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Genetic Engineering I

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Page 1: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Genetic Engineering I

Page 2: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Nucleotides

• Building blocks of DNA and RNA

• DNA– Genetic material– “information” storage

• RNA– Structural and information expression– Catalysis– Probable first biopolymer

Page 3: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Terminology

• Bases– Nitrogen containing ring

• Nucleoside– Base attached to sugar

• Nucleotide– Nucleoside + phosphate

• Nucleic Acid– Polymers of nucleotides

Page 4: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression
Page 5: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

A nice, convenientnumbering scheme?

Polymerize at 5’and 3’ positions

DNA is deoxy at2’ position

Page 6: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Common Bases

DNA vs. RNA

Page 7: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression
Page 8: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

A=T or A=U pairsG=C pairs

What is effect of high GC content?

Page 9: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

B DNA

Other forms exist

Page 10: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Biotechnology

• The discovery of restriction endonucleases (enzymes) was essential to the development of biotechnology.– Cleave at specific DNA sequences

• hundreds to thousands of bp separation

– Usually recognizes a palindromic sequence– Likely part of a host defense mechanism *– Allows you to cut and paste pieces of DNA

Page 11: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression
Page 12: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

New England Biolabs

• http://www.neb.com/

• rebase

Page 13: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression
Page 14: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Plasmids

Page 15: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression

Today:Satellite DNAfrom E. coli picked from gel

Page 16: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression
Page 17: Genetic Engineering I. Nucleotides Building blocks of DNA and RNA DNA –Genetic material –“information” storage RNA –Structural and information expression