The Hyve Introduction TRANSMART ANNUAL MEETING 2015

AMSTERDAM, OCTOBER 20, 2015

CEO, The Hyve

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The Hyve

u  Professional  support  for  open  source  so0ware  for  bioinforma4cs  and  transla4onal  

research  so0ware,  such  as  tranSMART,  cBioPortal,  i2b2,  OHDSI,  Galaxy  and  ADAM          

 

 

Mission  Enable  pre-­‐compe44ve  collabora4on  in  life  science  R&D  by  leveraging    open  source  so,ware  

Core  values   Share        Reuse      Specialize  

Office  Loca5ons  Utrecht,  Netherlands  Cambridge,  MA,  United  States  

Services  So0ware  development  Data  science  services  Consultancy  Hos4ng  /  SLAs  

Fast-­‐growing  Started  in  2012  32  people  by  now  

Interdisciplinary team

so0ware   engineers,   data   scien4sts,   project   managers   &   staff;   exper4se   in  bioinforma4cs,  medical  informa4cs,  so0ware  engineering,  biosta4s4cs  etc.    

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Share : Transparency

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Open Source u  Source code openly accessible and reusable for everyone

u  Enables pre-competitive collaboration: both academics and

industry can use and enhance it à leverage public funding

u  Transparency: verification (scientific as well as IT security) can be

done by anyone, no ‘black box’

Consumer market examples:

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Why open source?

u  Leverage joint innovation power of academics, industry and SME’s

u  Leverage public funding from EU and NIH

u  Build a joint product roadmap and combine investments

u  Proven model: works very well in cloud computing (Linux, OpenStack),

in web development and for data science in general (R, Spark etc.)

u  Prerequisite: collaboration à community building

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Open Source in Precision Medicine

Study design:

Biobanking:

Scientific compute:

Data visualisation:

Workflow / NGS:

Datawarehousing:

Imaging:

Clinical - eCRF & apps: