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19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous sy stem 1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I August 19 th 2013

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Page 1: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous system 1

Organization of the nervous system

Raghav RajanBio 334 – Neurobiology I

August 19th 2013

Page 2: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

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Mammalian brain is very similar in its organization across species

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

Page 3: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

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Orienting within the brain – absolute axes and relative axes

ANTERIOR(in front)

POSTERIOR

(behind)

INFERIOR(below)

SUPERIOR(above)

● Anterior/Posterior, Superior/Inferior – absolute axis system

● Rostral/Caudal, Dorsal/Lateral – relative to the long axis of the brain or spinal cord

http://www.rci.rutgers.edu/~uzwiak/AnatPhys/APFallLect19.html

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Medial – lateral axes

MEDIAL(near the

midline)

LATERAL

(away from the

midline)

LATERAL

(away from the

midline)

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

Page 5: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous system 5

Ipsilateral and contralateral – things on the same side or the opposite side

IPSILATERAL (same

side)

CONTRALATERAL (opposite

side)

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Absolute and relative axes are the same in rats

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous system 7

Planes of brain sections

Kandel, Schwartz and Jessell, Principles of Neural Science

Page 8: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous system 8

Planes of brain sections

http://homepage.smc.edu/russell_richard/Psych2/Graphics/human_brain_directions.htm

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Divisions of the nervous system

http://serendip.brynmawr.edu/exchange/brains/structures

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19th August 2013 Bio 334 - Neurobiology I - Organization of the nervous system 10

Central Nervous System (CNS) consists of brain and spinal cord

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Brain is covered by 3 membranes called the meninges

● Dura mater● Arachnoid mater● Pia mater● Along with CSF – they serve as

protection● CSF flows between Arachnoid

and Pia mater

● Fish – one membrane● Birds, reptiles, amphibians -

two

http://www.mayoclinic.com/health/medical/IM03177

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Ventricular system of the brain makes CerebroSpinal Fluid (CSF)

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

Page 13: 19th August 2013Bio 334 - Neurobiology I - Organization of the nervous system1 Organization of the nervous system Raghav Rajan Bio 334 – Neurobiology I

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Parts of the brain – continuing from development of the tripartite brain

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Forebrain divides further into telencephalon, optic vesicles and diencephalon

● Optic vesicles give rise to retina and optic nerves – part of CNS

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Telencephalon grows into cerebral hemispheres, olfactory bulbs

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

● Cerebral lobes grow● Olfactory bulbs sprout out● Cells of the wall divide and differentiate● White matter systems develop

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Gray matter and white matter

● Gray matter – Collection of neuronal cell bodies● White matter – Collection of axons● Brain – gray matter outside, white matter inside● Spinal cord - opposite

http://www.studyblue.com/notes/note/n/peripheral-nerve/deck/1119699

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Organization of telencephalic and diencephalic structures

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Cortex connects with other parts through 3 major white matter systems

● Cortical white matter – axons to and from cortex● Corpus callosum – connects the two hemispheres● Internal capsule – connects cortex to thalamus,

brain stem

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Lateralization of brain function – studied extensively in split brain patients by Roger

Sperry● Corpus callosum severed to treat

epilepsy● Mostly normal people● Clever experiments revealed brain

lateralization of function● Sperry won the Nobel in 1981 for

his work on split-brain patients● "The great pleasure and feeling in

my right brain is more than my left brain can find the words to tell you." Roger Sperry

http://en.wikipedia.org/wiki/Roger_Wolcott_Sperry

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Experiment on split-brain patient

● Right hemisphere shown a picture of snow

● Left hemishere shown a chicken foot

http://thebrain.mcgill.ca/flash/capsules/experience_bleu06.html

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Forebrain is the seat of voluntary action, perceptions, conscious awareness, cognition,

etc.● Telencephalon

– Cortex – neocortex, hippocampus, olfactory cortex– Basal telencephalon – basal ganglia, amygdala, etc.

● Diencephalon

– Thalamus– Hypothalamus

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Cerebral cortex – a layered structure important for sensations, voluntary movements, cognition,

etc. ● Olfactory cortex,

hippocampus

– older cortices– at most 3 layers– divided into subfields

● Neocortex

– newer cortex– 6 layers– arranged into columns

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Cortex has layered organization of cell bodies and neuronal processes

● Neocortex has 6 layers

● Layer 1 does not have cell bodes

● Golgi – cell bodies and processes

● Nissl – cell bodies and proximal dendrites

● Weigert stain – myelinated fibers

Kandel, Schwartz and Jessell, Principles of Neural Science

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This layering develops through neurogenesis from the ventricular zone

● Cells from the ventricular zone exit the cell cycle and migrate outwards

● Pre-plate forms layer I

Dan H Sanes, Thomas A Reh, William A Harris, Development of the nervous system 2005. Chapter 3

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Newly born neurons “pull” themselves up to their final place or migrate along radial glia

scaffolds● Early born

neurons may “pull” themselves up by somal translocation

● Later born neurons migrate along radial glia scaffolds

● Radial glia are progenitors!

Nadarajah B and Parnavelas JG. Modes of neuronal migration in the developing cortex. Nature Revs Neuros. (2002)

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Two modes of neuronal migration

Somal translocation

Radial glia migration

Nadarajah B and Parnavelas JG. Modes of neuronal migration in the developing cortex. Nature Revs Neuros. (2002)

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Interneurons are formed from a different source – the lateral ganglionic emminence

● LGE – ventral telencephalon

● Migrate tangentially into cortex

Nadarajah B and Parnavelas JG. Modes of neuronal migration in the developing cortex. Nature Revs Neuros. (2002)

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Mammalian cortex (layers II-VI) develops in an inside-out fashion – first neurons form inner

layersMonkey

Dan H Sanes, Thomas A Reh, William A Harris, Development of the nervous system 2005. Chapter 3

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Special features of human CNS

● More cortex – sulci and gyriMark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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More lobes in the cortex

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Layering of neocortex is different in different portions of cortex

● Brodmann made a cytoarchitechtural map of cortex – n=1!

● Constantin von Economo and Georg N Koskinos

Kandel, Schwartz and Jessell, Principles of Neural Science

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Brodmann divided cortex into 47 areas based on cytoarchitechture

● Functionally, there can be even more areas within each Brodmann area

Mark F Bear, Barry W Connors, Michael A Paradiso. Neuroscience: Exploring the brain (2007) – Chapter 7

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Layering may separate out inputs and outputs from different regions

● Projections to different regions arise from different layers

● Layer I – III – intracortical connections

● Layer IV – thalamocortical input connections

● Layer V, VI – output connections to subcortical structures

Kandel, Schwartz and Jessell, Principles of Neural Science

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Different types of connections may also come into different layers

● Feedforward and feedback connections may originate and terminate in different layers

● Such connections may be used to determine the position of a particular area in the hierarchy of cortical areas

Kandel, Schwartz and Jessell, Principles of Neural Science

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And different areas connect up in a simple hierarchy like this!

● Visual system● Connections from 1991

paper (20 years ago)

Felleman DJ, Van Essen DC. Distributed hierarchical processing in the primate cerebral cortex. Cerebral Cortex (1991)

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So what can we take from all of this about the organization of neocortex?

● Two important concepts

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The right hemisphere senses the left side and controls the left side of the body

http://scienceblogs.com/thoughtfulanimal/2010/06/30/ask-a-scienceblogger-sensation/http://www.stanford.edu/group/hopes/cgi-bin/wordpress/2010/06/the-hopes-brain-tutorial-text-version/

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Columnar organization of cortex – cells in one column do similar things

Vernon B Mountcastle. The columnar organization of neocortex. Brain (1997)

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Columnar organization of cortex – cells in one column do similar things

Vernon B Mountcastle. The columnar organization of neocortex. Brain (1997)

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Blue brain project – simulate one rat cortical column – building block for brain with 100,000

columns!● About 10,000 neurons

http://bluebrain.epfl.ch/page-52063.html