signal transduction.pdf

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1  S ignal Transduct ion I S igna l tr ans d uc ti o n is jus t that. T he ma nner by whic h c ells trans mit c hemic a l s igna ls that ini ti a te a p lethor a o f bioc hemica l a nd c ell ul ar events . How muc h of thi s is known? S ur pris ingly little. A n umbe r o f int r a c ellular mess eng ers ha ve b een defined but unlike the meta b olis ms we ’ve s tudied thus far ther e is grea t vari a ti on a nd muc h more to b e defined. S o why do c ell s need to c ommuni cate ? -Coordination of movement bacterial movement towards a chemical gradient green algae - co lonies swimmi ng thr ough the wa ter - Coo r dination o f metab oli s m - i ns ul in gl uc ag on e ffec ts on me tab olis m -C oo r dination of growth - wound he aling, s ki n. blood a nd g ut ce ll s  T hr ee b asi c type s of in ter c ell ul ar s ignali ng I - intracellu lar s ignal via ga p junctions tight junctions that form a cytoplasmic bridge between cells a ll ows the s igna li ng mo lec ules to b e trans ferr ed dir ec tl y be twee n c ells II - S ec r eted ext r ac ell ular mes s eng er one cell “talking” to another ex. insul in gluca go n, growth fa ctors III - Anchored ext ra c ellular messeng er s i gna li ng o c c urs be tween c ell s in phys i c al c ontact tr ansforming growth fac tor Hor mones are c hemica l s ignals that r eac h their target via the b lood strea m. 1. Ever y differ ent hormone b in ds t o a specific receptor and in bin ding a signi fi c ant alteration in receptor conformation results in a biochemical response inside the cell 2.  T his ca n be tho ught of a s a n all ost eri c mod ifi ca ti on with two d is ti nct conformations; bound and free. 3.  T he binding o f t he ho r mone lea ds to a tr ans duc ti on o f t he hormone signal into a biochemical response. 4 . Hormone receptors are proteins and are typically classified as a cell surface rec ep tor or an int r ac ell ul ar r ec ep tor . Eac h have differ ent r oles and ver y diff erent means of r eg ul ating bioc hemi c al / c ell ul ar fun c ti on. Int rac ell ular H ormone R ec ep tor s  T he s ter oid/ thy r oid hormone r ec ep tor s upe r famil y (e.g. gluc oc ort ico id, vi tamin D, retinoic acid and thyroid hormone receptors) is a class of proteins that reside in the c yt oplasm and bind the lipophilic s ter oid/ thy r oid hormones . T hese hormones are c apa ble of freely penetrating the hydrophobic plasma membrane. Upon binding ligand the hormone-r ec ep tor comp lex tr ansl oc a tes to the nuc leus and bind to spec if ic DNA sequences termed hormone response elements. The binding of the complex to an these DNA elements results in altered transcription rates of the associated gene. C ell s ur fac e rec ep tors  T he c ell s ur fac e rec ep tor s are a gener al class if ica ti on of the pr oteins which s pec if ica ll y bind water soluble h o r mones. T hese rec ep tors a r e very c omp lex and varied . A key

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 Signal Transduction I

Signal transduction is just that. The manner by which cells transmit chemical signals thatinitiate a plethora of biochemica l and cellular events. How much of this is known?Surprisingly little. A number of intracellular messengers have been defined but unlike themetabolisms we’ve studied thus far there is great variation and muc h more to be

defined.

So why do cells need to communicate?

-Coordination of movementbacterial movement towards a chemical gradientgreen algae - co lonies swimming through the water

- Coordination of metabolism - insulin glucagon effects on metabolism-Coordination of growth - wound healing, skin. blood and gut cells

 Three basic types of intercellular signalingI - intracellular signal via gap junctions

tight junctions that form a cytoplasmic bridge between cellsallows the signaling molecules to be transferred direc tly between cells

II - Sec reted extracellular messengerone cell “talking” to anotherex. insulin glucagon, growth factors

III - Anchored extracellular messengersignaling occurs between c ells in physical contacttransforming growth fac tor

Hormones are chemica l signals that reach their target via the blood stream.1.  Every different hormone binds to a specific receptor and in binding a significant

alteration in receptor conformation results in a biochemical response inside thecell

2.   This can be thought of as an allosteric modification with two distinctconformations; bound and free.

3.   The binding of the hormone leads to a transduc tion of the hormone signal into abiochemical response.

4.  Hormone receptors are proteins and are typically classified as a cell surfacereceptor or an intrac ellular receptor. Each have different roles and very differentmeans of regulating biochemical / cellular function.

Intracellular Hormone Rec eptors  The steroid/ thyroid hormone receptor superfamily (e.g. glucoc orticoid, vitamin D,retinoic acid and thyroid hormone receptors) is a class of proteins that reside in the

cytoplasm and bind the lipophilic steroid/ thyroid hormones. These hormones are capableof freely penetrating the hydrophobic plasma membrane. Upon binding ligand thehormone-receptor complex transloc ates to the nucleus and bind to spec ific DNAsequences termed hormone response elements. The binding of the complex to an theseDNA elements results in altered transcription rates of the associated gene.

Cell surface receptors  The cell surfac e receptors are a general classification of the proteins which specificallybind water soluble hormones. These rec eptors are very complex and varied. A key

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component of this class of rec eptors is that they possess at least one transmembranespanning domain. From there all bets are off. The mec hanism of the cell surfac ereceptors varies depending on the type of hormone bound and the second messengersystem involved.

-  Each receptor binds specifically to ONE hormone at the appropriate hormone

concentration.-   The assoc iation of hormone with it’s receptor is defined by the equilibria proc ess

Kd = [R] [L] / [RL] - the dissociation constant. Similar to Km – measures affinity.

-   The effective conc entrations are very low 10-6 to 10-15 M-  Each receptor will have various but distinct second messenger systems associated

with it.-   The specificity of action of an organism to a hormone (tissue and cell type)

depends on which receptors are expressed in each cell and to which signalingpa thway is linked to the receptor.

 There are three phases to a water soluble hormone action1.  hormone or first messenger2.  rec eptor binding and initiation of the sec ond messenger system

3.  amplification and cascade of the second messenger system

1) MessengersFirst messengers - secreted signaling molecules

- Hormones - sec reted from endocrine glands (usually into the b lood stream)effec ts are long distance- Neurotransmitters - signaling molecules released in spec ial regions of the cell andmove ac ross a synaptic cleft in neurons- Local Mediators (paracrine - Greek for besides) similar effect to hormones buteffec t is very short. Signaling between neighboring cells

Structure o f 1st messengers vary greatly - we already know most of them 1) amino acid derivatives

- tyrosine -> thyroid hormones T3/T4, epinephrine, dopamine- glutamate -> histamine- tryptophan -> serotonin

2) Peptides - usually made in pre/ pro format, large families- insulin, glucagon, oxytocin, growth factors

3) Fatty ac ids and ec osanoids - can act as local mediators- TXA, LTE, phosphatidic acid, lysophosphatidic ac id

4) Steroids - cholesterol derivatives- progesterone, estrogen, testosterone

- site of action usually in nucleus w/ DNA binding protein

5) NO Nitric Oxide – small short lived gas molecule – responsible for dilation andViagra

2) Ist messengers elicit cellular response by binding to rec eptors - signal transduction

three general methods of signalingI Ion channel system

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-> binding of ligand (1st messenger) to receptor opens a spec ific ionchannel. The receptor itself may be the ion channel. Often ca lled ligandgated channel. Ion flux leads to a significan biochemical change.

 Typica lly Ca +2 or K +/Na+

II Rec eptors without enzymatic activity (Sec ond messenger systems)

1st messenger binds to receptor and ac tivates production of a newmolecule - heterotrimeric G proteins

III Rec eptors with integral enzymatic activity1st messenger binding activates an enzyme activity in the receptor itself -leads to new proteins interac ting with intracellular portion and a newsecond messenger molecule.

3) Second messengers Third phase of the signal transduc tion c oncept- A second messenger is a molecule produced in response to a 1st messengerbinding to a receptor.- Leads to an amplification of original signal- sec ond messenger may direc tly effect target protein / DNA or mostly leads to a

chain of second messengers with a wide variety of effects-  specific control and response – cAMP-  Many different signaling proteins are involved (thousands). The design of the

proteins organization comprise the signaling pathways

One of the first signaling systems identified was a visual pigment - retinal rod cell -rhodopsin

-  first messenger is light-  receptor is retinal/rhodopsin – a kind of a G protein-  second messenger is cGMP-  Physiologic effec t is the flux of ions -> membrane potential which triggers

neurotransmitter release

G-Protein Coupled Receptors - Seven pass receptors / Heterotrimeric G proteins --  many seven pass rec eptors with unknown number of ligands / hormones-  all receptors act through G proteins

  There are several different classifications of rec eptors that couple signaltransduction to G-proteins. These c lasses of receptor are termed G-protein coupledreceptors, GPCRs. Well over 1000 different GPCRs have been c loned, most beingorphan receptors having no as yet identified ligand.

-   These proteins possess seven transmembrane spanning domains-   The cytosolic side has the N-terminal and is glycosylated-  Binding of hormone to the receptor initiate a twisting of two or more of 

the TM helixes.- 

Ligand (epinephrine) binding takes place within the hydrophobic core, notthe loops. Other agonists (ligands which bind and activate receptors i.e.hormones) act in other ways.

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-  Long term ac tivation / hormone levels leads to the deactivation o f arec eptor in two ways1.   The rec eptor is phosphorylated by protein kinases at the C – terminal

domain. The result is a decrease in the interac tion with the G proteins2.   The receptors are removed (endocytosis) from the cell surfac e and

either the hormone is degraded and the receptor returned or thereceptor is degraded never to be seen again!