next generation sequencing - visualization -
Post on 05-Jan-2016
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Next Generation Sequencing - Visualization -
Arif Hossain
Kyung Min Su
Content
Visualization Issues
NGSView
Tablet
Visualization Issues
Huge Data
Various Format
Rendering and Navigation
Extensibility
NGSView
Berkeley DB engine
Front end converter XML format
Open and Documented API http://ngsview.sourceforge.net
NGSView
NGSView
NGSView
Tablet High-performance visualization and data navigation. Display of reads in both packed and stacked formats. Paired end visualization support. File format support for ACE, AFG, MAQ, SOAP2, SAM
and BAM. Search and locate reads by name across entire data
sets. Support for Windows, Apple Mac OS X, Linux and
Solaris, in 32 and 64-bit.
Tablet
Tablet
Tablet
Question?
NGSView http://ngsview.sourceforge.net
Tablet http://bioinf.scri.ac.uk/tablet
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