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    BIOLOGY 12nd Quarter

    Origin of LifeCore Concept 1: Spontaneous

    Generation

    Spontaneous Generationstates that life can arise

    from nonliving matter

    o John Needham proposed SG in mid-

    1700s.

    Heated a beaker fullof gravy with a cork.

    Maggots appeared. DISCLAIMER: Beaker

    may not have been

    heated enough.

    Core Concept 2: Biogenesis

    Biogenesis states that lifecomes from only lifeo Fransesco Redi proposed

    SG in 1668, Italian

    physician.

    Had both covered anduncovered jars.

    Maggots appeared inthe uncovered jars.

    Maggots did not

    appear in the covered

    jars.

    Proved that maggotsform only when flies

    come in contact with

    meat.

    o Lazzaro Spallanzanidecided to improve

    Needhams experiment.

    Boiled to flasks ofgravy.

    Sealed one flask anddid not seal the

    other.

    Microorganismsappeared in the

    unsealed one.

    Proved that themicroorganisms

    produced were

    offspring of the

    microorganism thatentered the flask.

    o Louis Pasteur decidedto settle the argument

    between B and SG in the

    mid-1800s.

    Designed a flask witha long curved neck

    for boiled broth.

    Microorganisms in theair did not make it

    through the curved

    neck.

    Proved that thebroth remained free

    of organisms as long

    as it has no contact

    with the

    microorganisms in the

    air.

    History of the Eartho 4.6 BYA

    temp, volcanicactivity, earthquakes,

    meteor showers

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    Early atmosphereH20, CO, CO2, H2,

    N2, NH3, CH4

    o 3.5 BYA Earliest evidence of

    microfossils outlines

    of ancient

    prokaryotes, similar

    to modern bacteria

    First cells:prokaryotes,

    heterotrophs,

    anaerobeso 1,5 BYA

    First eukaryoteso 650 MYA

    First multicellularorganisms

    o Trends in Evolution Cells: unicellular

    multicellular

    Nutrition:heterotrophs

    autotrophs

    Reproduction: asexual sexual

    Core Concept 3: 4-Stage Chemical

    Evolution

    1. Abiotic synthesis of organicmonomers

    1920s Oparin andHaldene: Conditions on

    primitive Earth favored

    chemical equations that

    synthesized organic

    compounds from inorganic

    compounds

    1953 Miller and Urey:Demostrated Abiotic

    Synthesis of amino acids

    and other organic

    compounds found in living

    organisms today

    2. Abiotic synthesis of polymers Fox: Produced proteinoids

    from clay and organic

    monomers

    3. Abiotic synthesis ofprotobionts

    Ability to maintain aninternal chemical

    environment differentfrom the surroundings

    4. Origin of Genetic Info First genes may have

    been abiotically produced

    RNA

    1968 Francis Crick andLeslie Orgel: RNA is lifes

    first information storage

    system

    G. Cairns-Smith and K.Bernal: Amino Acids and

    nucleotides stick to

    repeating structures of

    clay crystals

    Cell Theory Anton van Leeuwenhoek

    made first microscope

    Robert Hooke coinedthe term cell

    Robert Browndiscovered the nucleus

    Matthias SchleidenAllplants are made of cells.

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    Theodor SchwannAllanimals are made of

    cells.

    Rudolf VirchowAllcells arise from pre-

    existing cells.

    1. All living things are made ofcells.

    2. Cells are the basic units oflife.

    3. Cells come only from othercells.

    Cell Structure and Function Three Basic Structures:

    o Cell Membraneo Nucleuso Cytoplasm

    Organelleso Cell Membrane lipid

    bilayer that surrounds

    the cell and regulates

    entry or exit of

    substances

    Middle Lamella Primary Cell Wall Secondary Cell Wallo Cell wall protects and

    supports the cell

    o Nucleus contains DNA,information control

    center

    Nucleolus Nuclear Envelope Chromosomeso Cytoplasm area

    between nucleus and cell

    membrane

    o Ribosomes site ofprotein synthesis

    o ER assembly ofcomponents of CM and

    storage of enzymes and

    chemicals

    o Golgi Apparatusprotein/molecule

    modification, packing,

    distribution

    o Chloroplast site ofphotosynthesis

    o Vacuoles storesmaterials

    o Mitochondria site ofcellular respiration

    o Nucleus contains DNA,information control

    center

    Nucleolus Nuclear Envelope Chromosomeso Cytoskeleton supports

    cell structure and cell

    movement

    o Flagella drives cellmovement

    Protein Factories: Ribosomes

    Manufacturers and Shippers: ER &

    GA

    Clean-up Crew: Lysosomes

    Storage Tanks Vacuoles

    Power Stations: Mitochondria &

    Chloroplasts

    Framework: Cytoskeleton

    Microscopy

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    Microscopy study ofobjects or organisms too

    small to be seen by the

    naked eye

    Microscope aninstrument that gives

    enlarged images of the

    object under study

    o Compoundmicroscope

    o ElectronMicroscope

    Compound microscopetwo-way lens system;

    concave brighter, plane

    darker

    Computationso Theoretical

    magnification =

    ocular x objective

    o Diameter = (LPOdiam)(LPO mag)

    = (HPO

    diam)(HPO mag)

    o Cell sizediamter / # of

    cells spanning the

    diameter

    Parts of the microscope:o Eyepieceo LPOo HPOo Stageo Baseo Fine Focuso Coarse

    Adjustment Knob

    oNeck

    o Iris Diaphragm

    o Mirroro Stage clipso Revolving

    nosepiece

    o IlluminatorThe Biology of DiseaseCore Concept 1: Disease

    Disease any change thatinterferes with the

    normal functioning of the

    body

    Core Concept 2: Germ Theory ofDisease

    Germ Theory of Diseasean infectious disease is

    caused by a certain

    disease

    o Robert KochGerman

    Bacteriologist

    o Louis PasteurFrench Chemist

    Core Concept 3: Pathogens

    Pathogen microorganismcausing a certain disease;

    can destroy body cells

    and tissues; can produce

    poisons/toxins that kill

    cells or interfere with

    their functions

    o Viruses non-cellular particles

    invading living

    cells; causes

    AIDS, polio,

    smallpox, measles,

    colds, etc.

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    o Bacteriaunicellular

    prokaryotes;

    causes pneumonia,

    strep throat,

    acne,

    tuberculosis,

    cholera

    o Protists anyeukaryote that is

    NOT a plant, an

    animal or a

    fungus; causesmalaria, amoebic

    dysentery

    o Fungieukaryotic

    heterotrophs

    with chitinous

    CWs; causes

    ringworm,

    athletes foot,

    histoplasmosis

    o Worms parasiticanimals; causes

    tapeworm,

    schistomiasis

    Infectious Diseasedisease caused by the

    entrance of a

    microorganism to the

    body

    Core Concept 4: Kochs Postulates

    Kochs Postulates set ofrules that is used to find a

    specific pathogen causing a

    disease

    oThemicroorganism

    must be found in

    abundance in all

    organisms

    suffering from

    the disease, but

    should not be

    found in healthy

    organisms.

    o Themicroorganism

    must be isolated

    from a diseased

    organism andgrown in pure

    culture.

    o The culturedmicroorganism

    should cause

    disease when

    introduced into a

    healthy organism.

    o Themicroorganism

    must be

    reisolated from

    the inoculated,

    diseased

    experimental host

    and identified as

    being identical to

    the original

    specific causative

    agent.

    Lyme Diseaseo Who: Allen

    Steere of Yale

    University

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    o Where: town ofLyme, state of

    Connecticut

    o Observations: 39 children +

    several adults

    Similar tojuvenile

    arthritis

    Started insummer or

    early fall;

    began as aninsect bite

    followed by

    expanding skin

    rash

    Kochs Postulate 1o Skin rash linked to

    the bite of a deer

    tick

    o Found spiral-shapedbacterium in the

    ticks, Borrelia

    burgodorferi

    o Steere found B.burgodferi in

    patients with

    Lyme disease.

    o HYPOTHESIS: B.burgdorferi causes

    Lyme disease

    Kochs Postulate 2o B. Burgdorferi was

    grown in pure

    culture

    Kochs Postulate 3o

    B. Burgdorferi wasinjected onto mice,

    and developed

    similar symptoms

    to those of

    children

    Kochs Postulate 4o Steere recovered

    B. burgdorferi

    from sick mice

    CONCLUSION: B.burgdorferi is thepathogen causingLyme disease

    Core Concept 5: Modes of Infection Food and Water-borne

    tapeworms, amoebasis

    Airborne droplets ofpathogens expelled into

    the air

    Contact common colds,STDs

    Carriers/Vectorsmosquitoes, tsetse fly

    o Vector anorganism that

    transmits a

    certain disease

    VirusesDiscovery of Viruses

    Tobacco Mosaic Diseasedisease of the plants causing

    it to have patch-like

    patterns

    Adolf Meyer tried to findthe cause of Tobacco Mosaic

    Disease; stated that the

    bacteria is too small to be

    seen even under themicroscope

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    Dmitri Ivanowsky statedthat the bacteria is so small,

    it could penetrate the filter

    or it produces toxin that is

    able to pass through the

    filter

    Martinus Beijerinckdisproved Ivanowskis

    conclusion; stated that the

    infectious agent is capable of

    reproduction and much

    smaller and simpler than

    bacteria Wendell Stanley stated

    that a virus can only

    reproduce in its host, cannot

    be killed by bacteria and is

    much smaller and simpler

    than bacteria

    Definition and Structure of the

    Virus

    Virus non-cellular particlesmade of genetic material

    that invade living cells

    Virion complete virusparticle

    Structure of a Virus:o Nucleic Acid Core

    contains virus genetic

    material

    o Capsid protein coatsurrounding the nucleic

    acid

    o Lipid Envelope lipidbilayer of the virus that

    may conatin spikes

    Shape of a Virus:(determined by its capsid ornucleic acid)

    o Polyhedralo Helicalo Binal

    Structure of Bacteriophages:o Head contains DNA

    molecule

    o Tail used to inject theviral DNA into the host

    cell

    o Tail Fibers used toattach to host

    o Bacteriphage bacteria-eaters

    o Nucleic Acid SNA orRNA, but not both

    o Internal protein Properties of Viruses

    o Non-livingo Non-cellularo Can only reproduce in

    host cell

    o Cause many commonillnesses

    o Ubiquitous Alive when in a host cell,

    considered dormant and

    dies when not in a cell

    Virus Classification

    Viruses may have:(depends on the nature

    and function of the virus)

    o Double-stranded RNAo Double-stranded DNAo Single-stranded DNA, oro Single-stranded RNA

    Size 5 to 300 nm Host specificity depends

    on:

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    o Specific attachment siteson the host cells called

    receptors

    o Availability of cellularfactors required for viral

    multiplication in the host

    cells

    Vaccination and Gene Therapy

    Vaccination discovered byEdward Jenner; exposing

    the body to a milder

    version of a virus may help

    it modify for a strongersickness.

    Gene Therapy processused to cure genetic

    diseases where modified

    viruses are injected into a

    person and goes to the

    defective part of the DNA

    and attaches itself there

    so it can replace it with

    healthier ones.

    Origin of Viruses:

    Scientist cant find theorigin because:

    o Viruses do not formfossils

    Three Main Hypotheses:o Progressive: Hypothesis in

    which a membrane of a

    cell exits it and enters

    another

    o Regressive: Hypothesis inwhich viruses were once

    complex until their

    parasitism caused them

    to lose genetic

    information not related

    to parasitism

    o Virus-First: Hypothesis inwhich viruses were the

    first organisms on Earth

    and they led to the

    formation of the 3

    domains of life

    Virus Reproduction

    Lyctic Cycle culminatesin the death of a host cell

    o Attachmento Penetrationo Synthesis of Viral

    Genomes

    o Assemblyo Release

    Lysogenic Cyclereproduction without

    destroying the host

    o Attachmento Penetrationo Prophageo Reproductiono Spontaneous Induction