annotating research resources with rrid’s
TRANSCRIPT
Annotating research resources with RRID’sResource Identification Initiative
Resource Identification Initiative: New type of resource citation
• Have authors supply appropriate identifiers for key resources used within a study such that they are:– Machine processible (i.e., unique
identifier that resolves to a single resource)
– Outside of the paywall– Uniform across journals and publishers
• Pilot project– Antibodies– Software/databases– Genetically modified animals
https://www.force11.org/group/resource-identification-initiative
Why RRID’s?• Researchers do not provide enough
information to conclusively identify which resource was used to produce a result in a paper (Vasilevsky et al., 2013)
• Our current system of citing resources makes it difficult to ask a very basic question: “What other studies used this resource”?
With RRID’s, that question is easy
Bandrowski A, Brush M, Grethe JS et al. 2015 [v1; ref status: awaiting peer review, http://f1000r.es/5fj] F1000Research 2015, 4:134 (doi: 10.12688/f1000research.6555.1)
But...what about the retrospective literature?
Can we assign RRID’s to resources from the descriptions the authors provide?
Annotation Task• Find antibodies, genetically modified animals and software
tools/databases in the materials and methods of a scientific article• Look up the RRID in the Resource Identification Portal• Highlight the first mention of the resource and provide the RRID• Tag the annotation with RRID• View Example
How to find an RRID
Bandrowski A, Brush M, Grethe JS et al. 2015 [v1; ref status: awaiting peer review, http://f1000r.es/5fj] F1000Research 2015, 4:134 (doi: 10.12688/f1000research.6555.1)
Enter search terms
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Click on Cite This andcopy citation info
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Tips• Only annotate actual usage of a resource, not just a
mention in the introduction or discussion• Only annotate with an RRID if you can be sure it is the
correct resource, e.g., it matches a vendor and catalog number
– But you can note where there isn’t enough information available