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Human Gene Therapy ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY

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Page 1: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Human Gene Therapy

ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY

Page 2: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

GENE THERAPY APPROACHES HISTORY TYPES GERMLINE SOMATIC GENE THERAPY VECTORS VIRAL NON VIRAL DISADVANTAGES GENE THERAPY IN SICKLE CELL ANEMIA ETHICAL AND SOCIAL CONSIDERATION CONCLUSION

contents

Page 3: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Gene therapy is the use of genes as medicines, basically to correct defective genes responsible for genetic disorder.

GENE THERAPY

Page 4: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

I. A normal gene could be inserted into a nonspecific location within the genome to replace the Nonfunctional gene (most common)

II. An abnormal gene could be swapped for a normal gene homologous recombination

III. An abnormal gene could be repaired through selective reverse mutation

IV. Regulation (degree to which a gene is turned on or off) of a particular gene could be altered

APPROACHES

Page 5: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

1990, first approved gene therapy case in the United States took place on a four year old girl for the treatment of ADA-SCID, a severe immune system deficiency. The effects were only temporary, but successful.

1992, Claudio Bordignon of Italy performed the first procedure of gene therapy using hematopoietic stem cells as vectors to deliver genes intended to correct hereditary disease.

1993, a new born baby Andrew Gobea, with SCID, was treated by gene therapy technique using retrovirus vector carrying ADA gene.

1999, gene therapy suffered a major setback with the death of 18 year old Jesse Gelsinger who participated in a gene therapy trial for ornithine transcarboxylase deficiency.

Historical Perspectives

Page 6: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

2003, “FOOD and DRUG ADMINISTRATION” (FDA) placed a temporary halt on all gene therapy trials using retrovirus vector in blood stem cells.

Then in April 2003, FDA eased the ban after regulatory review of the protocol in USA, UK, France, Italy and Germany.

2003, Los Angeles research team inserted genes into brain using liposome coated in a polymer called polyethylene glycol.

Page 7: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

In 2005, scientists were able to repair deafness in guinea pig by using adenovirus vector.

In 2006 (March), an international group of scientists announced the successful use of gene therapy to treat two adult patients for a disease affecting myeloid cells.

In 2007, a team of British doctors from Moorefield’s Eye Hospital and University college of London, announced the world’s first gene therapy trial to test a revolutionary gene therapy treatment for a type of inherited retinal disease.

Page 8: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

In 2009 (March), the School of Pharmacy in London tried nanotechnology based gene therapy to target and destroy hard-to-reach cancer cells.

In 2010, a paper by Komaromy et al. report gene therapy for a form of achromatopsia (complete colour blindness) in dogs.

In 2012, Glybera became the first gene therapy treatment to be approved for clinical use in either Europe or the United States after its endorsement by the European Commission.

Page 9: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

TYPES OF GENE THERAPY

Page 10: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

1. Germ line gene therapy: germ cells (sperm or egg) are modified by the introduction of functional genes, which are integrated into their genome.

2. Somatic gene therapy: therapeutic genes are transferred into the somatic cells of a patient.

Page 11: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL
Page 12: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL
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Page 14: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL
Page 15: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Two types of vectors are used,1. Viral 2. Non viralViruses have evolved a way of encapsulating and delivering

their genes to human cells in a pathogenic manner. Scientists have tried to harness their ability by manipulating the viral genome to remove disease causing genes and insert theurapatic ones.

VECTORS

Page 16: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

RNA viruses Use integrase to integrate its genome into the host genomeProblems integrase enzyme can cause insertional mutagenesis i.e.

can insert genetic material of the virus into any arbitrary position in the genome of the host.

successful application till date X linked severe combined immune deficiency SCID due to ADA deficiency with relative success. Cystic fibrosis

Retrovirus

Page 17: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

single stranded DNA viruses can infects a broad range of cells Can insert genetic material at a specific site on

chromosome19 with near 100% certaintyDrawbacks A small virus, carrying only 2 genes in its natural state can produce unintended genetic damage because the

virus inserts its genes directly into host cell’s DNA

Adeno-associated viruses (AAVs)

Page 18: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Double stranded DNA viruses human neurotropic virus large genome which enable scientist to insert more than

one therapeutic gene into a single virus HSV makes an ideal vector as it can infect a wide range

of tissues including muscle, liver, pancreas, and nerve and lung cells.

Herpes simplex virus (HSV)

Page 19: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Double stranded DNA viruses DNA molecule is left free in the nucleus of the host

cell, and transcribed just like any other gene can infect a broader variety of cellsApplications Gendicine,first gene therapy product to be licensed to

treat head and neck cancer

Adenovirus

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Page 21: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

electroporation (creation of electric field induced pores in plasma membrane)

sonoporation (ultrasonic frequencies to disrupt cell membrane),

magnetofection (use of magnetic particle complexed with DNA),

gene guns (shoots DNA coated gold particles into cells by using high pressure)

receptor mediated gene transfer

Non-Viral Methods

Page 22: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

use of synthetic oligonucleotides (to inactivate defective genes by using antisense specific to target gene)

lipoplexes (made up of anionic and neutral lipids) polyplexes (complex of polymers with DNA) Hybrid methods e.g vibrosomes that combine

liposomes with an inactivated HIV or influenza virus and viral vectors with cationic lipids

chemical methods

Page 23: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Short-lived nature of gene therapy Immune response Problem with viral vectors Multigenic disorders Insertional mutagenesis

Disadvantages of Gene Therapy

Page 24: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

sickle cell anemia caused by a change in just one amino acid at a specific

site in the β-globin gene. results in the production of sickle shaped cells which

prevent oxygenated blood from flowing through.

Gene therapy in sickle cell anemia

Page 25: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

the first sickle-cell gene therapy to be tested in humans. At the regenerative medicine and stem cell research

centre of the University of California, Los Angeles, molecular geneticist and physician Donald Kohn is developing protocols for a clinical trial of this technique that is due to start enrolling patients by the end of 2014.

INJECTING GENES

Page 26: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

first harvest bone marrow from the hip bones of patients with sickle-cell disease

then extract haematopoietic stem cells from the marrow Using a viral vector,insert a new, working haemoglobin

gene into the cells’ DNA the old, faulty haemoglobin gene will still be present, but it

will go silent as the new gene takes over The modified cells will then be infused back into the

patient’s bloodstream They will migrate to the bone marrow, where they can

provide a continual source of healthy red blood cells.

Page 27: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

This technique has been tested by injecting modified human haematopoietic stem cells into mice, and found that they were free of sickle cells 2 to 3 months later.(Romero, Z. et al. J. Clin. Invest. 123, 3317–3330 (2013).

Page 28: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

researchers must harvest the bone marrow itself, which can be difficult and slow, and limits the number of cells that can be collected at one time

challenges

Page 29: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Further away from clinical trials, but potentially a lot more exciting, is gene editing.

Zinc finger nucleases(ZFNs) Transcription activator-like effector

nuclease(TALEN) CRISPRs (clustered regularly interspaced short

palindromic repeats)

GENE EDITING

Page 30: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Zinc-finger nucleases (ZFNs) are artificial restriction enzymes generated by fusing a zinc finger DNA-binding domain to a DNA-cleavage domain.

engineered zinc finger nucleases (ZFNs) bind to a specific section of DNA and create a break at both ends

Cells will start to repair the break, at which point a specific sequence of laboratory-made DNA can be slotted into the gap.

Zinc-finger nucleases (ZFNs)

Page 31: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Transcription activator-like effector nuclease TALEN Transcription activator-like effector nucleases

(TALENs) are artificial restriction enzymes generated by fusing a TAL effector DNA binding domain to a DNA cleavage domain.

Transcription activator-like effectors (TALEs) can be quickly engineered to bind practically any desired DNA sequence. By combining such an engineered TALE with a DNA cleavage domain (which cuts DNA strands), one can engineer restriction enzymes that are specific for any desired DNA sequence.

Page 32: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

DNA loci containing short repetitions of base sequences.

CRISPRs are often associated with cas genes that code for proteins related to CRISPRs.

used for gene editing since 2013.

clustered regularly interspaced short palindromic repeats(CRISPR)

Page 33: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Some of the ethical considerations for gene therapy include:

Deciding what is normal and what is a disability Deciding whether disabilities are diseases and whether

they should be cured Deciding whether searching for a cure demeans the live

of people who have disabilities Deciding whether somatic gene therapy is more or less

ethical than germ line gene therapy

Ethical and Social Consideration

Page 34: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

scientists believe that after 20 years, this will be the last cure of every genetic disease. Genes may ultimately be used as medicine and given as simple intravenous injection of gene transfer vehicle that will seek our target cells for stable, site-specific chromosomal integration and subsequent gene expression. And now that a draft of the human genome map is complete, research is focusing on the function of each gene and the role of the faulty gene play in disease. Gene therapy will ultimately change our lives forever.

Conclusion

Page 35: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

Human Gene Therapy : A Brief Overview of the Genetic Revolution Sanjukta Misra*

Romero, Z. et al. J. Clin. Invest. 123, 3317–3330 (2013). Fine, E. J. et al. Nucleic Acids Res. 42, e42 (2014). Suzuki, K. et al. Cell Stem Cell 15, 31–36 (2014).

References

Page 36: ZEESHAN GAUHAR PhD SCHOLOR-BIOTECHNOLOGY.  GENE THERAPY  APPROACHES  HISTORY  TYPES  GERMLINE  SOMATIC GENE THERAPY  VECTORS  VIRAL  NON VIRAL

THANKS