dr shane burgess, vice provost and dean, college of agriculture and life sciences (cals), the...
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http://www.catchtalk.tv/events/animalproduction/videos/dr-shane-burgess-vice-provost-and-dean-college-of-agriculture-and-life-sciences-cals-the-university-of-arizonaTRANSCRIPT
SHANE BURGESS PHD VICE PROVOST AND DEAN
COLLEGE OF AGRICULTURE AND LIFE SCIENCES (CALS)
THE UNIVERSITY OF ARIZONA
Cyber-‐Infrastructure: Essen<al for producing the animals we need in the 21st Century
Dr. Shane C. Burgess
Vice Provost & Dean, College of Agriculture and Life Sciences;
Director, Arizona Agricultural Experiment StaMon. [email protected]
Global animal protein consump<on
Source: Data through 2002, FAO and Word Bank
% animal protein of total con
sumed
Gross naMonal income per capita in USD
2009: 1.8B out of 6.8B = 26% 2020: 3.2B out of 7.5B = 43% 2030: 4.9B out of 8.2B= 60%
The world’s increasing middle class
FAO Link: hdp://www.fao.org/economic/esa/esag/en/
Image: hdp://www.sensibletable.com/feeding-‐9-‐billion.aspx#food-‐security-‐defined
-‐5
0
5
10
15
Nutri<onal Supplement
% sc
ore chan
ge com
pared with
con
trol diet
MATH ARTS
SCIENCE
ENGLISH
Adapted from Huled, J.L. 2010, UCLA
Animal-‐derived protein improves childhood cogniMve funcMon as measured by academic performance.
What is Cyberinfrastructure? Connecting Scientists and Computation!
• Experimental Verifiability, Reproducibility, and Provenance!• User Identity Management (Collaborative trust)!• Connections Between Resources!• Multiple Access Levels!• Facilitate Collaborations!
!Democratizing Supercomputing for Research!Liberating High-Throughput Data Acquisition!!
• Integrate!• Software!• Data!
• Scalable !• Data Management !• Computing Resources!hardware, solware, people
Big Problems... 2008
2011
$50M
iPlant Layered Services and Access End Users
Computational Users
Multi-level User Access
Dr. Eric Lyons, UA CALS, SPS
0
50000
100000
150000
200000
250000
300000
350000
1960 1962 1964 1966 1968 1970 1972 1974 1976 1978 1980 1982 1984 1986 1988 1990 1992 1994 1996 1998 2000 2002 2004 2006 2008 2010 2012
US Corn produc<on and the 2012 drought
ConfidenMal
Data monitoring is essen<al in scaled-‐up opera<on of Accordion Photobioreactors to op<mize algae growth, produc<vity, nutrient replenishments, harvest <me, etc.
Dr. Joel Cuellu. UA CALS ABE
Dr Gene Giacomelli UA CALS ABE/SPS
"If it tastes good you should sequence it, you should know what's in the genes of that species.“
Species that taste good is one criterion. Another ..is ..industrial use -‐ raising yields…..or benefits for healthcare.
BGI chief execuMve, Wang Jun
iPlant Data Store!
iPlant!Computational
Resources!
iAnimal!3rd Party!Analytical Software!
Dr. Eric Lyons, UA CALS, SPS
$100M
Salicornia, grown for fodder when green, or as an oilseed when grown to maturity.
Irrigated with the aquaculture effluent from shrimp and Mlapia.
Eritrea aerial image of shrimp-‐Mlapia-‐seaweed-‐halophyte farm
Dr. Kevin Fitzsimmons, UA. Coll. Ag& Life Sciences