ten years of fspm - metla · functional plant biology vol. 35, no. 5, 2008. ... thornley!s...

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FSPM07 1 Ten years of FSPM R. Sievänen

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Page 1: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

FSPM07 1

Ten years of FSPM

R. Sievänen

Page 2: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

FSPM07 2

Outline

Meetings

Why? - historical background

Scientific specialty

What next?

Page 3: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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1) The Helsinki Workshop on Functional- Structural Tree ModelsDecember 12-13, 1996 Helsinki Finland

Silva Fennica vol. 31 no. 3, 1997

2) Second International Workshop on Functional-Structural Tree Models

12-15 OCTOBER 1998, CLERMONT-FERRAND, FranceAnnals of Forest Science vol. 57 no. 5/6 2000

3) Third International Workshop on Functional-Structural Tree and Stand Models

September 27-30, 2001, Val-Morin (Québec), Canada

4) 4TH International Workshop on Functional-Structural Plant Models

07-11 June 2004, Montpellier, France

New Phytologist vol. 166 no. 3, 2005

5 ) 5th International Workshop on Functional Structural Plant Models,

November 4-9, 2007, Napier, New ZealandFunctional Plant Biology vol. 35, no. 5, 2008

Page 4: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Sizes of meetings

Page 5: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Different kinds of contributions (only oral presentations)

Page 6: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Subject areas covered (only oral presentations)

Page 7: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Four directions: from the 70!s - not a review

1) Process-based models - resource related research

2) Shoot population models

3) Plant architecture

4) The algorithmic approach

Why?

Page 8: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Process-based models

Example: Thornley!s transport-conversion model

It became evident early on that structure of the growing plant is

needed in such models (for allocation of growth) !assumptions, functions about structure, e.g. pipe model

Page 9: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Process-based models - pipe model

Proportional cross-sectional areas: Ar ∝ As ∝ Ab ∝ Af

Lengths of of “pipes” : L

⇒ allocation of growth to different parts of the tree

1D tree architecture

Ar

As

Ab

Af

L

Valentine(1988)

Page 10: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Studies inspired by John Harper!s book Population Biology of Plants (1977)

Shoot population models

Page 11: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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“the [tree] crown is assumed to be a population of branches or shoots. ... growth and

development of the crown could be analysed on the basis of the birth and death of such units”

(Kellomäki and Väisänen 1988

Shoot population models

Page 12: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Shoot population models

Contain the basics needed for connecting the structure and function

Kellomäki & Strandman (1995)

Page 13: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Plant architecture

Hallé, Oldeman, Tomlinson: 23 architectural models

Honda 1971, and subsequent studies & models

de Reffye et al, AMAP - Botany and computational plant

architecture

Page 14: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Algorithmic beauty of plants , Prusinkiewicz & Lindenmayer - L-

systems

AMAP, de Reffye et al. - development as stochastic process

Growth Grammars, GROGRA, W. Kurth

Object-oriented approaches - e.g. Breckling, model Almis

Algorithmic approach

Page 15: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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The challence

- processes: many, at manyorganizational levels, time scales

- architecture: many scales

- properties: huge natural variation, localvalues needed for realistic predictions

- measurements: can they cope withmodels?

- mathematical methods: challenge islacking homogeneity

- modeling software: integration of allaspects of structure and function

Page 16: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Page 17: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

FSPM07 17

What’s next?

Scientific specialty

Research

Page 18: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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What’s next? - Scientific specialty?

Stages in a developing specialty (Mullin): both intellectualand social factors involved

1) Paradigm

- seeing: what, how, interpretation

- set of individuals in a similar cognitive situation

2) Communication network

- increased connection & interaction

- informal

3) Cluster

- scientists begin to draw boundaries around thoseworking around the common problem, stable

4) Specialty

- institutionalized cluster with regular processes fortraining and recruitment into institutionally definedroles

Page 19: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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What’s next? - Scientific specialty

Law (1973)

Permissible/Impermissible: weak in FSPM

Preferred research problems: from other disciplines

! not specialty, doubtful if ever will be

Page 20: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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What’s next - Research

Page 21: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Four levels of hierarchy - cells

P. Huijser

Page 22: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Four levels of hierarchy - organ

Page 23: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Four levels hierarchy

- individual

Page 24: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Three levels hierarchy

Plant community

Four levels of hierarchy -

community

Page 25: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Challenges - Integration of hierarchical levels?

Can FSPMs join more than two levels?

Rule of thumb for modelling: make your model usinginformation on one level and make your predictions onthe next level (above).

Modelling frameworks have improved, can this rule bechallenged?

Page 26: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Challenges - Emergent properties

Page 27: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Challenges - Emergent properties

- Dominant height of an even-aged forest stand is (fairly)independent on density

- -3/2 power law (or equivalent)

- Biomass production ∝ intercepted solar radiation

crops 0.85 - 4.6 g DM/MJtrees 2.5 - 3.5 g DM/MJ

Page 28: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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- Pipe model

- Halle et al., 23 models of tree architecture

Challenges - Emergent properties

As

Ab

Af

Ar

Valentine (1988)

Page 29: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Integration of several processes?

Challenges - next meeting topics

Page 30: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

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Do we see more practical applications in the future?

Challenges - next meeting topics

Page 31: Ten years of FSPM - Metla · Functional Plant Biology vol. 35, no. 5, 2008. ... Thornley!s transport-conversion model ... Studies inspired by John Harper!s book Population Biology

Metsäntutkimuslaitos Skogsforskningsinstitutet Finnish Forest Research Institute www.metla.fi

Thank you