che 240 unit ii chemical reactions, infrared and mass spectroscopy terrence p. sherlock burlington...

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CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

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Page 1: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

CHE 240Unit II

Chemical Reactions, Infrared and Mass

Spectroscopy

Terrence P. SherlockBurlington County College

2004

Page 2: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 2

Tools for Study• To determine a reaction’s

mechanism, look at:Equilibrium constantFree energy changeEnthalpyEntropyBond dissociation energyKineticsActivation energy =>

Page 3: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 3

Chlorination of Methane

• Requires heat or light for initiation.• The most effective wavelength is blue, which

is absorbed by chlorine gas.• Lots of product formed from absorption of only

one photon of light (chain reaction). =>

C

H

H

H

H + Cl2heat or light

C

H

H

H

Cl + HCl

Page 4: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 4

Overall Reaction

C

H

H

H

H Cl+ C

H

H

H

+ H Cl

C

H

H

H

+ Cl Cl C

H

H

H

Cl + Cl

C

H

H

H

H + Cl Cl C

H

H

H

Cl + H Cl =>

Cl Cl + photon (h) Cl + Cl

Page 5: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 5

Termination Steps• Collision of any two free radicals

• Combination of free radical with contaminant or collision with wall.

C

H

H

H

Cl+ C

H

H

H

Cl

Can you suggest others? =>

Page 6: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 6

Equilibrium constant

• Keq = [products] [reactants]

• For chlorination Keq = 1.1 x 1019

• Large value indicates reaction “goes to completion.”

=>

Page 7: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 7

Free Energy Change• G = free energy of (products - reactants),

amount of energy available to do work.• Negative values indicate spontaneity.• Go = -RT(lnKeq)

where R = 1.987 cal/K-moland T = temperature in kelvins

• Since chlorination has a large Keq, the free energy change is large and negative. =>

Page 8: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 8

Factors Determining G• Free energy change depends on

enthalpyentropy

H = (enthalpy of products) - (enthalpy of reactants)

S = (entropy of products) - (entropy of reactants)

G = H - TS =>

Page 9: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 9

Enthalpy

• Ho = heat released or absorbed during a chemical reaction at standard conditions.

• Exothermic, (-H), heat is released.• Endothermic, (+H), heat is absorbed.• Reactions favor products with lowest

enthalpy (strongest bonds). =>

Page 10: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 10

Entropy• So = change in randomness, disorder,

freedom of movement.

• Increasing heat, volume, or number of particles increases entropy.

• Spontaneous reactions maximize disorder and minimize enthalpy.

• In the equation Go = Ho - TSo the entropy value is often small. =>

Page 11: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 11

Bond Dissociation Energy

• Bond breaking requires energy (+BDE)

• Bond formation releases energy (-BDE)

• Table 4.2 gives BDE for homolytic cleavage of bonds in a gaseous molecule.

A B A + B

We can use BDE to estimate H for a reaction. =>

Page 12: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 12

Which is more likely?

Estimate H for each step using BDE.

CH4 HCl+ +Cl CH3

CH3 + Cl2 CH3Cl + Cl

or

Cl+CH4 CH3Cl + H

H Cl2+ HCl Cl+

104 103

58 84

=>

104 84

58 103

Page 13: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 13

Kinetics

• Answers question, “How fast?”

• Rate is proportional to the concentration of reactants raised to a power.

• Rate law is experimentally determined.

=>

Page 14: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 14

Reaction Order• For A + B C + D, rate = k[A]a[B]b

a is the order with respect to Aa + b is the overall order

• Order is the number of molecules of that reactant which is present in the rate-determining step of the mechanism.

• The value of k depends on temperature as given by Arrhenius: ln k = -Ea + lnA RT =>

Page 15: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 15

Activation Energy• Minimum energy required to reach

the transition state.

• At higher temperatures, more molecules have the required energy.

=>

C

H

H

H

H Cl

Page 16: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 16

Reaction-Energy Diagrams• For a one-step reaction:

reactants transition state products

• A catalyst lowers the energy of the transition state.

=>

Page 17: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 17

Energy Diagram for a Two-Step Reaction

• Reactants transition state intermediate• Intermediate transition state product

=>

Page 18: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 18

Rate-Determining Step

• Reaction intermediates are stable as long as they don’t collide with another molecule or atom, but they are very reactive.

• Transition states are at energy maximums.

• Intermediates are at energy minimums.

• The reaction step with highest Ea will be the slowest, therefore rate-determining for the entire reaction. =>

Page 19: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 19

Bromination vs. Chlorination

=>

Page 20: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 20

Endothermic and Exothermic Diagrams

=>

Page 21: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 21

Hammond Postulate• Related species that are similar in energy are

also similar in structure. The structure of a transition state resembles the structure of the closest stable species.

• Transition state structure for endothermic reactions resemble the product.

• Transition state structure for exothermic reactions resemble the reactants. =>

Page 22: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 22

Radical Inhibitors

• Often added to food to retard spoilage.• Without an inhibitor, each initiation step

will cause a chain reaction so that many molecules will react.

• An inhibitor combines with the free radical to form a stable molecule.

• Vitamin E and vitamin C are thought to protect living cells from free radicals. =>

Page 23: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 23

Reactive Intermediates

• Carbocations (or carbonium ions)

• Free radicals

• Carbanions• Carbene

=>

Page 24: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 24

Carbocation Structure

• Carbon has 6 electrons, positive charge.

• Carbon is sp2 hybridized with vacant p orbital. =>

Page 25: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 25

Carbocation Stability• Stabilized by alkyl

substituents 2 ways:• (1) Inductive effect:

donation of electron density along the sigma bonds.

• (2) Hyperconjugation: overlap of sigma bonding orbitals with empty p orbital. =>

Page 26: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 26

Free Radicals

• Also electron-deficient

• Stabilized by alkyl substituents

• Order of stability:3 > 2 > 1 > methyl

=>

Page 27: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 27

Carbanions

• Eight electrons on C:6 bonding + lone pair

• Carbon has a negative charge.

• Destabilized by alkyl substituents.

• Methyl >1 > 2 > 3

=>

Page 28: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 28

Carbenes

• Carbon is neutral.• Vacant p orbital, so

can be electrophilic.• Lone pair of

electrons, so can be nucleophilic.

=>

Page 29: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 29

Types of Spectroscopy

• Infrared (IR) spectroscopy measures the bond vibration frequencies in a molecule and is used to determine the functional group.

• Mass spectrometry (MS) fragments the molecule and measures the masses.

• Nuclear magnetic resonance (NMR) spectroscopy detects signals from hydrogen atoms and can be used to distinguish isomers.

• Ultraviolet (UV) spectroscopy uses electron transitions to determine bonding patterns. =>

Page 30: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 30

The Spectrum and Molecular Effects

=>

=>

Page 31: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 31

Molecular Vibrations

Covalent bonds vibrate at only certain allowable frequencies.

=>

Page 32: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 32

Stretching Frequencies

• Frequency decreases with increasing atomic weight.

• Frequency increases with increasing bond energy. =>

Page 33: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 33

Carbon-Carbon Bond Stretching

• Stronger bonds absorb at higher frequencies:C-C 1200 cm-1

C=C 1660 cm-1

CC 2200 cm-1 (weak or absent if internal)

• Conjugation lowers the frequency:isolated C=C 1640-1680 cm-1

conjugated C=C 1620-1640 cm-1

aromatic C=C approx. 1600 cm-1 =>

Page 34: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 34

Carbon-Hydrogen Stretching

Bonds with more s character absorb at a higher frequency.sp3 C-H, just below 3000 cm-1 (to the right)sp2 C-H, just above 3000 cm-1 (to the left)sp C-H, at 3300 cm-1

=>

Page 35: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 35

An Alkane IR Spectrum

=>

Page 36: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 36

An Alkene IR Spectrum

=>

Page 37: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 37

An Alkyne IR Spectrum

=>

Page 38: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 38

O-H and N-H Stretching

• Both of these occur around 3300 cm-1, but they look different.Alcohol O-H, broad with rounded tip.Secondary amine (R2NH), broad with one

sharp spike.Primary amine (RNH2), broad with two

sharp spikes.No signal for a tertiary amine (R3N) =>

Page 39: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 39

An Alcohol IR Spectrum

=>

Page 40: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 40

An Amine IR Spectrum

=>

Page 41: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 41

Carbonyl Stretching

• The C=O bond of simple ketones, aldehydes, and carboxylic acids absorb around 1710 cm-1.

• Usually, it’s the strongest IR signal.

• Carboxylic acids will have O-H also.• Aldehydes have two C-H signals around

2700 and 2800 cm-1. =>

Page 42: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 42

A Ketone IR Spectrum

=>

Page 43: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 43

An Aldehyde IR Spectrum

=>

Page 44: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 44

O-H Stretch of a Carboxylic Acid

This O-H absorbs broadly, 2500-3500 cm-1, due to strong hydrogen bonding.

=>

Page 45: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 45

Summary of IR Absorptions

=>=>

Page 46: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 46

Strengths and Limitations

• IR alone cannot determine a structure.

• Some signals may be ambiguous.

• The functional group is usually indicated.

• The absence of a signal is definite proof that the functional group is absent.

• Correspondence with a known sample’s IR spectrum confirms the identity of the compound. =>

Page 47: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 47

Mass Spectrometry• Molecular weight can be obtained from a

very small sample.• It does not involve the absorption or

emission of light.• A beam of high-energy electrons breaks

the molecule apart.• The masses of the fragments and their

relative abundance reveal information about the structure of the molecule. =>

Page 48: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 48

Electron Impact Ionization

A high-energy electron can dislodge an electron from a bond, creating a radical cation (a positive ion with an unpaired e-).

e- + H C

H

H

C

H

H

H

H C

H

H

C

H

H

H

H C

H

H

C

H

H

+ H

H C

H

H

C

H

H

H

+=>

Page 49: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 49

Separation of Ions

• Only the cations are deflected by the magnetic field.

• Amount of deflection depends on m/z.

• The detector signal is proportional to the number of ions hitting it.

• By varying the magnetic field, ions of all masses are collected and counted. =>

Page 50: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 50

Mass Spectrometer

=>

Page 51: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 51

The Mass Spectrum

Masses are graphed or tabulated according to their relative abundance.

=>

Page 52: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 52

The GC-MS

=>

A mixture of compounds is separatedby gas chromatography, then identifiedby mass spectrometry.

Page 53: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 53

Molecules with Heteroatoms

• Isotopes: present in their usual abundance.

• Hydrocarbons contain 1.1% C-13, so there will be a small M+1 peak.

• If Br is present, M+2 is equal to M+.

• If Cl is present, M+2 is one-third of M+.

• If iodine is present, peak at 127, large gap.

• If N is present, M+ will be an odd number.• If S is present, M+2 will be 4% of M+. =>

Page 54: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 54

Isotopic Abundance

=>

81Br

Page 55: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 55

Mass Spectrum with Sulfur

=>

Page 56: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 56

Mass Spectrum with Chlorine

=>

Page 57: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 57

Mass Spectrum with Bromine

=>

Page 58: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 58

Mass Spectra of Alkanes

More stable carbocations will be more abundant.

=>

Page 59: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 59

Mass Spectra of Alkenes

Resonance-stabilized cations favored.

=>

Page 60: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 60

Mass Spectra of Alcohols

• Alcohols usually lose a water molecule.

• M+ may not be visible.

=>

Page 61: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 61

Page 62: CHE 240 Unit II Chemical Reactions, Infrared and Mass Spectroscopy Terrence P. Sherlock Burlington County College 2004

Chapter 4 62

POWER POINT IMAGES FROM “ORGANIC CHEMISTRY, 5TH EDITION”

L.G. WADEALL MATERIALS USED WITH PERMISSION OF AUTHOR

PRESENTATION ADAPTED FOR BURLINGTON COUNTY COLLEGEORGANIC CHEMISTRY COURSE

BY:ANNALICIA POEHLER STEFANIE LAYMAN CALY MARTIN