“ dynamics of stoichiometrical and metabolomical traits under climate change ”

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Dynamics of stoichiometrical and metabolomical traits under climate changeGlobal Ecology Unit CREAF– CSIC – CEAB Barcelona ans, Albert Rivas-Ubach, Albert Gargallo-Garriga, Ifigenia Urbina, icer, Marc Estiarte, Iolanda Filella, Joan Llusià, Romà Ogaya, Jose

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“ Dynamics of stoichiometrical and metabolomical traits under climate change ”. Jordi Sardans, Albert Rivas- Ubach , Albert Gargallo-Garriga, Ifigenia Urbina, Jofre Carnicer, Marc Estiarte, Iolanda Filella, Joan Llusià, Romà Ogaya, Josep Peñuelas. Stoichiometry-metabolomic studies - PowerPoint PPT Presentation

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Page 1: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

“Dynamics of stoichiometrical and metabolomical traits under climate change”

Global Ecology UnitCREAF – CSIC – CEAB

Barcelona

Jordi Sardans, Albert Rivas-Ubach, Albert Gargallo-Garriga, Ifigenia Urbina,Jofre Carnicer, Marc Estiarte, Iolanda Filella, Joan Llusià, Romà Ogaya, Josep Peñuelas

Page 2: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Stoichiometry-metabolomic studiesUseful traits to detct and study plant responses to environmental change

Climate change

Sensitivity enough to detect the dynamics of plant responses

PlantMetabolism and stoichiometry shifts

Mechanisms and functions involved in the organism response

Clues to global ecosystem impactsmainly by the effects on trophic webs

Potential improvement of global climate and balance models

Page 3: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Long-time field studies

My first studies of Biogeochemistry in the Global Ecology Unit

Climanani Garraf Site

Prades site

Page 4: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Drought impacts N and P concentrations and contents in Mediterraenan ecosystems

0

10

20

30

40

Protease -Glucosidase

Enzy

me

activ

ity (

g su

bstr

ate

hydr

oliz

ed g

-1 s

oil h

-1)

a

ab

b

b

a a

Control

Runoff exclussion

Runoff exclussion plus partial rainfall exclussion

After four years of drought (Mediterranean forest)

Data from Sardans & Peñuelas (2005)Soil Biology and Biochemistry

Four general results observed in all studies

1. Decreases in soil enzyme and root-enzyme activity2. Decreases of N and P stocks in aboveground biomass3. Increases in total soil N and P stocks but decreses of plant-available stocks4. Changes in plant N:P stoichiometry

-4

0

4

8

Leaves Wood Aboveground

(a) (a)

(b)(b)

Arbutus unedo

50

0

50a a

b b

ControlDrought

Quercus ilex

Biomass fraction

Total Aboveground

P in

crem

ent

(

kg h

a-1) (

2005

-199

9)

0

70

140

210

280

350

Leaves Stem Leaf-Litter

N/P

a

abb

bb

ControlDroughtWarming

Erica multiflora

Sardans & Peñuelas (2007)Functional Ecology

Sardans et al. (2008)Global Change Biology

0.05

0.1

Soil

Solu

ble

Ptot

al (m

g g-1

)

a ab b

0.05

0.1So

il So

lubl

e Po

(mg

g-1)

ba a

0-15 cm soil depth

Treatments

0

0.1

0.2

0.3

0.4

C D DD

Soil

Solu

ble

Pi/P

o

a

ab b

Sardans and Peñuelas (2007)Functional Ecology

Page 5: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

C/N/P ratio related to several ecosystems process

In freshwater ecosystems

N/P RNA(P-rich)

Growth rate

In terrestrial ecosystems No conclussive results of GR at this moment

Related to species diversity

Relatedto species style of life

Related to soil trophic web structure

Changes in N/P ratio is not a minor question

Growth Rate Hypothesis (GR)Elser et al. (1996)

Page 6: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

0

0.05

0.1

Soil

solu

ble

K(m

g g-1

) aab b

0

0.002

0.004

C D DDSo

il so

lubl

e K

/tota

l K

ab b

0-15 cm soil depth

Treatments

Sardans and Peñuelas (2007)Functional Ecology

But K-stocks were also afected by drought

Sardans et al. (2008)Plant and Soil

0

5

10

15

21

Leaves Stems

a

a

ab bb

b

0

2

4

6

8

10

Leaves Stems

a

b

a

Erica multiflora

Globularia alypum

Abs

olut

e ab

oveg

roun

d K

acc

umul

atio

n (k

g ha

-1) (

1999

-200

5)

Plant biomass In soil

Page 7: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Quercus ilex

C

Ca

Fe

K

Mo

N

Na

P S Mg

-1.0 -0.5 0.0 0.5 1.0

PC1 (34%)

-1.0

-0.5

0.0

0.5

1.0

C C C

C

D

D

D

D

-4 -2 0 2 4

PC1 (34% )

-3

-2

-1

0

1

2

3

4

PC2

(19%

)

Control

Drought

PC2

(19%

)Drought changes whole foliar elemental composition

C

C

D

D D

W W W

-4 -2 0 2 4 6

PC1 (42%)

-4

-2

0

2

4

6

PC2

(29%

)

C

DroughtWarming

Control

Globularia alypum

C

Ca

Fe

K

M g

M o

N

Na

P S

-1.0 -0.5 0.0 0.5 1.0

PC1 (42%)

-1.0

-0.5

0.0

0.5

1.0

PC2

(19%

)

Peñuelas et al. (2008)Pol J Ecol

Soil stocks and biomass concentrations of other several elements (Mo, S or Ca) had been changed by drought

Sardans et a. (2008) Biogeochemistry, Sardans et al. (2008) J. Geophys. Res.

Page 8: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Climate change impact in terrestrial ecosystems stoichiometry: how can we advance?

1.Most studies have been focused on N and P (N/P ratio)

Capture our attention in current studies limitations

What dowe need?

1.More elements such as K, but also Mg, S or Ca among others should be considered

2. Stoichiometric studies of terrestrial plants have been mailny focused on foliar tissues, specially in trees

2. Plants also allocate nutrients to other tissues.We need when possible, take into account whole

plant stoichiometry

3. N/P stoichiometry of higher plants not only depends of the allocation to growth, several other functions can be important sinks for nutrients

3. To gain a global knowledgment of the functional causes underlie stoichiometric shifts in plant

responses to climate change

Sardans et al. (2012a) BiogeochemistrySardans et al. (2012b) Pers Plant Ecol Evol SystSardans and Peñuelas (2012) Plant Physiology

How can improve stoichiometry studiesto be a useful trait to detect dynamics

shifts in terrestrial plant vegetation

Experimental, observationals and review studies (reviews and meta-analysis)

Page 9: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

We propose to solve these constrains and advance in the frame of climate change impacts on terrestrial plant communities

Plant functional response

Climate change

Soil resources

Impacts on biotic relationships (competition, herbivorism….)

Change in element use

Changes in gene expresion

Changes in metabolism and molecular structure

Wholel plant stoichiometrical change

1 2

1. Ecometabolomic studies

2. Include other elements such as K.Study the elemental composition and its shifts as a whole

Make the next reasonig

Page 10: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

We developed a method to conduct metabolomic analyses with field sampling

Rivas-Ubach et al. (2013)Methods in Ecology and Evolution

We began to use metabolomics analyses in our studies 2

Page 11: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Plants under different climate conditions shift their metabolism. The corresponding metabolomic analysis informs on the molecular causes underlying the shifts in elemental composition

and stoichiometrical ratios

Rivas-Ubach et al. (2012) PNAS

Stoichiometry+

MetabolomicsElemental

Stoichiometry

MetabolomeN/PSugarsAmino acids

S

Spring Season

Page 12: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Preliminary Results

Metabolomic profiling of Quercus ilex.

Seasonal PCA

Drought:

Polyphenolics (antioxidants)Potassium

Page 13: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Oposite responses of roots and leaves

Page 14: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Ecometabolomics : a tool for several ecological estudiesGreat sensitivity to detect plant responses

• When the plant is wounded the metabolome changes

WoundedNo-wounded

Sardans et al. (2013)Plant Biology

Page 15: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Current ecometabolomic-stoichiometric studiesClimate change effects on the populations of the south border of the distribution Area of important European forest species

Fagus sylvatica

Quercus ilex

Pinus uncinata

Page 16: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Stoichiometry and Metabolism on plant-herbivore relationship

Pine processionary mothsThaumetopoea pityocampa

Page 17: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Until this moment the results show that metabolomics can be an useful tool:

1. To give a global view of plant functions involved in plant responses

2.To explain the causes of plant elemental compostion and stoichiometrical shifts under drought

3. To improve the kowledge of the metabolic pathways up– and down-regulated under drought .

4.Is sensitive enough to detect plant molecular and elemental shifts under different environmental conditions through time

5.To know plant responses to herbivore attack

Page 18: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

The role of potassium

Data from Catalan National Forestal Inventory

Foliar K content (kg ha-1) Foliar K:C content ratio Foliar K:N content ratio

0.007- 4.31

4.31 – 7.65

7.65 – 12.66

12.66 – 22.43

> 22.43

8.2 – 72.7

72.7 – 92.292.2 – 114.2

114.2 – 152.7> 152.7

0.5897 – 1.6434

1.6434 – 2.04912.0491 – 2.5288

2.5288 – 3.4242> 3.4242

Foliar K concentration (mg g-1)

> 7.62

5.67 – 7.62

4.52 – 5.67

3.41 – 4.52

1.0 – 3.41

Precipitation (L m-2 yr-1)

< 400400-500500-600600-700700-800

800-900900-10001000-11001100-1200> 1200

50 Km

0

10

20

30

Evergreens Conifers Deciduous

K co

nten

t in

folia

r bio

mas

s (k

g ha

-1)

a

aa

b

b

ab

ab

ab

WinterSpring

SummerAutumn

Sardans et al. (2012)Functional Ecology

K content is related with MAP

Species adapted to dry climate have higher capacity to allocate more K to foliar biomass during summer

2Second: Whole plant elemental composition

Page 19: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Have we neglegted the K limiting role in terrestrial ecosystems?

Sardans et al. (2012)Global Change Biology (in preparation)

0

10

20

30

40

Grasslands Forests

No-limitingLimiting

1

11

3

33

Num

ber o

f stu

dies

Vegetation type

75% of field studies have observed that K limits growth of terrestrial plants in field conditions

Review of published data

Page 20: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Climate change effects on global plant elemental composition

Different elements plays different functional and structural functions

C (structure,..)N (growth, light capture, metabolism functioning,..)P (growth, energy transfer,…)K (water economy, internal transport,…)Mg (light capture,…)

“Biogeochemical niche”

Each species, as a singular evolutionary product,should have an optimum elemental compositionas consequence of optimum function

Consequence of the optimum adaptation to maximize species fitness in determined abiotic and biotic circumstances, i. e. consequence of long-term genetic adaptation (Genotype)

, but also of short-term capacity to respond under certain limits to life-time environmental competition shifts (Phenotype flexibility)

Peñuelas et al. (2010) Global Change Biology

Page 21: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Principal component 1: 35.6%

-3 -2 -1 0 1 2 3

Prin

cipa

l com

pone

nt 2

: 15.

4%

-6

-4

-2

0

2

4

6

Principal component 1: 35.6%

-1.0 -0.5 0.0 0.5 1.0

Prin

cipa

l com

pone

nt 2

: 15.

4%

-1.0

-0.5

0.0

0.5

1.0

Na

ZnCuKN

Fe

NiAlienNative

-2

0

2

4

6

8

-5 -4 -3 -2 -1 0 1

PC2

(22.

7%)

PC1 (28.6%)

F. excelsior

Q. petrea

Q. canariensis

C. sativaF. sylvatica

Q. humilis x cerrioidesQ. faginea

Q. humilis

Q. cerrioides

Q. suberA. unedo

Q. ilexP. sylvestris

P. pinea

A. alba

P. halepensis P. pinaster

P. nigraP. uncinata

C

N P

NP

NK PK

S Ca

M g

K

-1.0 -0.5 0.0 0.5 1.0

PC1 (28.6%)

-1.0

-0.5

0.0

0.5

1.0

PC2

(22.

7%)

C

N P

NP

NK PK

S Ca

M g

K (A)

(B)

(C)

MediterraneanWet temperateAlpineTransition Med-Temp.

Gymnosperms

Angiosperms

200 400 600 800 1000 1200 1400

M AP (L m -2 yr -1)

-10

-5

0

5

10

15

PC 2

PC 2 = - 1.68 + 0.0021 MAP R = 0.26, P < 0.0001

C

N P

N/P N/K

P/K

S

Ca

Mg

K

-1.0 -0.5 0.0 0.5 1.0

PC1 (27.7%)

-1.0

-0.5

0.0

0.5

1.0

PC2

(20.

7%)

C

N P

N/P N/K

P/K

S

Ca

Mg

K

-6

-3

0

3

-0.6 0 0.6 1.2

PC2

(20.

7%)

PC1 (27.7%)

P. halepensis (3)

P. pinea (4)

C. sativa (8)

P. pinaster (2) P. nigra (ab)

Q. suber (7)

A. unedo (6)Q. ilex (5)

Angiosperms

Gimnosperms

(1) a(2) ab(3) b(4) c(5) d(6) d

(7) e

(8) f

(3) (4) (5)

(1)

(1,2,7,8) (6)a b c

bc

(A)

(B)

Separated throughout PC4

(explaining12% of variability)

“Biogeochemical niche” in action Native and alien species in Hawai

Different forest types in Catalonia

Mediterranean species

Peñuelas et al. (2010)Global Change Biology

Page 22: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Until this moment the results show that the use of more elements that N and P

Give a more global view of the use of resources

Improve the sensitivity in the use of plant elemental composition shift to detect responses to environmental change

Page 23: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

N eutrophication threatens to shift the global stoichiometry

4

8

12

16

8.8

17.7

26.4

35.4

1950s 1980s 1990s 2000s1860s 1900s

N:P

ratio

(mol

ar b

asis

)

N:P

ratio

(mas

s ba

sis)

Natural N2 fixation from continents plus oceans

Natural N2 fixation from continents

Redfield’s ratio

0

50

100

150

200

250

300

350

400N from industrial fertilizersN emissions from fuel combustionN

2 fixation of rice and legume crops

Total anthropogenic NTotal anthropogenic P (mineral fertilizers)

Tg y

ear-1

Global N deposition~ 114 Mtones N yr-1

Global P deposition~ 3.3 Mtones N yr-1

ContinentsN:P ~ 47

Oceans N:P ~ 370

Terrestrial plantsN:P ~ 22-30

Plankton and open ocean watersN:P ~ 15-16

63 0.3

51 3

Peñuelas et al. (2012)Global Change Biology

Changing from local to global scale

Page 24: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Number of “Web of Science” studies reporting effects of changes in N:P ratios and its effects on ecosystems

species composition and function

Human induced chsnges on N/P ratios are already altering ecosystems function and biodiversity by the impacts on N/P ratio is already occuring

Peñuelas et al. (2013)

Natre Communications Submitted.

Page 25: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Global P-cycle is being altered by human activity

Peñuelas et al. (2013)Nature Communicatios(Submitted)

Page 26: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Global climate and C-balance models related to global change should include the changes in nutrients balances and stoichiometry

Our first attempt...Projections under different scenarios of the P demands to fixing C emitted by human activities. The models used were TAXIS, HadCM3, IPSL-CM2 , IPSL-CM4-LOOP, CSM, MPI, LLNL,

FRCGC, UMD, UVIC, CLIMBER, BERNCC

Peñuelas et al. (2013)Nature Geoscience (submitted)

Phosphorus and N/P ratio could be gaining role in global capacity to C fixation andconsequently in the global climatic control

Page 27: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Ecometabolomics-stoichiometric studies

A new tool to study plant responses to climate change

Whole elemental composition shiftsWhole metabolome shifts

Sensitive traits to detect dynamic plant responses

Improvement of the knowledge of the functional mechanisms underliying plant responses (growth, storage, defense, antistress….)

Clues on further consequences throughout trophic web

Useful information to improve global elemental budgets (C, N, P,..) and climatic models

Page 28: “ Dynamics of  stoichiometrical  and  metabolomical traits under climate change ”

Global Ecology UnitCREAF – CSIC – CEAB

Barcelona

Thank you by your attention and…………by no sleepping (if is the case)

From elements toglobal scale