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Austin E. Smith Department of Chemistry University of North Carolina at Chapel Hill Chapel Hill, NC 27599 [email protected]
Mailing Address: 256A Sweet Bay Place
Carrboro, NC 27510 (828) 773-6337
Education University of North Carolina at Chapel Hill, Chapel Hill, NC
Ph.D. in Chemistry (expected 2015) Research Advisor: Dr. Gary J. Pielak
08/2010 - present
Furman University, Greenville, SC
M.S. in Chemistry Research Advisor: Dr. Karen L. Buchmueller
06/2009 - 08/2010
Furman University, Greenville, SC
B.S. in Chemistry, Magna cum Laude Cumulative GPA: 3.87
09/2005 - 05/2009
Publications
8. Smith AE, Zhou, Z, Pielak GJ. Hydrogen exchange of disordered proteins in Escherichia coli.
Protein Science, in press (2015). 7. Monteith WB, Cohen RD, Smith AE, Guzman-Cisneros E, Pielak GJ. Quinary structure
modulates protein stability in cells. Proceedings of the National Academy of Sciences of the United States of America, in press (2015).
6. Smith AE, Zhang Z, Pielak GJ, Li C. NMR studies of protein folding and binding in cells and
cell-like environments. Current Opinion in Structural Biology, 30: 7-16 (2015). 5. Sarkar M, Smith AE, Pielak GJ. Impact of reconstituted cytosol on protein stability. Proceedings
of the National Academy of Sciences of the United States of America, 110: 19342-19347 (2013).
4. Smith AE, Sarkar M, Young GB, Pielak GJ. Amide proton exchange of a dynamic loop in cell
extracts. Protein Science, 22: 1313-1319 (2013). 3. Benton LA, Smith AE, Young GB, Pielak GJ. Unexpected effects of macromolecular crowding
on protein stability. Biochemistry 51: 9773-9775 (2012). 2. Wang Y, Sarkar M, Smith AE, Krois AS, Pielak GJ. Macromolecular crowding and protein
stability. Journal of the American Chemical Society 134: 16614-16618 (2012).
1. Smith AE, Buchmueller KL. Molecular basis for the inhibition of HMGA1 proteins by distamycin A. Biochemistry 50: 8107-8116 (2011).
Honors
James Morton Alexander Graduate Award for outstanding performance in coursework and research,
2013 Phi Beta Kappa in recognition of high attainments in liberal scholarship, 2009 American Institute of Chemists Award in Biochemistry in recognition of achievement during the
2008/2009 academic year
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Research Presentations
5. The 28th Annual Symposium of the Protein Society, 2014. Poster: “Hydrogen exchange of disordered proteins in living cells.” Received “best poster award.”
4. St. Jude Children’s Research Hospital National Graduate Student Symposium, 2014. Poster and talk: “Amide exchange of intrinsically disordered proteins in Escherichia coli.”
3. South Eastern Regional meeting of the American Chemical Society, 2009. Nucleic acids graduate session talk: “NMR and FRET characterization of the inhibition of the HMG A/T hook by distamycin.”
2. National meeting of the American Chemical Society, 2009. Poster: “NMR characterization of the inhibition of the HMG A/T hook by distamycin.”
1. South Eastern Regional Meeting of the American Chemical Society, 2008. “Monitoring competition via NMR”: Recognized by an award for undergraduate presentations.
Research Experience
Ph.D. Dissertation Research, UNC
Protein amide-hydrogen exchange in vitro and in living cells
Heteronuclear, high-resolution Nuclear Magnetic Resonance (NMR) o Pulse programming o Exchange spectroscopy o Native-state hydrogen-deuterium exchange
Effect of cell lysates on amide-hydrogen exchange rates
Quantifying intracellular pH of Escherichia coli
Hydrogen exchange of intrinsically disordered proteins in E. coli
Recombinant protein expression and purification
08/2010 - present
M.S. Thesis Research, Furman University
Molecular basis for inhibition of AT hook proteins by distamycin
Distamycin induced displacement of a protein bound to the minor groove of DNA
NMR of DNA:ligand complexes o 1D (1H, 31P), 2D 1H homonuclear
Fluorescence spectroscopy, including Förster resonance energy transfer and anisotropy
06/2009 - 08/2010
Undergraduate Research, Furman University
National Science Foundation Research Experience for Undergraduates Fellow NMR studies of interactions between DNA and two minor groove binders, distamycin A and the AT hook of HMGA1.
01/2008 - 05/2009
Techniques/Skills
Nuclear Magnetic Resonance
Two- and three-dimensional protein heteronuclear NMR
Protein backbone and DNA base resonance assignment
Protein 15N relaxation including longitudinal, transverse, and constant-time Carr-Purcell-Meiboom-Gill dispersion measurements
Native-state hydrogen-deuterium exchange
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Solvent exchange spectroscopy, SOLEXSY
Homonuclear nuclear Overhauser effect spectroscopy
Data processing with NMRPipe/NMRDraw, NMRViewJ
Varian/Agilent and Bruker spectrometers Bruker pulse programming
MATLAB Calorimetry
Differential scanning calorimetry (DSC)
Isothermal titration calorimetry (ITC) Flourescence
Förster resonance energy transfer Anisotropy
Molecular Biology
Site-directed mutagenesis
Polymerase chain reaction
Recombinant protein expression
FPLC (GE Akta) purification including ion exchange, affinity, and size-exclusion chromatography Work/Teaching Experiences UNC Biochemistry Lab Teaching Assistant
Molecular biology
Protein purification
Enzyme kinetics
09/2011 - 12/2011
Furman NMR Maintenance
Trained students in operation of NMR spectrometers
Cryogen fills
Non-axial shim updates, gradient maps, probe tuning
Troubleshooting
05/2009 - 08/2010
Furman University Chemistry Teaching Assistant
NMR lab for undergraduates
Winter 2008, Spring 2009
Furman University Chemistry Tutor Spring 2008 - Spring 2009
Mentoring
An undergraduate:
Summer/Fall 2013: Understanding the change in Escherichia coli interior pH in high density NMR cultures, and the location of recombinant α-synuclein in E. coli.
Spring 2014-present: Studying the stability and dynamics of the N-terminal SH3 domain of the drosophila protein drk under crowded conditions.
A post-bac
Summer 2014: Determining the affects of N-terminal acetylation on α-synucliein in E coli. Graduate rotation students:
Summer 2013: Monitored in-cell ligand binding with 19F NMR and dihydrofolate reductase.
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Spring 2013: Attempted optimization of Concensus Tricopeptide Repeat (CTRP) proteins. Taught protein expression and purification and basic NMR
Fall 2012: Expressed and purified CTPR proteins 2 and 3. Collected 2D 15N-1H correlation spectrum of CTPR2 and attempted in-cell NMR. Taught protein expression and purification and basic NMR
Understanding effects of polyethyleneglycolation (PEGylation) on ubiquitin:
Undergraduate researcher (Fall 2012): DSC analysis of PEGylation of ubiquitin up to 100:1 molar ratios
High school teacher (Summer 2012): DSC characterization of PEGylated ubiquitin
Graduate rotation student (Winter 2012): Ubiquitin pH optimization for DSC, 20:1 PEGylation, NMR native-state hydrogen exchange of PEGylated ubiquitin
Graduate rotation student (Fall 2011): Preliminary optimization of DSC instrument using lysozyme and ubiquitin
High school teacher (Summer 2011): SDS-PAGE analysis of PEGylated ubiquitin at different molar ratios reagent:protein