wolf-karsten hofmann, md, phd professor of medicine department of hematology and oncology
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European LeukemiaNet Work-Package 8: Myelodysplastic Syndromes Suggestions on Microarray Experiments. Wolf-Karsten Hofmann, MD, PhD Professor of Medicine Department of Hematology and Oncology University Hospital Benjamin Franklin Berlin, Germany. Microarrays in MDS: What is the need?. - PowerPoint PPT PresentationTRANSCRIPT
Wolf-Karsten Hofmann, MD, PhDProfessor of MedicineDepartment of Hematology and OncologyUniversity Hospital Benjamin FranklinBerlin, Germany
European LeukemiaNet
Work-Package 8: Myelodysplastic Syndromes
Suggestions on Microarray Experiments
Microarrays in MDS: What is the need?
•Multiple microarray-data from CD34+ cells (other cells are in discussion, granulocytes?) at the time of initial diagnosis of MDS.
To correlate specific gene expression profiles with diagnosis and risk/course of the disease?
To add new prognostic parameters/gene expression profiles? To predict response to treatment?
•Central sample collection!
•Standardization of microarray protocols (e. g. Affymetrix platform)!
•Tight collaboration with WP13 (Gene Profiling: T. Haferlach, W. Hiddemann)!
Microarray Experiments in MDS
•Aims To use gene expression profiles for classification or risk-evaluation in MDS
To detect altered molecular pathways in MDS-cells
•Technique Most common: Oligonucleotide microarrays (Affymetrix) Less common: cDNA-arrays
WKH 02/2003
Erythropoiesis (CD71+)All genes (22,283)
Megakaryopoiesis (CD61+)All genes (22,283)
Time course of gene expression (normal CD34+)
MicroFluidic Cards
Application in MDS studies?
(Future) applications Hematology UMCN
• Downstream targets of WT1 in AML, MDS, and in murine transplant model
• Hematology Card, targets involved in leukemogenesis, cell cyclus, differentiation/proliferation
• ABC transporter genes in AML and MDS
• Software package for cluster analysis
Meeting of the European LeukemiaNet, WP8 (MDS): Salamanca, Nov. 2004
Interaction with AML workpackage
Listing: European, national studies recruiting both MDS
and AML (according to FAB) patients
total number of studies: >25
standard induction treatment: >80 %
non-intensive treatment: < 20 %
studies including patients aged >60 years: ca. 10
Meeting of the European LeukemiaNet, WP8 (MDS): Salamanca, Nov. 2004
Interaction with AML workpackage
Biological agents active in „overlap studies“ of MDS and AML
• farnesyl transferase inhibitors
• histone deacetylase inhibitors
• anti-angiogenic agents
• DNA methyltransferase inhibitors
• low-dose melphalan
Meeting of the European LeukemiaNet, EHA, Geneva June 10, 2004WP8: MDS
Interaction with AML workpackage
MDS and AML as a biological continuum
• blast cut-off lowered over time (50==>30==>20%)
• cytogenetics similar in high-risk MDS and sAML, tAML
• inclusion of high-risk MDS and bona fide AML patients in same studies
40
30
20
10
% BM blasts
5
3 6 9 12 months
1) indolent, „low-risk“ MDS2) evolving, „high-risk“ MDS3) acute myeloid leukemia (with or without multilineage dysplasia)
4) AML from MDS (> 6 months duration)5) „RAEB-t“ (FAB classification) = AML (WHO classification)
6) smouldering AML
33 4
6
2
5
1
Karyotype abnormalities (%)Age (years) n
no single double complex numerical Chromosome5 Chromosome 7
Rossi 2000i MDS/AML n.g.
>65
35
48
31
27
14
13
17
14
37
46
89
93
20
31
27
27
Mauritzson 1999ii MDS
AML
>65
>65
281
161
48
51
28
24
7
6
16
20
49
49
22
16
12
8
Preiss 2003iii AML median 67 (range: 16-93) 303 47 41 15 44 24 15 16
i Rossi G, Pelizzari AM, Bellotti D, Tonelli M, Barlati S: Cytogenetic analogy between myelodysplastic syndrome and acute myeloid leukemia of elderly patients. Leukemia 2000 14(4): 636-641
ii Mauritzson N, Johansson B, Albin N, Billström R, et al.: A single-center population-based consecutive series of 1500 cytogenetically investigated adult hematological malignancies: karyotypic features in relation to morphology, age and gender. Eur J
Haematol 1999;62:95-102.iii Preiss BS, Kerndrup GB, Schmidt KG, Sorensen AG, Clausen NA, Gadeberg OV, Mourits-Andersen T, Pedersen NT: Cytogenetic findings in adult de novo acute myeloid leukemia. A population-based study of 303/337 patients. Br J Haematol 2003, 123,
219-234.
Cytogenetic similarities between MDS and AMLin population-based studies of older patients
From: B. Deschler et al., „Treatment decision-making in the biological continuum of
older patients with myelodysplastic syndrome and acute myeloid leukemia“ (in prep.)
% BM blasts
Inclusion for DAC studies
AML DAC00331Study
MDS DAC 06011EORTC Study
% BM blasts Cytogenetics
poor risk
all
100
90
80
70
60
50
40
30
20
10
all except t(15;17)
Implementation and coordination of ongoing and new clinical trials
specific
• Phase I/II trials (thalidomide, farnesyltransferase inhibitors,
arsenic trioxide and others) Fenaux
• Trials with Hematopoietic growth factors/iron chelators Hellström
• Anticytokine and signal transduction modulating studies Fenaux
• DNA hypomethylating studies Lübbert
• Eradication of the myelodysplastic clone by novel intensive
cytotoxic therapy including autologous SCT Sanz/Mufti
• New forms of allogeneic stem cell transplantation Martino/De Witte
• Immunosuppression Ganser