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Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District 2003, Prentice Hall Organic Chemistry, 5 th Edition L. G. Wade, Jr.

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Page 1: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5Stereochemistry

Jo BlackburnRichland College, Dallas, TX

Dallas County Community College District2003,Prentice Hall

Organic Chemistry, 5th EditionL. G. Wade, Jr.

Page 2: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 2

Chirality• “Handedness”: right glove doesn’t fit the

left hand.• Mirror-image object is different from the

original object. =>

Page 3: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 3

Stereoisomers• Geometric isomers: cis-trans isomers.• Enantiomers: nonsuperimposable mirror

images, different molecules. =>

cis-1,2-dichlorocyclopentane trans -1,2-dichlorocyclopentane

H

ClH

Cl

H

ClH

ClH

ClCl

H

H

ClCl

H

Page 4: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 4

Chiral Carbons

• Tetrahedral carbons with 4 different attached groups are chiral.

• Its mirror image will be a different compound (enantiomer). =>

Page 5: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 5

Mirror Planes of Symmetry• If two groups are

the same, carbon is achiral. (animation)

• A molecule with an internal mirror plane cannot be chiral.*

Caution! If there is no plane of symmetry, molecule may be chiral or achiral. See if mirror image can be superimposed. =>

Page 6: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 6

(R), (S) Nomenclature

• Different molecules (enantiomers) must have different names.

• Usually only one enantiomer will be biologically active.

• Configuration around the chiral carbon is specified with (R) and (S).

C

CO OH

H3CNH2

H

natural alanine=>

Page 7: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 7

Cahn-Ingold-Prelog Rules• Assign a priority number to each group

attached to the chiral carbon.• Atom with highest atomic number

assigned the highest priority #1.• In case of ties, look at the next atoms

along the chain.• Double and triple bonds are treated like

bonds to duplicate atoms. =>

Page 8: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 8

Assign Priorities

C

CO OH

H3CNH2

H

natural alanine

1

2

3 4

Cl

HCl

H

*

12

34

12

3

4

=>

CC

O

H

CH CH2

CH2OHCH(CH3)2

* CC

C

CH2OHCH(CH3)2

HO

O

C

CH CH2

C

*

expands to

Page 9: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 9

Assign (R) or (S)• Working in 3D, rotate molecule so that

lowest priority group is in back.• Draw an arrow from highest to lowest

priority group.• Clockwise = (R), Counterclockwise = (S)

=>

Page 10: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 10

Properties of Enantiomers• Same boiling point, melting point, density• Same refractive index• Different direction of rotation in polarimeter• Different interaction with other chiral

molecules – Enzymes– Taste buds, scent

=>

Page 11: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 11

Optical Activity• Rotation of plane-polarized light• Enantiomers rotate light in opposite directions,

but same number of degrees.

=>

Page 12: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 12

Polarimetry• Use monochromatic light, usually sodium D

• Movable polarizing filter to measure angle

• Clockwise = dextrorotatory = d or (+)

• Counterclockwise = levorotatory = l or (-)

• Not related to (R) and (S)

=>

Page 13: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 13

Specific RotationObserved rotation depends on the length

of the cell and concentration, as well as the strength of optical activity, temperature, and wavelength of light.

[] = (observed) c l

c is concentration in g/mLl is length of path in decimeters. =>

Page 14: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 14

Calculate []D

• A 1.00-g sample is dissolved in 20.0 mL ethanol. 5.00 mL of this solution is placed in a 20.0-cm polarimeter tube at 25C. The observed rotation is 1.25 counterclockwise.

=>

Page 15: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 15

Biological Discrimination

=>

Page 16: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 16

Racemic Mixtures

• Equal quantities of d- and l- enantiomers.• Notation: (d,l) or ()• No optical activity.• The mixture may have different b.p. and m.p.

from the enantiomers!

=>

Page 17: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 17

Racemic Products

If optically inactive reagents combine to form a chiral molecule, a racemic mixture of enantiomers is formed.

=>

Page 18: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 18

Optical Purity

• Also called enantiomeric excess.• Amount of pure enantiomer in excess of

the racemic mixture.• If o.p. = 50%, then the observed rotation

will be only 50% of the rotation of the pure enantiomer.

• Mixture composition would be 75-25. =>

Page 19: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 19

Calculate % Composition

The specific rotation of (S)-2-iodobutane is +15.90. Determine the % composition of a mixture of (R)- and (S)-2-iodobutane if the specific rotation of the mixture is -3.18.

=>

Page 20: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 20

Chirality of Conformers

• If equilibrium exists between two chiral conformers, molecule is not chiral.

• Judge chirality by looking at the most symmetrical conformer.

• Cyclohexane can be considered to be planar, on average.

=>

Page 21: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 21

Mobile Conformers

H

BrH

Br

H

BrH

Br

Nonsuperimposable mirror images,but equal energy and interconvertible.

BrBr

H H

Use planarapproximation.

=>

Page 22: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 22

Nonmobile ConformersIf the conformer is sterically hindered, it

may exist as enantiomers.

=>

Page 23: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 23

Allenes• Chiral compounds with no chiral carbon

• Contains sp hybridized carbon with adjacent double bonds: -C=C=C-

• End carbons must have different groups.

Allene is achiral.=>

Page 24: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 24

Fischer Projections• Flat drawing that represents a 3D molecule• A chiral carbon is at the intersection of

horizontal and vertical lines.• Horizontal lines are forward, out-of-plane.• Vertical lines are behind the plane.

Page 25: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 25

Fischer Rules

• Carbon chain is on the vertical line.

• Highest oxidized carbon at top.

• Rotation of 180 in plane doesn’t change molecule.

• Do not rotate 90!• Do not turn over out of plane! =>

Page 26: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 26

Fischer Mirror Images

• Easy to draw, easy to find enantiomers, easy to find internal mirror planes.

• Examples:CH3

H Cl

Cl H

CH3

CH3

Cl H

H Cl

CH3

CH3

H Cl

H Cl

CH3=>

Page 27: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 27

Fischer (R) and (S)• Lowest priority (usually H) comes forward, so

assignment rules are backwards!• Clockwise 1-2-3 is (S) and counterclockwise

1-2-3 is (R).• Example:

CH3

H Cl

Cl H

CH3

(S)

(S) =>

Page 28: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 28

Diastereomers

• Stereoisomers that are not mirror images.• Geometric isomers (cis-trans)• Molecules with 2 or more chiral carbons.

=>

Page 29: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 29

Alkenes

Cis-trans isomers are not mirror images, so these are diastereomers.

C CH H

CH3H3C

cis-2-butene trans-2-butene

C CH

H3C

CH3

H =>

Page 30: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 30

Ring Compounds

• Cis-trans isomers possible.

• May also have enantiomers.

• Example: trans-1,3-dimethylcylohexane

CH3

H

H

CH3

CH3

H

H

CH3

=>

Page 31: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 31

Two or More Chiral Carbons• Enantiomer? Diastereomer? Meso? Assign

(R) or (S) to each chiral carbon.• Enantiomers have opposite configurations at

each corresponding chiral carbon.• Diastereomers have some matching, some

opposite configurations.• Meso compounds have internal mirror plane.• Maximum number is 2n, where n = the

number of chiral carbons. =>

Page 32: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 32

ExamplesCOOH

H OH

HO H

COOH

(2R,3R)-tartaric acid

COOH

COOH

HO H

H OH

(2S,3S)-tartaric acid

=> (2R,3S)-tartaric acid

COOH

COOH

H OH

H OH

Page 33: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 33

Fischer-Rosanoff Convention

• Before 1951, only relative configurations could be known.

• Sugars and amino acids with same relative configuration as (+)-glyceraldehyde were assigned D and same as (-)-glyceraldehyde were assigned L.

• With X-ray crystallography, now know absolute configurations: D is (R) and L is (S).

• No relationship to dextro- or levorotatory. =>

Page 34: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 34

D and L Assignments

CHO

H OH

CH2OH

D-(+)-glyceraldehyde

*CHO

H OH

HO H

H OH

H OH

CH2OHD-(+)-glucose

*

COOH

H2N H

CH2CH2COOH

L-(+)-glutamic acid

*=>

Page 35: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 35

Properties of Diastereomers

• Diastereomers have different physical properties: m.p., b.p.

• They can be separated easily.• Enantiomers differ only in reaction with

other chiral molecules and the direction in which polarized light is rotated.

• Enantiomers are difficult to separate. =>

Page 36: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 36

Resolution of Enantiomers

React a racemic mixture with a chiral compound to form diastereomers, which can be separated.

=>

Page 37: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 37

ChromatographicResolution of Enantiomers

=>

Page 38: Chapter 5 Stereochemistry Jo Blackburn Richland College, Dallas, TX Dallas County Community College District  2003,  Prentice Hall Organic Chemistry,

Chapter 5 38

End of Chapter 5