scaffold degradation effects on eukaryotes science... · survivorship. limitations • only yeast...
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Scaffold Degradation Effects on Eukaryotes
Sam PattonGrade 9
Central Catholic High School
Scaffold Degradation
• Scaffold – a frame used for supporting a larger structure. In tissue engineering, a temporary, biodegradable frame for supporting tissues
Replacing damaged or diseased tissue with healthy tissue, specific for the needs of each individual patient
What is Tissue Engineering?
Spinal Cord
Jaw
Limb
The Ultimate Goal of Tissue Engineering is
Complete Tissue Regeneration of the Any
Body Part Heart
Stomach
Liver
Matrix Culture Implant
Cells can be taken from the patient, more reliable this
way due to cell recognition
How Tissue Repair Works
Scaffold Degradation• If the scaffold has unwanted effects on any internal
organs or the blood stream, then the patient may regress
Scaffold Degradation
• PVA Scaffolds are natural scaffolds made with polyvinyl alcohol, so that they have little effect on the body
Polyvinyl Alcohol
• Natural polymer made from polyvinyl acetate, highly soluble in water, assumed to not harm people
Yeast• Saccharomyces cerevisiae, a commonly used
model, similar to human epithelial cells in biochemistry
Saccharomycescerevisiae
Purpose
• To test the effects of PVA degradation products on
yeast survivorship
Hypotheses
• Null Hypothesis –• The Biodegraded PVA scaffolds will not have a
significant effect on the growth of yeast colonies
• Alternative Hypothesis -The Biodegraded PVA Scaffolds will have a
significant effect on the growth of yeast colonies.
Materials• Stirrer bars• Test tubes• 24 YEPD agar plates
(1% yeast extract, 2% peptone, 2% glucose (dextrose), 1.5% agar)
• LB media (0.5% yeast extract, 1% tryptone, 1% sodium chloride)
• PVA Scaffolds• Vortex
• Pipets• Large flasks
and beakers• Distilled water• Incubator• Electronic
metric scale• Ethanol
Create Scaffolds Procedure1. The PVA Scaffold was cut up so that it
weighed exactly one gram.2. The one gram was cut into very small pieces.3. The pieces were put into a 50mL conical tube
with 9mL of sterile water4. It was incubated until the scaffold had
degraded.5. The mixture was sterilized by adding ethanol to make a 5% sterilized scaffold
mixture (the mixture wouldn't go through a sterile filter)
Concentrations of Scaffold Chart
Column1 Column2 Column3 Column4 Column5
Sterile Water 9.9mL 9.88mL 9.7mL 7.9mL
5% Degraded Scaffold Mixture 0mL 20uL .2mL 2mL
Yeast 0.1mL 0.1mL 0.1mL 0.1mL
Total Volume 10mL 10mL 10mL 10mL
Concentration 0% 0.01% 0.10% 1%
Creating and Culturing the Plates Procedure
1. 100uL aliquots from each tube pipetted onto YEPD agar plates
2. The plates were incubated for 48 hours at 30 degrees Celsius
3. The resulting colonies were visually counted, each colony was assumed to have arisen from one cell
P-Value: 0.39
020406080
100120140160
Control 0.01% 0.10% 1% 0%
Num
ber o
f Col
onie
s
Concentration of Scaffolds
PVA Scaffold Effects on Yeast Survivorship
P
Conclusion
• The null hypothesis was accepted, suggesting that the degradation of PVA scaffolds does not affect yeast
survivorship
Limitations• Only yeast was used, not
other specimens• Only PVA scaffolds were
used, not any others, such as TCP or PGLA
• Spread plating was not synchronized (human error)
• Ethanol for sterilization may have killed some yeast
• Only one exposure time and one type of exposure
• Other scaffolds other than PVA, such as PGLA and TCP
• Use different models (E. coli, staph, etc.)
• More concentrations and replicates
• Varied exposure times and types of exposures
• Synergistic effects
Extensions
References• http://redstaryeast.com/science-yeast/yeast-
experiments/• http://study.com/academy/lesson/extracellular-matrix-
function-components-definition.html• http://www.ncbi.nlm.nih.gov/pubmed/23565688• http://www.britannica.com/science/polyvinyl-alcohol
Anova