digital tools for academic research

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Digital Tools for Academic Research Sidiropoulos John www.organognosi.com email: [email protected] twitter: @organognosi mobile: +44 7510 570990

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1. Digital Tools for Academic Research Sidiropoulos John www.organognosi.com email: [email protected] twitter: @organognosi mobile: +44 7510 570990 2. The Problem I do not remember where I have read this. Where is this file in my hard drive? I cannot find it! I spend too much time trying to organize my ebooks and papers. I cannot find my notes from the paper I read last week. 3. The Solution:Digital Tools for Academic Research Hypertext Links Wikis Additional/alternative solutions Tags Search engines Databases 4. Hypertext Hypertext is a text structure that cannot be conveniently printed. (As We Will Think - Nelson: 252) The biggest and most well known hypertext system is the World Wide Web (WWW). 5. Links The defining characteristic of hypertext Immediate access to information or data Effective organizational tool Kinds of Links Between different documents Between different sections of the same document Between text files and media files 6. Links between Documents The references in a book or paper can be live links to the original sources e.g. Sorites Paradox and Vagueness - Sidiropoulos Links to local files - e.g. A Critique of Deflationism - Gupta: 286 URL: x-devonthink-item://644047E6-B393 -466E-B4E9-980AB5201172?page=4 Links to Google Books e.g. Vagueness - Willimason: 35 URL: http://books.google.co.uk/ books?id=9ZEB6JNAkKsC&pg=PA35 7. Internal Document Links Clickable table of contents e.g. Hypertext marks in LaTeX: 2 Clickable index e.g. Hypertext marks in LaTeX:448 Clickable endnotes/footnotes e.g. Sorites Paradox and Vagueness - Sidiropoulos: 5 Clickable references to specific PDF pages e.g. Sorites Paradox and Vagueness - Sidiropoulos: 11 8. Links to Audio and Video Files TunesLinker - http://bit.ly/14qlx4k Links to specific files e.g. Night Bird - Deep Forest Links to specific time points e.g. Hypertext and Computer-Augmented- Thought - 11:19 9. Ways of Writing Hypertext HTML (HyperText Markup Language) Wikis LaTeX e.g. Sorites and Vagueness - Sidiropoulos Creation of links using AppleScript e.g. Create MediaWiki and RTF links to iPhoto pictures 10. Wikis The easiest way to create hypertext Demo MediaWiki Links to other pages - e.g. [[Vagueness]] Markup syntax: MediaWiki Cheat Sheet Wiki programs MediaWiki ConnectedText VoodooPad Wikispaces 11. MediaWiki - Tips For each book, article that I read I create a separate wiki page Name template: @Title - Surname For each important concept I create a separate wiki page. Name template: Concept and specifier I insert pertinent tags or categories to the wiki pages. I try to write anything new that I learn. My wikis are the personal repositories of my knowledge. 12. Advantages of Hypertext Every source is just one click away! You can organize your sources, notes and thoughts in an associative manner which can preserve the context. Facilitates the creation of new connections. Facilitates analysis - modular organization of content (imitation of index cards). Facilitates synthesis - creation of dynamic documents (transclusion). 13. Problems with Hypertext The links can break. It requires the learning of new skills (new programs, markup languages) New dangers (security, backup) Digitization of source material Copyright (open access movement) 14. My Favorite Mac Applications for reading and annotating documents: Skim (PDF), Clearview (ePub, chm) for bibliography management: BibDesk for writing: Scrivener, Scapple, LaTeX for notes management: MediaWiki for documents management: DEVONthink (PDFs), Calibre (ePub, chm) for automating my workflow: Script Debugger 15. OrganoGnosi http://www.organognosi.com Development of custom scripts and applications Private tuitions

TRANSCRIPT

Page 1: Digital Tools for Academic Research

Digital Tools for Academic Research

Sidiropoulos Johnwww.organognosi.comemail: [email protected]: @organognosimobile: +44 7510 570990

Page 2: Digital Tools for Academic Research

The Problem

I do not remember where I have read this.

Where is this file in my hard drive?I cannot find it!

I spend too much time trying toorganize my ebooks and papers.

I cannot find my notes from the paper I readlast week.

Page 3: Digital Tools for Academic Research

The Solution:Digital Tools for Academic Research

Hypertext

Links

Wikis

Additional/alternative solutionsTagsSearch enginesDatabases

Page 4: Digital Tools for Academic Research

Hypertext

Hypertext is a text structure that cannotbe conveniently printed. (As We WillThink - Nelson: 252)The biggest and most well knownhypertext system is the World WideWeb (WWW).

Page 5: Digital Tools for Academic Research

Links

The defining characteristic of hypertext

Immediate access to information or data

Effective organizational tool

Kinds of Links

Between different documentsBetween different sections of the samedocumentBetween text files and media files

Page 6: Digital Tools for Academic Research

Links between Documents

The references in a book or paper can be livelinks to the original sourcese.g. Sorites Paradox and Vagueness - Sidiropoulos

Links to local files - e.g. A Critiqueof Deflationism - Gupta: 286URL: x-devonthink-item://644047E6-B393-466E-B4E9-980AB5201172?page=4

Links to Google Bookse.g. Vagueness - Willimason: 35URL: http://books.google.co.uk/books?id=9ZEB6JNAkKsC&pg=PA35

Page 7: Digital Tools for Academic Research

Internal Document Links

Clickable table of contentse.g. Hypertext marks in LaTeX: 2

Clickable indexe.g. Hypertext marks in LaTeX:448

Clickable endnotes/footnotese.g. Sorites Paradox and Vagueness -Sidiropoulos: 5

Clickable references to specificPDF pages e.g. Sorites Paradoxand Vagueness - Sidiropoulos: 11

Page 8: Digital Tools for Academic Research

Links to Audio and Video Files

TunesLinker - http://bit.ly/14qlx4k

Links to specific filese.g. Night Bird - Deep Forest

Links to specific time pointse.g. Hypertext and Computer-Augmented-Thought - 11:19

Page 9: Digital Tools for Academic Research

Ways of Writing Hypertext

HTML (HyperText Markup Language)

Wikis

LaTeXe.g. Sorites and Vagueness - Sidiropoulos

Creation of links using AppleScripte.g. Create MediaWiki and RTF links toiPhoto pictures

Page 10: Digital Tools for Academic Research

Wikis

The easiest way to create hypertextDemo MediaWiki

Links to other pages - e.g. [[Vagueness]]Markup syntax: MediaWiki Cheat Sheet

Wiki programsMediaWikiConnectedTextVoodooPadWikispaces

Page 11: Digital Tools for Academic Research

MediaWiki - Tips

For each book, article that I read Icreate a separate wiki page

Name template: @Title - Surname

For each important concept I create aseparate wiki page.

Name template: Concept and specifier

I insert pertinent tags or categories to thewiki pages.

I try to write anything new that I learn.My wikis are the personal repositoriesof my knowledge.

Page 12: Digital Tools for Academic Research

Advantages of Hypertext

Every source is just one click away!

You can organize your sources, notes andthoughts in an associative manner whichcan preserve the context.

Facilitates the creation of new connections.

Facilitates analysis - modular organizationof content (imitation of index cards).

Facilitates synthesis - creation ofdynamic documents (transclusion).

Page 13: Digital Tools for Academic Research

Problems with Hypertext

The links can break.

It requires the learning of new skills(new programs, markup languages)

New dangers (security, backup)

Digitization of source material

Copyright (open access movement)

Page 14: Digital Tools for Academic Research

My Favorite Mac Applications

for reading and annotating documents:Skim (PDF), Clearview (ePub, chm)

for bibliography management: BibDesk

for writing: Scrivener, Scapple, LaTeX

for notes management: MediaWiki

for documents management:DEVONthink (PDFs), Calibre (ePub, chm)

for automating my workflow:Script Debugger

Page 15: Digital Tools for Academic Research

OrganoGnosi

http://www.organognosi.com

Development of custom scripts andapplications

Private tuitions