visualize your big data

Visualize your Big Data THT10350

Premjith Balakrishnan Sib De Business Analytics Product Group September 30, 2014

Copyright © 2014, Oracle and/or its affiliates. All rights reserved. |


• Visualizes data in a circular layout

• Ideal for exploring relationships between objects or positions

• Aesthetically appealing

• Very high data-ink ratio

• Ideal for visualizing genomics data

Visualizations - Circos

CIRCOS


Visualizations – Many more

Genome Browser Volcano Plot Kaplan Meier Survival Curve

RDF graph Alignment Visualization many more …


• Isn’t BI visualization? Is it sufficient?

• Isn’t ‘discovery’ visualization? When is it applicable?

• What is “advanced” visualization?

• How to leverage complex visualizations on *all* my data?

• What about the data volume and performance characteristics?

• Deployment options? Enterprise scale? Ease of use? Tool availability?

• Security? Provisioning users to data?

Visualization in the context of Big Data Analytics Many aspects to consider

Answer: IT DEPENDS!


What tools you pack depends on what job needs to be done

Different jobs need different tools


Different jobs, different needs

A workshop needs a toolbox and not just a ‘tool’


Next Generation Genome Sequencing

• Cost of genome sequencing is rapidly decreasing; throughput is increasing

• Each run generates huge volumes of data

• Computationally intensive processing

• Specialized skills needed to analyze the data

• Strong open source community, fostering rapid innovation

Big Data Analytics Solution Perspective

$1 Billion $1000

1.5 TB per run

10 years Days

Millions of reads

824 packages


Data reservoir with a flexible data model

Expanding variety and depth of data sets

Prescription Data

FAERS, MAUDE

Argus

Siebel

Electronic Medical Records

Insurance Claims Data


Discover and predict, fast

Many different users with varying analytic needs

Safe

ty

Man

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ctu

rin

g

Sup

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Ch

ain

R&

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Clin

ical

Discovery / BI insight

Predictive analytics / statistics insight


Wide variety of insight needs

Expanding universe of users

Flexible Data Model

Clinician

Drug Discovery

Clinical Trials

• Personalized medicine • Drug effectiveness on

specific patient

• Recruiting new patients for study

• Cohort analysis

• Pathways analysis • Effectiveness study

Characteristics of visualization needs

• Patient centric view • Need a scalable BI environment • Hide data access complexity from end user

• Computationally intensive queries • Expose deeper access to data • Ad hoc visualizations, based on investigation needs • Need to blend in latest from open source community • RDF graph storage for knowledge base

• Blend in predictive analytics to help with patient selection

• Scalable BI environment for larger base of users • Statistical insight as well as BI to drive decisions


Different demands on visualization and data access

Diversity in audience

Flexible Data Model

Clinician

Drug Discovery

Clinical Trials

• Personalized medicine • Drug effectiveness on

specific patient

• Recruiting new patients for study

• Cohort analysis

• Pathways analysis • Effectiveness study

What type of analytics / data access needs exist


Demo – Patient cohort recruitment for trials

1 2

3 4

1. Review a cohort of patients by their demographics and other attributes

2. A way of identifying specific set of patients of interest for a trial. Most likely done with an automated script

3. Review the survival curves for the profile and analyze how it varies with age

4. A genome browser view to review huge datasets but identify specific areas of interest

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Many facets of Big Data Analytics

Discover and predict, fast

Simplify access to all data

Secure and govern all data


Industrial-Strength R Across All Data

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One Fast, Secure Query Across All Data

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NoSQL

BIG DATA SQL


Oracle Big Data Management System

SOU

RC

ES

DATA RESERVOIR DATA WAREHOUSE

Oracle Database

Oracle Industry Models

Oracle Advanced

Analytics

Oracle Spatial & Graph

Big Data Appliance

Apache Flume

Oracle GoldenGate

Oracle Event Processing

Cloudera Hadoop

Oracle Big Data SQL

Oracle NoSQL

Oracle R Advanced Analytics for Hadoop

Oracle R Distribution

Oracle Database

In-Memory, Multi-tenant

Oracle Industry Models

Oracle Advanced Analytics

Oracle Spatial & Graph

Exadata

Oracle GoldenGate

Oracle Event Processing

Oracle Data Integrator

Oracle Big Data Connectors

Oracle Data Integrator


Oracle Big Data Platform Big Data Management System

z BY INDUSTRY & LINE OF BUSINESS

BIG

DA

TA

AP

PLI

CA

TIO

NS

DISCOVERY

BU

SIN

ESS

AN

ALY

TIC

S

BUSINESS ANALYTICS

DATA RESERVOIR

BIG

DA

TA

MA

NA

GEM

ENT

DATA WAREHOUSE

SOU

RC

ES

Copyright © 2014, Oracle and/or its affiliates. All rights reserved. | Oracle Confidential | #BeyondBigData 19

Enterprise Big Data Architecture

Copyright © 2014 Oracle and/or its affiliates. All rights reserved. |

BIG DATA MANAGEMENT

BIG DATA ANALYTICS

BIG DATA APPLICATIONS

BIG DATA INTEGRATION

CREATE VALUE FROM DATA

Streaming + Batch

Data Reservoir + Data Warehouse

Discovery + Business Analytics

Mobile + Web + On-device

visualize your big data

Technology

oracle andor

data accessdiversity

data volume

advanced visualization

isnt bi visualization

different tools

specific set of patients

cohort of patients