felc discussion group november 12, 2013 effects of short chain fatty acids on yeast metabolism...

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© 2013 Verenium Corporation FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi Ph.D. (Verenium)

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Page 1: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

FELC Discussion Group November 12, 2013

Effects of Short Chain Fatty Acids on Yeast Metabolism

Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi Ph.D. (Verenium)

Page 2: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

FELC Discussion Group Nov 2013Discussion Norms

• Please speak kindly and professionally to each other

• Everyone is welcome to offer ideas and suggestions to the topic

• Do not belittle each other

• Learn from each other

Page 3: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

Short Chain Fatty Acids are C1-C5

• What is a short chain fatty acid (SCFA)?

• Usually C1-C5

• Includes formic acid, acetic acid, propionic acid, isobutyric acid, butyric acid, isovaleric acid, valeric acid

• Have individual pKa values to indicate what proportion is in the dissociated (COO-) and undissociated (COOH) form at any pH.

Page 4: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

Short Chain Fatty Acids Have Specific pKas

• In alkaline media (pH >7) COO- form will be prominent

SCFA pKa

Formic acid 3.77

Acetic acid 4.76

Propionic acid 4.87

Isobutyric acid 4.86

Butyric acid 4.82

Isovaleric acid 4.98

Valeric acid 4.82

Page 5: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

Short Chain Fatty Acids Interfere in Yeast Metabolism

• Why are SCFA relevant?

• Seminal paper from 60 years ago describes the effects of acetate and other short chain fatty acids on yeast metabolism

• During early phases of glucose fermentation, phosphate is taken up by starved, mature yeast cells.

• Phosphate accumulation (and thus yeast growth and fermentation) is inhibited by C2, C4, C8 (concentration and pH dependent)

Page 6: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

Effects of Short Chain Fatty Acids on Yeast Metabolism

• Short chain fatty acids influence the fermentative activity of yeast cells

• High concentrations inhibit

• Low concentrations enhance

• Increasing chain length of fatty acid increases inhibitory action

• What are the actions of fatty acids?

• Bactericidal activity

• Inhibit growth rate

• “Glycogen sparring” action in yeast cells

Page 7: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

A pH Increase Can Circumvent Their Effects

• How do they work?

• By binding to enzymes and other proteins in the cell membrane

• How to overcome this?

• If SCFA are coming out of methanator, increase the pH at prop and ferm – this will shift FA to their dissociated forms which cannot enter yeast cell to cause inhibition

• Wash the cells/mash (hexane/ether extraction will remove FA – then analyze by GC)

Page 8: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

SCFAs are Connected to Fusel Oil Inhibition

• SCFA inhibition is connected to fusel inhibition in yeasts

• Fusel oils are

• By-products of ethanol production process

• mix of volatile organic acids, higher alcohols, aldehydes, ketones, fatty acids, esters

• toxic to yeast growth and fermentation

• usually removed using a rectifier distillation column

Page 9: FELC Discussion Group November 12, 2013 Effects of Short Chain Fatty Acids on Yeast Metabolism Moderators: Courtney Ireland (Corn Plus) & Asfia Qureshi

FELC Discussion Group Nov 2013

Thank you for a great discussion!