sandro rusconi (09.03.52)

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Sandro Rusconi (09.03.52) UNIFR Rusconi 2005 Gene Therapy growing teenage, what have we learned? March 1, 2005 ECPM course 1972-75 School teacher (Locarno, Switzerland) 1975-79 Graduation in Biology UNI Zuerich, Switzerland 1979-82 PhD curriculum UNI Zuerich, molecular biology 1982-84 Research assistant UNI Zuerich 1984-86 Postdoc UCSF, K Yamamoto, (San Francisco) 1987-93 Principal Investigator, UNI Zuerich, PD 1994-today Professor Biochemistry UNI Fribourg 1996-2002 Director Swiss National Research Program 37 'Somatic Gene Therapy' 2002-03 Sabbatical, Tufts Med. School Boston and Univ. Milano, Pharmacology Department 2002-05 President Union of Swiss Societies for Experimental Biology (USGEB) 2002-06 Euregenethy Network (EU-harmonsation of biosafety and ethical aspects in gene therapy) -xx Head of governmental division for culture and university affairs of Canton Ticino

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UNIFR Rusconi 2005. Sandro Rusconi (09.03.52). 1972-75 School teacher (Locarno, Switzerland) 1975-79 Graduation in Biology UNI Zuerich, Switzerland 1979-82 PhD curriculum UNI Zuerich, molecular biology 1982-84 Research assistant UNI Zuerich - PowerPoint PPT Presentation

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Page 1: Sandro Rusconi (09.03.52)

Sandro Rusconi (09.03.52)Sandro Rusconi (09.03.52)UNIFRRusconi

2005

UNIFRRusconi

2005

Gene Therapy growing teenage,

what have we learned?

March 1, 2005ECPM course

1972-75 School teacher (Locarno, Switzerland)

1975-79 Graduation in Biology UNI Zuerich, Switzerland

1979-82 PhD curriculum UNI Zuerich, molecular biology

1982-84 Research assistant UNI Zuerich

1984-86 Postdoc UCSF, K Yamamoto, (San Francisco)

1987-93 Principal Investigator, UNI Zuerich, PD

1994-today Professor Biochemistry UNI Fribourg

1996-2002 Director Swiss National Research Program 37

'Somatic Gene Therapy'

2002-03 Sabbatical, Tufts Med. School Boston andUniv. Milano, Pharmacology Department

2002-05 President Union of Swiss Societies for

Experimental Biology (USGEB)

2002-06 Euregenethy Network (EU-harmonsation of

biosafety and ethical aspects in gene therapy)

2005-xx Head of governmental division for cultureand university affairs of Canton Ticino

Page 2: Sandro Rusconi (09.03.52)

Gene therapy: A 15-years hailstorm of highly emotionalised good and bad news

Gene therapy: A 15-years hailstorm of highly emotionalised good and bad news

UNIFRRusconi

2005

UNIFRRusconi

2005

BBC, NBC, CNN,...

New York TimesWashington PostTimesLe MondeFrankfurter Allgemeine...

Feb 1990 First trial ADA deficiency

Dec 1988 IL-2 cancer treatment trial

Mar 1994 SAE cystic fibrosis

NatureScienceNEJM...

Jun 1995 Motulsky NIH report

Feb 1996 r-lentiviruses

Oct 1998 VEGF ischemia

Jess

e Gelsi

nger Oct

1999

A Fischer, E Thrasher Paris & UK Dec 2000

AAV germline Sept 2000

C Bordignon, Milano trial May 2002

First SAE Paris Sep 2002 second SAE Paris Feb 2003

Internet

No previous medical procedure generated so many discussions

so long before being ever clinically applicable

Page 3: Sandro Rusconi (09.03.52)

1 Gene -> 1 or more functions1 Gene -> 1 or more functions

RNA(s)DNA

GENE

Protein(s)

2-5 FUNCTIONS

Gene expression

Transcription / translation

>300 ’000 functions(>150 ’000 functions)

100 ’000 genes(50 ’000 genes?)

UNIFRRusconi

2005

UNIFRRusconi

2005

Multifunctional character implies: cross talk with different pathways unclarified hyerarchical position unclarified side-effects potential

Ergo to say

'one gene->one function' is like pretending'one disease -> one drug'

Page 4: Sandro Rusconi (09.03.52)

Recap: what is a gene?:a regulated nanodevice for RNA production

Recap: what is a gene?:a regulated nanodevice for RNA production

RNA(s)DNA Protein(s)

GENE FUNCTIONTranscription / translation

codingspacer spacerregulatoryDNA

RNA

Therefore, to fulfil its role, a transferred gene must include:

regulatory sequences for Transcription proper signals for RNA maturation/transport proper signals for mRNA translation proper signals for mRNA degradation

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 5: Sandro Rusconi (09.03.52)

1 Organism -> more than 105 developmentally and genetically-controlled functions

1 Organism -> more than 105 developmentally and genetically-controlled functions

2m 2 mm 0.2mm

0.02mm

DNA RNA Protein

0.001mmRemember1 Cm3 of tissue 1'000'000'000 cells!

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 6: Sandro Rusconi (09.03.52)

Reductionistic molecular biology paradigm(gene defects and gene transfer)

Reductionistic molecular biology paradigm(gene defects and gene transfer)

GENE transfer FUNCTION transfer

GENE KO FUNCTION KO

GENE OK FUNCTION OK

DNA

GENE

Protein

FUNCTION(s)

Gene transfer implies either: transfer of new function, or transfer of restoring function, or transfer of interfering function

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 7: Sandro Rusconi (09.03.52)

Examples of inheritable gene defectsExamples of inheritable gene defectsUNIFRRusconi

2005

UNIFRRusconi

2005

Polygenic defects Type estimated(‘ frequent ’) min - max

Diabetes poly 1 - 4 %Hyperurikemia Multi 2 - 15 %Glaucoma poly 1 - 2 %Displasia Multi 1 - 3 %Hypercolesterolemia Multi 1 - 5 %Syn-& Polydactyly poly 0.1 - 1 %Congenital cardiac defects Multi 0.5 - 0.8 %Manic-depressive psychosis Multi 0.4 - 3 %Miopy poly 3 - 4 %Polycystic kidney poly 0.1 - 1 %Psoriasis Multi 2 - 3 %Schizofrenia Multi 0.5 - 1 %Scoliosis Multi 3 - 5 %

Monogenic defects estimated(‘ rare ’) min - maxCystic fibrosis, muscular dystrophyimmodeficiencies, metabolic diseases, all togetherHemophilia... 0.4 - 0.7%

Predispositions Type estimatedmin - max

(*) Alzheimer Multi 7 - 27 %(*) Parkinson Multi 1 - 3 %(*) Breast cancer Multi 4 - 8 %(*) Colon Carcinoma Multi 0.1 - 1 %(*) Obesity Multi 0.5 - 2 %(*) Alcolholism/ drug addiction Multi 0.5 - 3%

Sum of incidences min -max (all defects) 32 - 83%

genetics behaviour environment

Ergo: every person bears one or more

latent genetic defects many defects are not manifest

but lead to predispositions there are also protective predispositions

Page 8: Sandro Rusconi (09.03.52)

Not only the genome determines the health status...Not only the genome determines the health status...UNIFRRusconi

2005

UNIFRRusconi

2005

genetics behaviour environment

Muscle distrophy

Obesity

Artherosclerosis

Alzheimer

Parkinson ’s

Drug AbuseHomosexuality

Familial Breast Cancer

Lung Cancer

Sporadic Breast Cancer

also acquired conditions may have a genetic component that modulates their healing

trauma fractures burns infections

Page 9: Sandro Rusconi (09.03.52)

The major disease of the 21st century: AgeingThe major disease of the 21st century: Ageing

60

70

80

50

1920 1940 1960 1980 1991900

Life

exp

ecta

ncy

(CH

)

4

20 40 60 80

100

10

1

canc

er in

cide

nce

1900 200020 40 60 80

100%

M

E2/E

E3/E4

E4/E4

Alz

heim

er’s

fre

e %

1900 2000

aa getting oldcomp2.mov

This major challenge means: higher investments more financial returns long term treatment customised treatment social security dilemma

will molecular therapy boost the efficacy of treatment of age-related diseases?

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 10: Sandro Rusconi (09.03.52)

The THREE missions of medicineThe THREE missions of medicine

Prevention

Diagnosis

Therapy

'Molecular Medicine'Application of the

know-how in molecular genetics

to medicine

+

+

+

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 11: Sandro Rusconi (09.03.52)

The FOUR eras of molecular medicineThe FOUR eras of molecular medicineUNIFRRusconi

2003

UNIFRRusconi

2003EightiesGenes as probes

ok ** ** **ok1 2 4 53

NinetiesGenes as factories

80 85 90 95 99

10

50

Y2KGenes as drugs

80 85 90 95 00

1000

3000

Y2K+n Post-genomic improvements of former technologies

Page 12: Sandro Rusconi (09.03.52)

Somatic Gene Therapy (SGT)Somatic Gene Therapy (SGT)

Definition of SGT:'Use genes as drugs':Correcting disorders by somatic gene transfer

Chronic treatment

Acute treatment

Preventive treatment

Hereditary disorders

Acquired disorders

Loss-of-function

Gain-of-function

NFP37 somatic gene therapywww.unifr.ch/nfp37

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 13: Sandro Rusconi (09.03.52)

The SGT principle is simple Yes,...but the devil is often in the details

The SGT principle is simple Yes,...but the devil is often in the details

There are many things that are simple in principle, like...

getting a train ticket... ! try this 5 min before departureand with a group of Chinese tourists in front

parking your car... ! try this at noon, any given day in Zuerich or Geneva ...

counting votes... ! ask Florida's officials ...

gene therapy... look at progress in 13 years...

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 14: Sandro Rusconi (09.03.52)

Why 'somatic'?Why 'somatic'?

Germ Line Cells: the cells (spermatocytes and oocytes and their precursors) that upon fertilisation can give rise to a descendant organism

Somatic Cells: all the other cells of the body

i.e. somatic gene therapyis a treatment aiming atsomatic cells and conse-quently does not lead to a hereditary transmission of the genetic alteration

Ergo transformation of

germ line cells is avoided, to exclude risk of erratic mutations due to insertional mutagenesis

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 15: Sandro Rusconi (09.03.52)

When/where/ may be SGT (currently) indicated?When/where/ may be SGT (currently) indicated?

No existing cure or treatment most monogenic diseases

Side effects and limitations of protein injection interleukin 12 (cancer)

-> toxic effects and rapid degradation VEGF (ischemias)

-> angiomas Factor VIII or IV (hemophilia)

-> insufficient basal level

Complement to conventional increases specificity of conventional therapy (cancer) increases efficacy of conventional therapy (hemophilia)

Life quality burden of patient costs of enzyme therapy (ex. ADA) burden of daily injections (ex. Insulin)

Ergo: there are many indications

for SGT as stand-alone or as complementary therapy

Perfid deviation dreams (with current technologyI:

gene-based sports doping performance amelioration cosmetics

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 16: Sandro Rusconi (09.03.52)

SGT's four fundamental questions & playersSGT's four fundamental questions & players

Efficiency of gene transfer

Specificity of gene transfer

Persistence of gene transfer

Toxicity of gene transfer

The variables which disease? which gene? which vector? which target organ? which type of delivery?

UNIFRRusconi

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UNIFRRusconi

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Page 17: Sandro Rusconi (09.03.52)

UNIFRRusconi

2005

UNIFRRusconi

2005Pharmacological considerations for DNA transferPharmacological considerations for DNA transfer

OHOH

O

OHOH

O

O

OHOH

O

O

Mw 50- 500 Daltons Synthetically prepared Rapid diffusion/action Oral delivery possible Cellular delivery:

- act at cell surface- permeate cell membrane- imported through channels

Can be delivered as soluble moleculesÅngstrom/nm size

rapidly reversible treatment

Classical Drugs

Mw 20 ’000- 100 ’000 Da Biologically prepared Slower diffusion/action Oral delivery not possible Cellular delivery:

- act extracellularly

Can be delivered as soluble moleculesnm size

rapidly reversible treatment

Protein Drugs

Mw N x 1’000’000 Da Biologically prepared Slow diffusion Oral delivery inconceivable Cellular delivery:

- no membrane translocation - no nuclear translocation- no biological import

Must be delivered as complex carrier particles50-200 nm size

slowly or not reversible

Nucleic Acids

Therapy with nucleic acids requires particulated formulation is much more complex than previous drug deliveries has a different degree of reversibility (intrinsic dosage / titration problem)

Page 18: Sandro Rusconi (09.03.52)

THREE classes of anatomical gene deliveryTHREE classes of anatomical gene delivery

Ex-vivo In-vivotopical delivery

In-vivosystemic delivery

V

Examples:- bone marrow- liver cells- skin cells

Examples:- brain- muscle- eye- joints- tumors

Examples:- intravenous- intra-arterial- intra-peritoneal

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 19: Sandro Rusconi (09.03.52)

TWO classes of gene transfer vectors: non-viral & viral delivery

TWO classes of gene transfer vectors: non-viral & viral delivery

a

b

Non-viral transfer(transfection of plasmids)

Viral gene transfer(Infection by r-vectors)

Nuclear envelope barrier! see, Nature BiotechDecember 2001

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 20: Sandro Rusconi (09.03.52)

Transfection versus InfectionTransfection versus Infection

Transfection

Infection

exposed to106 particles/cell12 hours

exposed to 1 particle/cell30 min

Ergo virally mediated gene transfer is millions of times more efficent than nonviral

transfer (when calculated in terms of transfer/particle)

UNIFRRusconi

2005

UNIFRRusconi

2005

Page 21: Sandro Rusconi (09.03.52)

Comparing relevant issues in the two main 'vectorology' sectors (viral versus nonviral)

Comparing relevant issues in the two main 'vectorology' sectors (viral versus nonviral)

Viral vectors Packaging capacity from 4 to 30 kb problem for

some large genes (ex. dystrophin gene or CFTR gene)

important toxic load: ratio infectious/non-infectious particles from 1/10 to 1/100

strong immunogenicity: capsid and envelope proteins, residual viral genes

contaminants: replication-competent viruses (ex. wild type revertant viruses)

Viral amount (titre) obtainable with recombinants (ex. 10exp5 = poor, 10exp10=excellent)

Complexity of manufacturing (existence or not of packaging cell systems) ('MAD' !)

Emotional problems linked to pathogenicity of donor vectors (ex. lentiviruses)

Nonviral vectors Packaging capacity not an issue, even very large

constructs can be used (example entire loci up to 150 kb) minor toxic load: small percentage of non relevant

adventitious materials moderate immunogenicity: methylation status of DNA

(example CpG motifs) contaminants: adventitious pathogens from poor DNA

purification (ex endotoxins) Amount of DNA molecules is usually not a problem, the

other components depends on chemical synthesis No particular complexity, except for specially formulated

liposomes no particular emotional problems linked to the nature of

the reagents

Ergo problems that must be solved to be suitable for clinical treatment and for

manufacturing are different between viral and non-viral vectors when ignoring thir low efficiency, nonviral vectors appears largely superior

UNIFRRusconi

2005

UNIFRRusconi

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Page 22: Sandro Rusconi (09.03.52)

Short list of popular vectors/methodsShort list of popular vectors/methods

r-Adenovirus

r-Adeno-associated V.

r-Retrovirus (incl. HIV)

Naked DNA

Liposomes & Co.

Oligonucleotides

UNIFRRusconi

2005

UNIFRRusconi

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Page 23: Sandro Rusconi (09.03.52)

Recombinant AdenovirusesRecombinant AdenovirusesUNIFRRusconi2005

UNIFRRusconi2005

Manufacturing

Generation I/ II

Generation III

Hybrid adenos: Adeno-RV Adeno-AAV Adeno-Transposase

Examples OTC deficiency (clin, ---) Cystic Fibrosis (clin, --- ) Oncolytic viruses (clin, +++)

Advantages / Limitations

8 Kb capacity Generation I / II>30 Kb capacity Generation IIIAdeno can be grown at very high titers,However Do not integrate in host genome

Can contain RCAs

Are toxic /immunogenic

Page 24: Sandro Rusconi (09.03.52)

Recombiant Adeno-associated-virus (AAV)Recombiant Adeno-associated-virus (AAV)

Examples Hemophilia A (clin, animal, +++(autoimm?) Gaucher (clin, animal, +++) Brain Ischemia (animal, +++) Cystic fibrosis (animal, +/-) retinopathy (animal (+/-)

Advantages / Limitations

Persistence in the genome permits long-term expression, high titers are easilyobtained, immunogenicity is very low,However the major problems are: insertional mutagenesis Promotes autoimmunity? Small capacity (<4.5 kb) which does

not allow to accommodate large genes or gene clusters.

Manufacturing

Helper-dependent production

Helper independent production

Cis-complementing vectors

Co-infection

UNIFRRusconi2005

UNIFRRusconi2005

Page 25: Sandro Rusconi (09.03.52)

Recombinant retroviruses (incl. HIV)Recombinant retroviruses (incl. HIV)

Manufacturing

Murine Retroviruses

VSV-pseudotyped RV

Lentiviruses !

Self-inactivating RV

Combination viruses

Examples SCID (IL2R defect, Paris) (clin, +++) Adenosine Deaminase deficiency (clin, +++!!!) Parkinson (preclin, +++) Anti cancer (clin +/-)

Advantages / Limitations

9 Kb capacity + integration throughtransposition also in quiescent cells(HIV), permit in principle long-termtreatments, however disturbed by: Insertional mutagenesis

Gene silencing

High mutation rate

Low titer of production

UNIFRRusconi2005

UNIFRRusconi2005

Page 26: Sandro Rusconi (09.03.52)

Naked or complexed DNANaked or complexed DNA

Approaches

Naked DNA injection /biolistic

Naked DNA + pressure

Naked DNA + electroporation

Liposomal formulations

Combinations

Advantages / Limitations

Unlimited size capacity + lowerimmunogenicity and lower bio-riskof non viral formulations isdisturbed by

Low efficiency of gene transfer

Even lower stable integration

Examples Critical limb Ischemia (clin, +++) Cardiac Ischemia (clin, +/-) Vaccination (clin, +/-) Anti restenosis (preclin. +/-)

UNIFRRusconi2005

UNIFRRusconi2005

Page 27: Sandro Rusconi (09.03.52)

OligonucleotidesOligonucleotides

Approaches

Antisense

Ribozymes/DNAzymes

Triple helix

Decoy / competitors

Gene-correcting oligos √ !

Advantages / Limitations

these procedures may be suitable for :

handling dominant defects

transient treatments (gene modulation)

permanent treatments (gene correction)

Examples Anti cancer (clin,preclin., +/-) Restenosis (clin, +++) Muscular Distrophy (animal, +++)

UNIFRRusconi2005

UNIFRRusconi2005

Page 28: Sandro Rusconi (09.03.52)

Recap: current limitations of popular vectorsRecap: current limitations of popular vectors

r-Adenovirus- no persistence- limited packaging- toxicity, immunogenicity

Biolistic bombardmentor local direct injection- limited area

Electroporation- limited organ access

Liposomes, gene correction & Co.- rather inefficient transfer

General- low transfer efficiency- no or little genomic integration

Solutions:- improved liposomes with viral properties (“Virosomes”)

UNIFRRusconi

2004

UNIFRRusconi

2004

r-AAV- no integration in host g.- very limited packaging- autoimmunity?

r-Retrovirus (incl. HIV) - limited packaging- random insertion- unstable genome

General- antibody response- limited packaging- gene silencing- Manufacturing limitations

Solutions:- synthetic viruses (“Virosomes”)

Ergo the future will probably see an

increasing interest in viral-like, but artificial particles

Page 29: Sandro Rusconi (09.03.52)

Rapid and transient action required

Adeno II, Plasmid, modulatory oligonucleotides

Trauma or infection(Ischemia, fracture, burn, wound, acute infection, anaphyllaxis)

rapid & transient expression of cytotoxic or immunomodulators

Adeno II, Plasmid, oncolytic recombinant viruses

Solid tumors +/- metastat.(cervical, breast, brain, skin)

No rapid expression necessary, persistence required, low toxicity

AAV, nonviral, LentiLocal chronic or progressive (ex. CNS, joints, eyes)

Justifications /IssuesMost 'suitable' vector

persistence of expression of the transferred gene, minimize readministration

Chronic Metabolic (ex. OTC, Gaucher, Haemophilia, hematopoietic)

AAV, Lenti, Adeno III, r-retroviruses, repair oligo

Which vector for which disease categoryWhich vector for which disease category

Disease Type

UNIFRRusconi

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UNIFRRusconi

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Page 30: Sandro Rusconi (09.03.52)

Technologies related to-, but not all genuinely definable as 'gene therapy'

Technologies related to-, but not all genuinely definable as 'gene therapy'

Transiently bioactive oligonucleotides antisense decoy dsDNA, decoy RNA ribozymes DNAzymes Si RNA oligonucleotides

Oncolytic viruses ONYX-15, ONYX-638 (r-adeno) r-HSV r-FSV Implants of encapsulated cells

neurotrophic factor producer cell implants hormone-producing cells

UNIFRRusconi

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UNIFRRusconi

2005

from www.nature.com

Genuine gene therapy oligos chimeroplasts (*gene correction induction)

Ergo among all these, SiRNA

seems to be the most promising inhibitor factor, and can be permanently expressed from DNA vectors

Page 31: Sandro Rusconi (09.03.52)

Cardiac ischaemia(Heart)

VEGF gee (vascular growth

factor), plasmid, intracardiac

2000 J. Isner

Limb ischaemia(Hands, Feet)

VEGF gene (vascular growth

factor), plasmid, intramuscular

1998 J. Isner

'Classical' SGT models and strategies'Classical' SGT models and strategies

SCID(Immunodeficiency)

IL2R gene (gamma-C receptor)

retrov., ex vivo BM

2000 A. Fischer2002, UK trials

Haemophilia B(Blood)

Factor IX gene (clotting factor),

aav, adenoIII, intramuscular

1999-2000 M. Kay, K. High

Cystic Fibrosis(Lung, Pancreas)

CFTR gene (chlorine transpor-

ter), retrov., aav, adenoII, local

no significant resultsin spite of several trials

ADA deficiency(Immunodeficiency)

ADA normal gene (enzyme)

retrovirus, ex-vivo BM

1990 F. Anderson, 2002 C. Bordignon

Disease transferred function Clinical Results

additional 'popular' and emerging examples:Morbus Gaucher, Morbus Parkinson, Crigler Njiar, OTC deficiency, Duchenne's MD, Restenosis control

UNIFRRusconi

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UNIFRRusconi

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Page 32: Sandro Rusconi (09.03.52)

Gene Therapy in the clinics: Trials Worldwide (cumulative)

Gene Therapy in the clinics: Trials Worldwide (cumulative)

cancer

hered.

Infect.vasc.

40

60

100

20

80

trials

500

1500

1000

patients

1992 1994 1996 19981990 2000

21% overall still pending or not yet Initiated !www.wiley.com/genetherapy

66% phase I19% phase I-II13% phase II0.8% phase II-III1.7% phase III

As of Jan 2005:938 cumulative protocols (90-2004)4600 treated /enrolled patients

Ergo in spite of 13 year- research only

less than 2% of the trials has reached phase III

not necessarily due to the «novel»'fail early, fail fast' paradigm

II-II

II

UNIFRRusconi

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UNIFRRusconi

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! As of Jan 1, 2004:1 approved product in China (Gendicine, by Sibiono Inc. 2004

Page 33: Sandro Rusconi (09.03.52)

Gene Therapy Clinical and Preclinical MilestonesGene Therapy Clinical and Preclinical Milestones

1990, 1993, 2000, 2004 // ADA deficiencyF Anderson, M Blaese // C Bordignon

Anderson, 1990

Bordignon, 2000 (ESGT, Stockholm)2002, science 296, 2410 ff)

1997, 2000, Critical limb ischemiaJ Isner († 4.11.2001), I Baumgartner, Circulation 1998

Isner, 1998

1998, RestenosisV Dzau, HGT 1998

Dzau, 1999

2000, HemophiliaM Kay, K High

2000, 2002, X-SCIDA Fischer, Science April 2000, UK trials 2003

Fischer, 20002002

2001, 2003 ONYX oncolytic VirusesD Kirn (Cancer Gene Ther 9, p 979-86)

Kirn, 2000,200120022003

Intravascular adenoviral agents in cancer patients:

Lessons from clinical trials(review)

2004, Chronic Granulomatous DiseaseM Grez Frankfurt; R Seger Zürich

Manuel GrezHans Peter HossleReinhard Seger2004

very encouraging data from just initiated clinical trial,prospected >10 patients

UNIFRRusconi

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UNIFRRusconi

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Approved commercialisation of Gendicine (Jan 2004) for cancer treatment in China

SibionoShenzen

2004, Gendicine (adeno-p53 vector)L Peng, Sibiono Inc, Shenzen, China

21 lives saved 21 lives were so far documentedly saved by GT in european trials (x-SCID, ADA, CGD) (France, UK, Italy) (all in phase I)~200 lives quality-improved in several other phase I and II trial~xxx lives saved or quality-improved ?by Gendicine (still undocumented)

Page 34: Sandro Rusconi (09.03.52)

Two persisting major SGT frustration casesTwo persisting major SGT frustration cases

Muscular dystrophy (incidence 1: 3000 newborn males)

requires persistence of expression extremely large gene (14 kb transcript, 2 megaBP gene unclear whether regulation necessary unclear at which point disease is irreversible

Cystic fibrosis (incidence 1: 2500 newborns)

most luminal attempts failed because of anatomical / biochemical barrier: no receptors, mucus layer

large gene that requires probably regulation requires long term regulation unclear at which point disease becomes irreversible

In spite of genes discovered in the 90ties:

lacking suitable vector no satisfactory delivery

method no persistence treatment too late

UNIFRRusconi

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UNIFRRusconi

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Page 35: Sandro Rusconi (09.03.52)

The most feared potential side-effects of gene transferThe most feared potential side-effects of gene transfer

Immune response to vector

immune response or long term side effects from

new or foreign gene product

General toxicity of viral vectors

Adventitious contaminants in recombinant viruses

Random integration in genome

-> insertional mutagenesis (-> cancer risk)

Contamination of germ line cells

Random integration in genome

-> insertional mutagenesis (-> cancer risk)

Ergo«The more effective is a drug, the more side effects

it will generate». SGT enjoyed a side-effect-free illusion during its

first 10-year of non-working early period Many side effects are still related to the rather

primitive state of the vectorology/delivery

UNIFRRusconi

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UNIFRRusconi

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immune response or long term side effects from

new or foreign gene product -> autoimmunity

Page 36: Sandro Rusconi (09.03.52)

Paris, Jan 24, 2005, A Fischer: retrovirus X-SCID (bone marrow) same cohorta third patient developed a similar leukemia what will happen?

Paris, Jan 14, 2003, A Fischer: retrovirus X-SCID (bone marrow) same cohorta second patient developed a similar leukemia 30 trials in USA were temporarily suspended

Paris, Oct 2, 2002, A Fischer: retrovirus , x-SCID (bone marrow) one patient developed a leukemia-like condition.Trial suspended and some trials in US and Germany on hold until 2003.

UPenn, Sept. 19, 1999, J. Wilson: adenovirus , OTC deficiency (liver) one patient (Jesse Gelsinger) died of a severe septic shock. Many trials were put on hold for several months (years).

SAEs1: best documented cases: acute and long term SAEs: from Gelsingers' death to Paris' Leukaemias caused by insertional mutagenesis

SAEs1: best documented cases: acute and long term SAEs: from Gelsingers' death to Paris' Leukaemias caused by insertional mutagenesis

NY May 5, 1995, R. Crystal: adenovirus, cystic fibrosis (lung) one patient mild pneumonia-like conditionTrial interrupted and many others on hold.

UNIFRRusconi

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UNIFRRusconi

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Ergogene therapy can produce both short-term and long-term severe side effects through acute immunogenicity or insertional mutagenesis (cancer risk)

Most Recent Paris' Trial Newsdiscussed at:

www.unifr.ch/nfp37/adverse03.html

it is now rather established (2004) that the Paris' leukaemia events were caused by

treatment-specific circumstances (type of transferred gene, dosing, type of vector,

predisposition)The third SAE might delay the nextly

planned restart of patients recruitment

Page 37: Sandro Rusconi (09.03.52)

Future solutions to insertional mutagenesis: targeted gene transfer approaches

Future solutions to insertional mutagenesis: targeted gene transfer approaches

Random integrating vectors r-retroviruses r-lentiviruses r-AAV plasmids (low frequency) plasmids + transposase (eg 'sleeping beauty')

Transient, non integrating vectors adenovirus plasmid RNA virus based oligonucleotides (SiRNA, antisense, ribozymes) artificial chromosomes

Gene correction vectors chimeroplasts (RNA-DNA chimeric oligos) single stranded DNA (homologous recom)

Ergo genotoxic non-genotoxic

Specifically integrating vectors hybrid vectors (HSV-AAV) Phage 31 integrase-based designer integrases (ZnFinger proteins)

UNIFRRusconi

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UNIFRRusconi

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Ergovector systems that allow specific or at least better location-controlled gene delivery are experimentally well advanced (see accompanying text)

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- Chenuaud and colleagues (page 3303)- Gao and colleagues (page 3300)inadvertent autoimmune response in nonhuman primates resulting from transfer of a gene encoding a self-antigen.- delivered the homologous EPO cDNA driven by ubiquitous and/or regulatable promoters via AAV vectors injected in muscle or aerosolized in lung, resulting in supra-physiologic serum levels of EPO, from 10- to 100 000- fold over the baseline

SAEs2: mid-term effects: Recent Autoimmunity Reports

SAEs2: mid-term effects: Recent Autoimmunity Reports

Blood, 1 May 2004, Vol. 103, No. 9, pp. 3248-3249Autoimmunity in EPO gene transfer (macaques)Els Verhoeyen and François-Loïc Cosset

UNIFRRusconi

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UNIFRRusconi

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K High, ASGT June meeting 2004[Abstract1002] Immune Responses to AAV and to Factor IX in a Phase I Study of AAV-Mediated, Liver-DirectedGene Transfer for Hemophilia B

Ergosomatic gene transfer can generate mid-term self immunity under inappropriate circumstances

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SAEs3: Non-science factors that have disturbed the public perception and progress of gene therapy

SAEs3: Non-science factors that have disturbed the public perception and progress of gene therapy

'Naive' statements in the early 90ties

Excess of speculative financing in mid-late 90ties.

Concomitance with stock-market euphoria

Reckless statements/promises or misreporting in late 90ties

Tendency by the media to spectacularise good and/or bad news

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Ergo Money and media: an explosive cocktail, just like for sports or

arts,... the field tends to degenerate as soon as excessive financial speculations are involved and when the mass media become overly interested in it.

The fundamental error: we pretended making a business issue out of a scientific issue

UNIFRRusconi

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UNIFRRusconi

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Ups and Downs of Gene Therapy: a true roller-coaster ride!

Ups and Downs of Gene Therapy: a true roller-coaster ride!

high

Low

moo

d

NIHMotulskireport

Lentivectors

Adeno III

J. Isner

F Anderson

R. Crystal

Adeno I

A. FischerM. Kay

AAV germline in mice?

Ergo whenever a reasonable cruise

speed was achieved, a major adverse event has brought us back «square one» or even below

V.Dzau

Paris I and IILeukaemias

J. Gelsinger

90 91 92 93 94 95 96 97 98 99 00 01 02 03 04

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UNIFRRusconi

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05

C Bordignon

promisingresults

2003-2004

Auto-immunity

lentivectorsin clinics?

?

?

?

Paris III

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Conclusions 1: in spite of the many hurdles, GT has already saved >20 condemned lives and keeps producing positive signals

Conclusions 1: in spite of the many hurdles, GT has already saved >20 condemned lives and keeps producing positive signals

X- SCID trials France: 9/10 patients permanently cured of the lethal

disease X-SCID UK: 6/6 patients cured of X-SCID lethal condition

Ergo gene therapy's principle works we better know limitations and

potential of individualvectors

ADA deficiency C Bordignon trials 4/4 patients permanently corrected +

detoxified

Others significant amelioration of CLI condition in Phase II trials important therapeutic benefit with oncolytic viruses promising amelioration in hemophilia patients promising results from Chronic Granulomatosis treatment First gene medicine product registered in China by

Sibiono Inc. (see www.unifr.ch/sibiono.html)

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UNIFRRusconi

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Conclusions 2: GT has proven several concepts, has several tools, but is still in the pioneering phase

Conclusions 2: GT has proven several concepts, has several tools, but is still in the pioneering phase

Fundamentally many new potentially therapeutic genes identified All types of diseases can be virtually treated by gene

transfer we start to manage efficiency, specificity, persistence and

toxicity

Vectors and models Choice of among a number of viral and non viral vectors Viral vectors have the advantage of efficiency nonviral vector the advantage of lower toxicity/danger. Viral vectors have the disadvantage of limited packaging

and some toxicity nonviral vectors have the major disadvantage of low

efficiency of transfer

Clinically over 900 trials and >4000 patients in 14 years only a handful of trials is now reaching phase III Progress further slowed down by periodical pitfalls

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Ergo we are somewhat ahead but still

in the pioneering phase !

«failure of evidence» does not mean «evidence of failure» !

UNIFRRusconi

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UNIFRRusconi

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Perspectives: somatic gene therapy will progress in spite of all past, present and future incidents/accidents

Perspectives: somatic gene therapy will progress in spite of all past, present and future incidents/accidents

Fundamental level & vectorology

Better understanding of gene interactions and networking Gene inhibition through Si RNA specifically integrating gene constructs artificial chromosomes become more realistic

Preclinically scaling up to larger animal models (dog and monkey) new transgenic models may give improved similarities to

human diseases

Clinically Use of recombinant lentiviruses Increase of Phase III procedures over the next 5 years First therapeutical applications may be registered within

3-5 years challenge by other emerging therapies

QuickTime™ et un décompresseurCinepak Codec von Radius[32] sont requis pour visualisercette image.

QuickTime™ et un décompresseurCinepak sont requis pour visualiser

cette image.

Ergo many adverse events were due rather

to human errors than to intrinsic dangers

other undesired effects are due to prototypic state of tools

hurdles can be overcome the genuine potential of SGT is intact

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UNIFRRusconi

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Page 44: Sandro Rusconi (09.03.52)

Thank you all for the attention,

[email protected]

or visit:

www.unifr.ch/nfp37/

...Thanks, and let's remain optimistic...Thanks, and let's remain optimistic

Swiss National Research Foundation

Fritz Bühler, Annette Mollet

ECPM education program

QuickTime™ et un décompresseurSorenson Video sont requis pour visualisercette image.

QuickTime™ et un décompresseurCinepak sont requis pour visualiser

cette image.

QuickTime™ et un décompresseurCinepak sont requis pour visualiser

cette image.

QuickTime™ et un décompresseurSorenson Video sont requis pour visualiser

cette image.

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UNIFRRusconi

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Page 45: Sandro Rusconi (09.03.52)

That's all, folks!That's all, folks!

QuickTime™ et un décompresseurSorenson Video sont requis pour visualiser

cette image.

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www.unifr.ch/nfp37

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UNIFRRusconi

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UNIFRRusconi

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Page 47: Sandro Rusconi (09.03.52)

Discussion: Recap: what is a virus ? -> A superbly efficient replicating nanomachine

Discussion: Recap: what is a virus ? -> A superbly efficient replicating nanomachine

UUNIFR

Rusconi

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UUNIFR

Rusconi

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E L1 L2

standard viral genome

100 nm

replication

entry disassemblydocking genome replication

late genes exp

assembly

capsid

E L1 L2

Spread

Etc...

early genes exp

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Discussion: Engineering of replication-defective, recombinant viruses (Principle)

Discussion: Engineering of replication-defective, recombinant viruses (Principle)

UNIFR

Rusconi

2002

UNIFR

Rusconi

2002

E L1 L2 rprp

Wild type genome Normal target cells Virions

Recombinant genome R-Virions

E E E

EE

EE

Packaging cells

Normal target cells

X

PackagingPackagingPackaging

Page 49: Sandro Rusconi (09.03.52)

Discussion: The Paris' trial (see also www.unifr.ch/nfp37/adverse.html)

Discussion: The Paris' trial (see also www.unifr.ch/nfp37/adverse.html)

UNIFRRusconi2003

UNIFRRusconi2003

Disease deficiency of the receptor gamma(c) incapacity of maturing lymphocytes severe combined immunodeficiency lethal at 4 months if untreated survival 10 years under sterile conditions

Gene Therapeutical approach explant BM (3-6 month old) select CD34+/CD38- transduce with retroviral vector encoding gamma(c) re-infusion, follow-up

Conventional treatments maintenance under sterile condition treatment with antibiotics transplant of HLA-matching bone marrow

Page 50: Sandro Rusconi (09.03.52)

Discussion: The Paris' odyssey(see also www.unifr.ch/nfp37/adverse.html)

Discussion: The Paris' odyssey(see also www.unifr.ch/nfp37/adverse.html)

UNIFRRusconi2005

UNIFRRusconi2005

Chronology 1998 A Fischer's team starts treatment of patients 2000 publication results first 2 patients 2001/2002 publication further 8 patients: 9 out of 10 responded well,

back home, normal life

Adverse 1 summer 2002, high WBC in a 36 months patient september 2002, hyper-proliferatory cells with insertion in proximity of LMO2 oncogene, October 2003, public disclosure, chemotherapy, good response, report at ESGT congress. October 2003 3 US and 3 EU trials on hold

Adverse 2 december 2002, T cell hyper-proliferation in a second, 36 months patient

hyper-proliferatory cells also contain insertion of transgene close to LMO2 gene January 2003, notification to authorities, public disclosure, treatment chemotherapy January 2003, 27 US and 5 EU trials on hold

Adverse 3 January 2005, T cell hyper-proliferation in a third, ~36 months patient Fischer's trial is again on hold

Page 51: Sandro Rusconi (09.03.52)

Discussion: Questions & hypotheses from the Paris' Trial(see also www.unifr.ch/nfp37/adverse.html)

Discussion: Questions & hypotheses from the Paris' Trial(see also www.unifr.ch/nfp37/adverse.html)

UNIFRRusconi2005

UNIFRRusconi2005

Facts in both patients insertion of the transgene in proximity of LMO2 this type of insertion not found in CD34+ cells in these patients LMO2 expression is apparently increased in these patients LMO2 gene already known as proto-oncogene involved in

some chromosomal-translocations found in some leukaemias gamma(c) receptor can respond to IL-2, IL-5, IL-7, IL-9, IL-15,

Il-21 and ... gamma(c) receptor is therefore itself a pro-proliferatory and

anti-apoptotic signaling molecule

answers early 2005yesyesyesno

Questions/hypotheses is this adverse event specific for the disease status? is the transgene contributing to the hyper-proliferatory potential? is the gamma(c) synergising with LMO2? Has there been such an adverse event in the over 20 retrovirally

transduced patients treated so far for other diseases?

Page 52: Sandro Rusconi (09.03.52)

Discussion: Examples of gene transfer treatments against cancer

Discussion: Examples of gene transfer treatments against cancer

UNIFRRusconi2002

UNIFRRusconi2002

percentage of trials(therapeutic potential)

Directly cytotoxic Prodrug activation Tumor-specific cytotoxic expression

38% of protocols(strong complementary effect, possible relapse)

Immunostimulatory Transfer of Immuno-attracting functions Instruction of immune cells

31% of protocols(very strong potential, low relapse chances)

Immunoprotective Transfer chemoresistance genes in

immune cells

5 % of protocols(very limited application, laborious, not widely explored)

Tumor modulation Restore tumor-suppressor functions down-regulate pro-oncogenic functions

26 % of protocols(good effect but low bystander and likely relapse)

Type of treatment examples

Page 53: Sandro Rusconi (09.03.52)

Discussion: Why so many cancer trials?Discussion: Why so many cancer trials?UNIFRRusconi2002

UNIFRRusconi2002

Better benfit/risk balance and high emotional acceptance (terminal patients, ethical committees)

Market potential higher than monogenic diseases (most thereof being orphan diseases)

Many more diversified approaches envisageable than in monogenic diseases

Much higher number of patients/center than in monogenic diseases

Page 54: Sandro Rusconi (09.03.52)

Discussion: An effective cancer molecular treatment:Oncolytic viruses on the example of ONYX-015

Discussion: An effective cancer molecular treatment:Oncolytic viruses on the example of ONYX-015

A) Normal Adenovirus can propagate in virtually all cells

B) ONYX-015 deleted E1B function can propagate efficiently only in P53 -deficient cells (e.g. most cancer cells)

Clinical success Head & Neck Cancer

Awaiting for further successes (currently in Phase II and III)

expected to be useful in combination with conventional therapy

ADVANTAGE: the 'drug' has its own dynamics

DISADVANTAGE: danger of evolving viruses unclear if it works in adeno-immune

patients unclear if if works in immuno-

compromised patients (chemotherapy)

UNIFRRusconi2002

UNIFRRusconi2002

Page 55: Sandro Rusconi (09.03.52)

TitleTitleUNIFRRusconi

2004

UNIFRRusconi

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text text

Ergo txt