaatcactttctctcaagaggacctttaactcaaagactacccacacaatgatgcc

>gene8Best maize hits:AC196774.5 Zea mays BAC clone CH201-435B12 from chromosome 5, complete sequenceAC191361.5 Zea mays BAC clone CH201-216O9 from chromosome 5, complete sequenceAC160211.1 Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequenceAY555142.1 Zea mays BAC clone c573F08, complete sequence

AF464738.1

Zea mays cultivar B73 putative gag protein, putative gag-pol precursor, putative transposase, putative copia-type pol polyprotein, putative copia-like retrotransposon Hopscotch polyprotein, putative gag protein, putative prpol, putative prpol, putative pol protein, putative pol protein, putative gag protein, and teosinte branched1 protein genes, complete cds

AF049110.1 Zea mays retrotransposon Cinful-1, complete sequenceAF123535.1 Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cdsJF791320.1 Zea mays subsp. mays cultivar Yu87-1 clone 87-1tb1to69k, complete sequence

AY530951.1Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds

AF049111.1 Zea mays retrotransposon Cinful-2Best non maize hits:

EU053446.1Mini-chromosome MMC1 retrotransposon xilon, complete sequence; hypothetical protein gene, complete cds; retrotransposon xilon, complete sequence; satellite CentC sequence,; and retrotransposons cinful and ji, complete sequence

XM_001545031.1 Botryotinia fuckeliana B05.10 hypothetical protein (BC1G_16418) partial mRNAAC243237.1 Panicum virgatum clone PV_ABa020-K05, complete sequenceAC243260.1 Panicum virgatum clone PV_ABa103-K10, complete sequenceAC243249.1 Panicum virgatum clone PV_ABa094-D05, complete sequenceAC243250.1 Panicum virgatum clone PV_ABa094-D10, complete sequenceJN800064.1 Saccharum hybrid cultivar R570 isolate scTat_7.1 retrotransposon, co

ATGGTTATATCTTGTGTCATAAAAGGATTCTTGGTCCACAATGTTCTAGTGGATACATGCAGTGCATCGAATATCATCTTTGCCAAAGCTTTCAGACACATGCAAAAGCAAGAAGATAAGATACATGATACAACACATCCTCTATGTGGCTTCAGAGAGAAACAAATAGCAGCACTTGGCAAGATAACAATGCCAATCACCTTTGGTTACATACACAACACAAGAACTGAGCAAGTTGTATTTGACATAGTGGACATGGAATACCCTTACAATGCAATCATTGGAAGGGGAACATTGAATGCCTTTGAAGCTGTGTTACACCCAGCATACTTGTGCATGGAAATACCATCAAATCAGGGTCCAATCTCTGTACATGGAAGTCAAGAGGCTGCAAGAAGAGCCGAAGGAAACTGGATAGACTCCAAGGCTATTCACAATATAGACGAAGTTGAAGCTCACGAGCAACAGAAGCACATAAGGGATAAGGCAGCTTCGGCAGATCAGCCAAAATCCATACTCTTATGTGAAGATATAGCTGATCAGAAGGTGTTGTTTGGATCTCAGTTGATCAAAGAGCAAAAAAAGAATCTAACAAAGTTCTTGTTCCACAACAAAGATGTATTTGCTTGGTCAGCCAATGACCTATGTGGTGTCAACAGAAACATCATTGAACATTCTCTTAATGTAGATCCTACCATCAGGCCAAGGAAGCAGAAGCTTCAGAAAATGTCAGAG

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GATAAAGCCAAAGGAGCAAGAAACGAAGTTAAAAGACTTCTCAATACTGGAGCGATCAGATAA

gtcatttacccacaatggcttgctaacactataatggtaaaaaaggcaaatggaaatagagtatttgtattgactttacagatctcaacaaggcatgcccaaaggatgagtttcctttgcccaggatagactcactcatagatgcagcggccactttagagctcatgagcctgctagattgttattcaggatatcaccagatatggatgaagaaagaagatgagcataagacaagcttcataacccccaatggtacataatactacctttggatgcctgaggggctctagaatgctggaggaagcttcagcgggatgatttcaaaagtgttgaatacccaaattggtaggaatgttcgctatttgctctaaggttcagcacttgtttcgtcttcttcatcatcatactacaaaatcataagtatatcagcacatgaagaagagaagaatcagaaaacattatggaaacagtttgaaatatacctcatccaaaagctcccaagcttcggcaccagcaagatctatgccacctttcatccaaattagtgtgataaatcggttggcaacatttctagcttcggttgacgttgttgctatatcatttgaagaaatatcaaaatttggcttcccaacagttttcaggtgggagcatccaaccttctcaagatcaaagatgtgacacaagagggaaccagtgcacaaaagtcaccttagcccatcattacttcgccgaaggtatctatttctccttctacccacttcagcgctccaggtaagtcgttaggggcataattctcttctttagacgtcgtcccgaccgagtggaatacttcgcgtagccagttagagcatctgtagacaatctcaaaataattatcctgaagatttttttcaaagtttctactagctttgagttgtctcggtccttcgttttaacttcttttttcaaattgtcaaattcaagttgaaggcgacaaacttcgtcggcatgatctgttttaattttctccagctcagttgttaatcgtcggatgtctttatcttgattcgcatttttgtctttgaagcttgttttcctcttcctcatcttcattagccctctgagatttggccagatccccgtttaatgactgaattgtgacgtctttttccttatttgcttctcaaagtttttcattttcaatttccaacttagaaataacaaactcaattttttgatcctctggatcttgttgaagctttaaggctttactcagcagaaaactttgcatttttacaaaggttgaaaaaatttaggtatcttactatttttattctaagacagaaagtatgatgcataaacgaagctttacttagattacgtaagccaagctaccggcgatatgttgtttccttatgctgcttagctcactttcgagcttcaagaagccaatattcttcatcaaagtgttaaccactctagccctgtcgcggtcaggaatgcactctagtaaattcaccttccaaagcaaactccttcagttcagaaatttcttcagcacttagctccccactagttaggtgtctgaagtcgaaggtggcctctcccaggcttcagtttcttgcaaagacgaagtggtcgtcccaactttttaagctctacagcctttgaaagtcgcctacaggggggtgaataggcaaatctgaaatttacaaactttaagcacaactacaagccggggttagcgttagaaatataaacgagtccgaaagagagggcaaaaaacaaatcacaagcaaataaggcggatgacatggtgatttgttttaccgaggttcggttcttgcaaacctactccccgttgaggtggtcacaaagaccaggtctctttcaaccctttccctctctcaaacggtcacctagaccgagtgagcttctcttctcaattaaatgggacacttagtccactacaaggaccaccacaacttggtgtctcttgccttgattataattaagttggaaacaagaaagaaggaagaagaaaagcaatccaagcgcaagagctcaaaagaacacaaatgtctctctctctagtcactaaattttttggagtgattccggacttgggagaggatttgatctctttgattgtgtcttggaatgaagtctatagctcttgtatgaggtttgatggctgaaaaacttggatacaatgaatggtgggtggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn