spotfire user conference 10-15-03 the biomarker company ™ delivering biomarker discovery data to...
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Spotfire User Conference 10-15-03
the biomarker company™
Delivering Biomarker Discovery Data to Customers and Collaborators using Posters
Keith Joho, Ph.D.Vice President, Informatics and Bioanalytical Operations
Spotfire User Conference 10-15-03
Biomarker Discovery
Simple molecules
CD4+ T-cells
InsulinPSA
HbA1CGlucoseCholesterol
metabolitescarbohydrates
steroidslipids
peptides proteinsprotein complexes
mRNA/genes
cells
patients
Clinical Phenotype
Complex Systems
CRPHomocysteineTG? ? ?
Her2 Cells
Mass SpectrometryLow MW (Metabolome) Proteome
ImmunoassaysCytometry (SurroScanTM cytometer)
eCRF, eMR
SurroMed Technologies:
Genechip
Spotfire User Conference 10-15-03
SurroMed Data Warehouse
OracleLIMS
Clinical•eCRF•EMR
Cytometry
ELISA
Mass Spectrometry•Proteomic•Metabolomic
Spotfire User Conference 10-15-03
SurroStat™ Architecture
Oracle
Web Server
HTTP/ HTTPS
CLIENTS
Sun ONEJ2EE ApplicationServer
JSPEJBServlets
SurroStat™
S-Plus AS
Decision Site
JDBC
Posters
Spotfire User Conference 10-15-03
SurroStat™ Spotfire Integration
Spotfire User Conference 10-15-03
SurroMed Posters Architecture
PostersReposito
ry
DecisionSiteServer
(Internal)
Posters
DecisionSiteServer
(Production)
Posters
DMZDMZSurromedSurromedInternalInternalNetworkNetwork
Customer A
InternetInternet
Customer B
HTTPS
HTTPS
Publish
Customer C
HTTPS
User Profile
Database
PostersReposito
ry
User Profile
Database
Data Warehouse