Biological Data Visualization with Gitools Interactive

Heatmaps

Slides adapted from Nuria Lopez-Bigas Barcelona

http://bg.upf.edu

Multidimensional Cancer Genomics data

Expression patterns

Somatic mutations

Epigenomic profiles

Structural aberrations

Copy number alterations

Clinical information

Patients cohort

Omics data Clinical data

Primary tumors

(Cancer) Genomic Projects

Multidimensional Cancer Genomics data

Bioinformatician

Cancer Researcher

Multidimensional Cancer Genomics data

Tools for biological data interpretation

- Effective visualization - Exploration (Interactivity)- Analysis possibilities

TOOL

Bioinformatician

Clinical data

Omics data

Tumor samples

Gitools Interactive heatmaps

CDKN2A

MDM2

TP53

MDM4

CDKN2A

MDM2

TP53

MDM4

Mutation CNA gain CNA loss

HighLow expression

Tumor samples

Gitools Interactive heatmaps