understanding how campylobacter colonizes chickens and ... · former campy team members: david...

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Victor DiRita Department of Microbiology & Molecular Gene8cs Michigan State University Understanding how Campylobacter colonizes chickens and adulterates the food supply

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Page 1: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

VictorDiRita

DepartmentofMicrobiology&MolecularGene8csMichiganStateUniversity

UnderstandinghowCampylobactercolonizeschickensandadulteratesthefoodsupply

Page 2: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda, D.V.M., Ph.D. Jeremiah Johnson, Ph.D. key collaborators Kate Eaton, D.V.M. – Michigan Vincent Young, M.D., Ph.D. – Michigan Jonathan Livny, Ph.D. – Broad Institute Jennifer Gaddy, Ph.D. – Vanderbilt University Bruce Cooper, Ph.D. – Purdue University William Miller, Ph.D. & team - USDA, Albany, CA

acknowledgments

DiRita Lab Natalia Martin, Ph.D. Jessica Beauchamp, Ph.D. Rhiannon Levecque, M.S. Chanrith Siv Andrew Van Alst Husnain Ahmed Cole McCutcheon Olivia Walser Joe Hostnik Ben Sims Melissa Meschkewitz Alex DeRita

Rudolph M. Hugh Endowment

Page 3: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

Measuring progress toward Healthy People 2020 goals2015 FOOD SAFETY REPORT

Pathogen Healthy People 2020 Target Rate* 2015 Rate† Change Compared with 2006-2008§

Campylobacter 8.5 12.97 © 9%

E. coli O157¶ 0.6 0.95 ª 30%

Listeria 0.2 0.24 No change

Salmonella 11.4 15.89 No change

Vibrio 0.2 0.39 © 34%

Yersinia 0.3 0.29 No change

*Per 100,000 population†Culture-confirmed infections per 100,000 population

§2006-2008 were the baseline years used to establish Healthy People 2020 targets¶Shiga toxin-producing Eschericha coli O157

For more information, visit www.cdc.gov/foodnetCS264717-A April 2016

Page 4: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

X

Page 5: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

today

1. farm & laboratory models of association between Campylobacter/chicken/microbiota 2.  what traits are used by C. jejuni to colonize chickens? •  zinc wars in the gut

3.  can we reduce the colonization of C. jejuni in chickens? •  campynexin campaign

Page 6: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

naturally-infectedchickens

Page 7: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

Campyloadsinfarm-raisedadultchickens

C.jejunimono-colonized

C.jejuni+C.colico-colonized

Page 8: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

farmbirdmicrobiomeprofile

Family

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 200

20

40

60

80

100

Rel

ativ

e A

bund

ance

Campylobacter

Page 9: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

nocorrela8onbetweencecalmicrobiotastructureandCampylobactercoloniza8onload

Page 10: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

experimentalchickcoloniza8on

LabAnimals FarmAnimals

Day-of-HatchModel1x103CFUC.jejuni

Coloniza8onfor7-days

Page 11: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

taleoftwoceca–labv.farmbirds

7differentfamilymembers

labbirdsFamily

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 200

20

40

60

80

100

Rel

ativ

e A

bund

ance

76differentfamilymembers

farmbirdsCampylobacteraceae

Page 12: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

what traits are used by C. jejuni to colonize chickens? •  zinc wars in the gut

Page 13: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

STM-derived mutants without motility defects zinc ABC transporter - ZnuABC

X

Page 14: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

STM-derived mutants without motility defects

chick colonization phenotypes of wild type and znuA mutant C. jejuni

znuA

cfu/gm

cecalcon

tent

w.t. znuA/pznuA

znuA

Page 15: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

early colonization dynamics of wild type and znuA mutant

23456789

10

Hours Post Inoculation

cfu

g-1 c

ecal

con

tent

s

6 12 24 48

p = 0.052 p = 0.0024181-176 StR

ΔznuA

coincides with earliest time of cultivable microbes

Page 16: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

colonization of germ free mice and limited-microbiota chicks by znuA mutant

23456789

10

81-176 StR

ΔznuA

n=4 n=4 n=8 n=8 n=8 n=8 n=8 n=8

p < 0.0001

Germ-Free Mice Limited-Flora Chicks Limited-Flora Chicks Conventional ChicksInoculum 106 cfu Inoculum 106 cfu Inoculum 104 cfu Inoculum 104 cfu

cfu

g-1 c

ecal

con

tent

s

germfreemice limitedmicrobiotachicksconven8onalchicks

Page 17: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

fecal transplant

limitedmicrobiotachick+ΔznuA

feedfecalpelletsfromconven8onalsevendaybird

cecalCampycountsat3,7,10dayspostfeeding

coven8onalchick+ΔznuA.

Page 18: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

reduced colonization loads of znuA after fecal transplant

23456789

10

3 7 10

Days Post Inoculation

p = 0.0011 p < 0.0001

ΔznuAΔznuA, conventionalized

n=4 n=8 n=8 n=7 n=7

cfu

g-1 c

ecal

con

tent

s

23456789

10

3 7 10

Days Post Inoculation

81-176 StR

81-176 StR, conventionalized

n=4 n=8 n=8 n=8 n=8

cfu

g-1 c

ecal

con

tent

s

Page 19: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

can we reduce the colonization of C. jejuni in chickens? •  campynexin campaign

Page 20: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

campynexin campaign

Page 21: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

campynexins

campynexinB

compoundAcampynexinA

C.jejuni

C.jejuni

Page 22: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

EC50: 8.18 uM EC50: 11.9 uM

EC50: 10.4 uM EC50: 37.4 uM

EC50: 8.96 uM

campynexindose-responsecurves

Page 23: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

selec8vityofcampynexins

Page 24: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

campynexin A effects

•  dosed at time of inoculation, day 3 & day 6 post-inoculation

•  no obvious pathology –  no evident inflammation –  healthy tissue

WT+DMSO WT+campynexinA

treatment

avg.weight(perbird)

WT+DMSO 46.8g

WT+campynexinA 50.3g

PBS+DMSO 48.1g

Page 25: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

campynexin A v. Campy in chick model

Page 26: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

commonly acquired from food sources

X

Page 27: Understanding how Campylobacter colonizes chickens and ... · former Campy team members: David Hendrixson, Ph.D. Lindsay Davis Gielda, Ph.D. Michael Taveirne, Ph.D Tsutomu Kakuda,

Thank you!