supplementary figure 1
DESCRIPTION
Supplementary Figure 1. MW/1000. pH. SJIA. POLY. Others. F. FI. F. KD. Q. Q. C3. AGP1. ACT. SAP. SAA. S100A8. S100A9. HP. CRP. C9. C4. APO-IV. APO-L1. AMBP. KLKB1. VDB. CFH. ATIII. A2M. ATIII. APO-E. APO-D. FGG FGB. TTR. GSN. APOA1. Figure 1. 12. 10. 8. - PowerPoint PPT PresentationTRANSCRIPT
Supplementary Figure 1
pH
MW
/100
0
number spot label Protein biomarker
1 1 (a,b) APO12 2 GSN3 3 TTR4 4 FGB5 5 FGG6 6 APOD7 7 APOE8 8 (a,b) ATIII9 9 (a,b) A2M10 10 (a,b) CFH11 11 VDB12 12 KLKB113 13 (a,b) AMBP14 14 APOIV15 15 APOL16 16 (a,b,c) C417 17 (a,b) C918 18 CRP19 19 (a,b,c) HP20 20 S100A921 21 S100A822 22 (a,b) SAA23 23 SAP24 24 ACT25 25 AGP126 26 C3
F Q
SJIA
APOA1
GSN
APO-D APO-EATIII
A2M
ATIIICFH
TTR
VDBKLKB1AMBP
APO-L1 APO-IVC4
C9
CRP
HP
S100A9S100A8
SAA
SAPAGP1 C3
ACT
FGGFGB
F Q
POLY
FI KD
Others
Figure 1
Supplementary Figure 2
UCSDF
UCSFF
StanfordF
UCSFQ
StanfordQ
CRP HP SAA S100A8/S1009
0
2
4
6
8
10
12
Scal
e (n
orm
aliz
ed p
rote
in
conc
entr
atio
n (u
g/m
l)/m
g)
Figure 2
F QSJIA
ATIII C4 C9 SAA A2MPI MW4.6 55K4.7 55K
5.3 55K
5.0 60K
4.9 60K4.8 60K
4.7 60K
PI MW
8.2 35K
8.5 35K
6.3 44K
4.0 17K
PI MW
5.9 75K
5.0 60K
5.1 60K
5.2 60K
5.6 60K
5.3 60K
5.4 60K
PI MW
7.1 11K
5.5 14K
5.5 11K
6.0 11K
6.7 11K
PI MW
5.3 160K
5.8 65K
4.9 160K
5.4 160K
5.3 160K
F Q
SJIA
Figure 3A
SAAS100A9S100A8
CRPHP
SAPAPO IV
ACTAGP1
C4GSNA2M
APO A1CFHTTR
0.00
1 2 5 10 20
Number of features called significant
Fals
e di
scov
ery
rate
(FD
R)
0.05
0.10
0.15
0.20
0.25
0.30
F Q
SJIA
F Q
POLY
KD
SJIA
F FI
SJIA
F
Supplementary Figure 3
AGP1
SAP
SAA
APO1
GSN
APOIV
HP
A2M
ATIII
KD
SJIA
F
Goo
dnes
s of
cla
ss s
epar
atio
n –
D pr
obab
ility
SJIA Training SJIA Testing
127654Feature# 8 9 127654 8 9
Figure 3B
Supplementary Figure 4
S100A12
SJIA F
SJIA Q
Poly F
Poly Q
Normals
0.00
0.05
0.10
0.15
S100A12
ug/m
l