vi-4 jpl catalog upgrades: new tools, new formats and new interfaces brian j. drouin, shanshan yu,...

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VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109- 8099

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Page 1: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces

BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON,

Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109-8099

Page 2: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Cataloging ProcessNew or Improved Spectra

PublishedNew or Improved Spectra

PublishedSearch for related information,

primarily dipole moment magnitude and direction

Search for related information, primarily dipole moment magnitude and direction

Fit Spectra with SPFITFit Spectra with SPFITPredict Spectrum with

SPCATPredict Spectrum with

SPCAT

Document process, especially if different from literature

Document process, especially if different from literature

Merge measured and predicted spectra

Merge measured and predicted spectra

Provide files on ftp and www server

Provide files on ftp and www server

6/18/2010

Page 3: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

More Directory FilesTo assist with searching and database organization, e.g. searchable listing of entries that are known in ISM

Catalog StructureCatalog file c*.cat

•Frequency of the line•Estimated or experimental error (999.9999 indicates error is larger)•Base 10 logarithm of the integrated intensity in units of nm2 MHz•molecules degrees of freedom in the rotational partition function (0 for atoms, 2 for linear molecules, and 3 for nonlinear)•Lower state energy in wavenumbers•Upper state degeneracy•negative indicates reported experimental error.•Identifies the format of the quantum numbers given in the field QN.•Quantum numbers for transition

Documentation file d*.catPartition function, dipole moment, prediction cutoffs, referencesTags for references in c*.lin

Archive files c*.int, c*.par, c*.lin

dipole moment, prediction cutoffs, molecular parameters & Hamiltonian, experimental data

Directory filescatdir.html - linkscatdir.cat – entry name, # lines, log partition, update #

Alternative Catalog Files p*.cat

Same format but not merged with experimental data

kept in subdirectory /catalog/prediction/

Energy files c*.egy•Q uantum numbers for state•Energy in wavenumbersExtended calculation of high J and tabulation of energies will enable dynamic Q(T) calculation

Kept in archive

Calibrated data files c*.dat

simple format of experimental data, frequency & intensity – for species with poor or incomplete analyses

6/18/2010

Page 4: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Real Progress - Archive• Archive now has html interface • 70% complete a 25% increase over 1 year

6/18/2010

Page 5: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Real Progress - MySQL

• New MySQL ‘meta’database– Unifies documentation and linedata– Provides additional (derived) quantities– Enables expanded content• Energy levels• Linewidths & rates?

• SQL Server is on with functionality within JPL• Query Interface is being built

6/18/2010

Page 6: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

MyPHP look at MySQL database

6/18/2010

• New Updates for Multiple Species• New MySQL ‘meta’database– Unifies documentation and linedata– Provides additional (derived) quantities– Enables expanded content• Energy levels• Linewidths & rates?

• Improved Catalog Archive• New Spectral Archive

ReferenceCalculated Frequency

Measured Frequency

Qualityflag

Page 7: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

New Homepage

6/18/2010

Page 8: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Example of SQL query

6/18/2010

Page 9: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Example of SLAP

6/18/2010

Page 10: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Developing Standards

• IVOA - International Virtual Observatory Alliance– ‘owners’ of SLAP – Simple Line Access Protocol

• SSLDM – Simple Spectral Line Data Model– The main use of the SSLDM is to provide data

model support to the Simple Line Access Protocol, so to allow the consumption of Spectral Line List databases using a common/standard interface.

• VAMDC (Virtual Atomic and Molecular Data Centre, www.vamdc.org)

6/18/2010

Page 11: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Sharing JPL dataPassword protected

contact Brian [email protected]

6/18/2010

Page 12: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

Acknowledgements• Tony Remijan– Blueprint for SQL database

• Brian Knosp – web interface, implementing SLAP

• Bill Adler – system administration

• Carolyn Brauer, Ed Cohen, Herb Pickett – consulting on archive

• NASA ADP – funding• Copyright 2010 California Institute of Technology• Government sponsorship acknowledged

6/18/2010

Page 13: VI-4 JPL Catalog Upgrades: New Tools, New Formats and New Interfaces BRIAN J. DROUIN, SHANSHAN YU, JOHN C. PEARSON, Jet Propulsion Laboratory, California

suggestions

• wants search window to state limits of listing, min frq, max freq, min intensity, max intensity

• Enable query type for database limits– number of a quanta, e.g. vibration– Frequency cutoffs– Intensity cutoffs

6/18/2010