g. bracco evolution eneagrid/cresco - eera-sp4 bologna 15/5/2013 incontro eera-sp4 bologna 15 maggio...

Download G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Incontro EERA-SP4 Bologna 15 maggio 2013 The evolution of ENEAGRID/CRESCO HPC infrastructure

If you can't read please download the document

Upload: javier-roberds

Post on 14-Dec-2015

215 views

Category:

Documents


1 download

TRANSCRIPT

  • Slide 1

G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Incontro EERA-SP4 Bologna 15 maggio 2013 The evolution of ENEAGRID/CRESCO HPC infrastructure G.Bracco [email protected] ENEA Centro Ricerche Frascati V. Enrico Fermi 45, Frascati (ROMA) S.Migliori,A.Quintiliani,S.Podda,R.Guadagni,F.Ambrosino,F.Beone, M.Caporicci,P.D'Angelo,A.Funel,G.Ponti,G.Furini,A.Mariano, G.Mencuccini,P.Ornelli,A.Perozziello,S.Pierattini,D.Abate,F.Poggi, D.Giammattei,M.DeRosa,S.Pecoraro,F.Simoni,S.Giusepponi, G.Guarnieri,A.Petricca,A.Rocchi,C.Sci,A.Italiano, A.Colavincenzo,G.Giannini Slide 2 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE The scientific computing resources of ENEA [The Italian National Agency for New Technologies,Energy and Sustainable Economic Development] are integrated in ENEAGRID infrastructure, a production quality, service oriented system for high performance and high throughput computing. The main computing resources are the CRESCO clusters (Linux x86_64), the main site is Portici (NA), the location of the original CRESCO project (2008, Computational RESearch center for COmplex systems), funded by the Italian Minister of Research and the Education,in the framework of PON 2000-2006. This presentation describes the infrastructure and illustrates its evolution as funded by the new projects (PON 2007-2013 framework) where ENEA-UTICT, the ICT Unit of ENEA, is one of the partners. Overview Slide 3 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Outline ENEAGRID The architecture & the computing resources Users and applications User interface and Virtual Labs CRESCO clusters New projects PON 2007-2013 IT@CHA, TEDAT, LAMRECOR New infrastructures CRESCO3 CRESCO4 Conclusions Slide 4 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE The infrastructure is based on mature multiplatform software components assuring reliability and easy administration. Web interfaces have been developed/customized for a friendly user environment: Kerberos 5 authentication File systems: AFS/OpenAFS geographic file system (HOME) GPFS: parallel file system (also WAN) Resource manager: LSF Multicluster User Web graphical interface: NX/FARO Jobrama: job monitoring & Accounting System monitoring: Zabbix Web management of users/projects: WARC ENEAGRID architecture Slide 5 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE ENEAGRID offers to the users computing resources based on Linux x86_64 ( ~5800 cores), AIX SP5 (~256 cpu), special systems (e.g. GPUs), virtualized hosts and distributed storage. The resources are located in 6 sites, connect by GARR network. ENEAGRID: computing resources ENE Slide 6 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE ENEAGRID users: serial or small scale parallel jobs: ~200 users large scale HPC parallel jobs: ~50 users Application domains: combustion CFD aerospace CFD computational chemistry climate modeling atmospheric pollusion diffusion simulation nuclear technologies nuclear fusion physics bioinformatics ... ENEAGRID: users and applications Slide 7 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO utilization by domain of activity Combustion CFD621.87ENEA New materials531.9ENEA, INFN/RM, INFN/NA,UniFI,UniSaUniSS, Numonyx Climate modeling357.57ENEA,Ylichron Nuclear fission122.9ENEA,ISS HPC Support activity103.11ENEA Atmospheric pollution65.62ENEA,AriaNet Aerospace CFD32.77Avio,AAPS,UniROMA1 University22.13UniROMA1,CERI Nuclear fusion19.99ENEA,PoliTo Bioinformatics18.3ENEA, CNR-ITB, Ylichron,CNR-ISA EFDA- Fusion4.69ENEA,EFDA Industry0.37NICE,CETMA Slide 8 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 FARO - Fast Access to Remote Objects Web access to data, applications and virtual machines, a solution based on the integration of NX and a java interface Slide 9 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 FARO & Virtual Labs Thematic portals integrating the access to data and to the applications for a specific contex/activity Slide 10 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Virtual Labs (1) Slide 11 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Virtual Labs (2) Slide 12 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Virtual Labs (3) Slide 13 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Virtual Labs (4) Slide 14 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Virtual Labs (5) Slide 15 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Total displacement (mm ) Pos t Processo r Total displacement (mm ) Total displacement (mm ) Pos t Processo r Pos t Processo r FARO: 3D visualization 3D Remote Rendering Slide 16 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 HPC: scalability test of various applications Fluent OpenFoam Commercial code Combustion Open Source: OpenFoam Processors User Code procs cpmd Slide 17 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO clusters >Portici CRESCO1(672 cores 4U) CRESCO2(2720 cores blades HS21,GPFS) IB CISCO 70xx, DDR Intel Clovertown,Tigerton,Nehalem,Westmere >Casaccia CRESCOC (192 cores, twin 1U,Supermicro) IB Qlogic Silverstorm DDR, AMD 2427 Istanbul >Frascati CRESCOF (480 cores twin square 2U, GPFS) IB Qlogic 12300 QDR, AMD 6172 Magnycours >Brindisi CRESCOB (80 cores, 4 U, GPFS) GEthernet, Intel Tigerton >Trisaia CRESCOT (16 cores,4U) Intel Tigerton Slide 18 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO1/2 Clusters - DDR IB & Storage SFS-7000D(D) SFS-7000D (e) SFS 7000D SFS-7024-288P 4 graphic FRONT END 2X GPFS NODE SFS 7012-144-P 4X FRONT END FC (2) 4 4 4 4 42 X 3850M2 10 X 3755 340 X HS21 SECTION 2 SM (ACTIVE) SM (standby 4 4 4 X FRONT END GRAFICI 4X FRONT END 2X GPFS NODE 4) 4 4 2) 4 BACK-UP 4 IBM DCS 9550 -180TBDDN S2A9900 120TB 2X GPFS NODE IB 36 ports 4 20 TB Server STORAGE 20 TB Server STORAGE 20 TB Server STORAGE 20 TB Server STORAGE CRESCO2 Storage: IBM/DDN9550 120 TB; DDN9900 90 TB; disk servers 80 TB CRESCO1 Slide 19 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 New projects : PON 2007-2013 PON/1 Ricerca Industriale DDR MIUR 01/Ric 18/1/2010 IT@CHA - (application of new technologies to the conservation and valorization of cultural and artistic heritage) LAMRECOR - (Advanced logistics for persons and goods) DIRECTFOOD - Gestione integrata filiere alimentari e canali innovativi produttore -consumatore PON/2 Distretti/Laboratori Pubblico Privati DDR MIUR 713/Ric 29/10/2010 VIS4FACTORY - Sistemi Informativi Visuali per i processi di fabbrica nel settore dei trasporti DATABENC - Distretto ad ALta Tecnologia per i beni culturali nella regione Campania PON/3 Infrastrutture DDR MIUR 254/Ric 18/5/2011 TEDAT - Centro di eccellenza per le Tecnologie e la diagnostica avanzata nel settore dei trasporti (Advanced technologies for transport,new materials for aerospace, automotive,..) Slide 20 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 PON 2007-2013: Projects started 2012 Budget for infrastructures: IT@CHA [Ricerca industriale] ENEA-UTICT 320 k LAMRECOR [Ricerca industriale] ENEA-UTICT 548 k On these projects: new CRESCO3 cluster TEDAT [Infrastrutture] ENEA-UTICT 2.221 k Portici (2.056 k) Brindisi (165 k) On this project: new CRESCO4 cluster Slide 21 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Portici: new cluster CRESCO3 In the framework of IT@CHA and LAMRECOR projects the new CRESCO3 cluster has been set up in CRESCO computer room: 84 AMD nodes, 2016 cores, Twin Square SuperMicro & Acer, 19.3 TFlops peak Infiniband QDR QLogic 12800-040 (96 ports) 2 Racks (wide) The cluster has been recently opened to a subset of users for testing purposes and will be soon opened for general use. HPL Benchmark: 75 % efficiency; compilers with Interlagos support (Open64 specific flags, Intel 12 specific flags; ACML Libraries) Storage: DDN S2A9900 600 TB; GPFS Slide 22 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE AMD Iterlagos 6234 2.4 GHz,64 GB,24 cores,84 nodes,2016 cores CRESCO3:SMicro/Acer twinsquare QDR IB Slide 23 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Portici: CRESCO4 cluster In the framework of TEDAT project the procurament of the new CRESCO4 cluster is currently under way. An European tender has been set up,evaluated and the contract has been awarded (E4 Company). 304 computing nodes Intel E2670, 2.6 GHz, 4864 cores Supermicro Fat-Twin chassis (8 nodes in 4U) 101 TFlops Peak 5 Racks for computing nodes, 1 network rack Storage: DDN S2A9900 600 TB Infiniband QDR QLogic/Intel 12800-180 (432 ports) New computer room Conditioning system taking advantage of free cooling technogy Delivered in Portici by July 2013 Fineal test completed at October 2013 Slide 24 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE Portici: CRESCO4 - IB network Slide 25 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE Computer rooms: CRESCO & CRESCO4 CRESCO computer room new CRESCO4 computer room Slide 26 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO computer room (1) Slide 27 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO computer room (2) Slide 28 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO4 computer room (1) Slide 29 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO4 computer room (2) Slide 30 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO4 computer room (3) Slide 31 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO4 computer room (4) Slide 32 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE CRESCO4 computer room (5) Slide 33 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 ENE Conclusions A significant update of the ENEAGRID HPC infrastructure is currently under way, with the new CRESCO3 and CRESCO4 clusters, funded by several PON 2007-2013 projects The architecture of ENEAGRID provides the framework for an easy introduction of the new computing resources both from the point of view of the user and the administrator. By the end of the year the integrated peak computing power of ENEAGRID will increase of a factor 5 up to ~150 Tflops, the most powerfull system being CRESCO4 with ~100 Tflops. Slide 34 G. Bracco Evolution ENEAGRID/CRESCO - EERA-SP4 Bologna 15/5/2013 Links www.enea.it www.enea.it www.cresco.enea.it www.cresco.enea.it www.eneagrid.enea.it www.eneagrid.enea.it www.afs.enea.it www.afs.enea.it