kindvall, oskar lect03a

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Names and Taxonomic Concepts Uses of names and taxonomic information Oskar Kindvall

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Oskar Kindvall (first) lecture on Tuesday, Sept 15, 2009, for the Biodiversity Informatics Course, a Swedish Taxonomy Initiative (Svenska Artprojektet) course at the Swedish Natural History Museum, Stockholm, supported by the Swedish Species Service (ArtDatabanken) and the Swedish GBIF node.

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Page 1: Kindvall, Oskar Lect03a

Names and Taxonomic ConceptsUses of names and taxonomic information

Oskar Kindvall

Page 2: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 3: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 4: Kindvall, Oskar Lect03a

Retrieving data related to a particular taxon

• When the taxon and its name is known• When the taxon is known but the proper

name or spelling is only vaguely known• When the taxon is not known• When the taxonomy change over time• When the taxonomy differ between data

sources

Page 5: Kindvall, Oskar Lect03a

Retrieving data related to a particular taxon

• When the taxon and its name is known• When the taxon is known but the proper

name or spelling is only vaguely known• When the taxon is not known• When the taxonomy change over time• When the taxonomy differ between data

sources

Page 6: Kindvall, Oskar Lect03a

Retrieving data related to a particular taxon

• When the taxon and its name is known• When the taxon is known but the proper

name or spelling is only vaguely known• When the taxon is not known• When the taxonomy change over time• When the taxonomy differ between data

sources

Page 7: Kindvall, Oskar Lect03a

Retrieving data related to a particular taxon

• When the taxon and its name is known• When the taxon is known but the proper

name or spelling is only vaguely known• When the taxon is not known• When the taxonomy change over time• When the taxonomy differ between data

sources

Page 8: Kindvall, Oskar Lect03a

time

Kindvall oskar

Kindvall annika

Kindvall oskar oskar

Kindvall oskar knut

Kindvall annika

Kindvall knut

Page 9: Kindvall, Oskar Lect03a

time

Species B

Species A

Subspecies Ba

Subspecies Bb

Species C

Species Bb

Kindvall oskar

Kindvall annika

Kindvall oskar oskar

Kindvall oskar knut

Kindvall annika

Kindvall knut

Page 10: Kindvall, Oskar Lect03a

time

Species B

Species A

Subspecies Ba

Subspecies Bb

Species C

Species Bb

Kindvall oskar

Kindvall annika

Kindvall oskar oskar

Kindvall oskar knut

Kindvall annika

Kindvall knut

Retrieve data for the Taxon list {A, B, Ba, Bb, C} as a single taxon

Page 11: Kindvall, Oskar Lect03a

Retrieving data related to a particular taxon

• When the taxon and its name is known• When the taxon is known but the proper

name or spelling is only vaguely known• When the taxon is not known• When the taxonomy change over time• When the taxonomy differ between data

sources

Page 12: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 13: Kindvall, Oskar Lect03a

Retrieving data related to a list of taxa

• All taxa within a taxonomic group• All taxa of a certain type (e.g. species) within a

taxonomic group• An arbitrary list of taxa

Page 14: Kindvall, Oskar Lect03a

Retrieving data related to a list of taxa

• All taxa within a taxonomic group• All taxa of a certain type (e.g. species) within a

taxonomic group• An arbitrary list of taxa

Page 15: Kindvall, Oskar Lect03a

Retrieving data related to a list of taxa

• All taxa within a taxonomic group• All taxa of a certain type (e.g. species) within a

taxonomic group• An arbitrary list of taxa

Page 16: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 17: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 18: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 19: Kindvall, Oskar Lect03a

TaxonId Taxon category Scientific name Author Swedish name Family Order Class Phylum Landscape Redlist category Sort order

2000897Family Acrididae markgräshoppor Acrididae Orthoptera Insecta Arthropoda 34340

1000100Subfamily Melanoplinae Acrididae Orthoptera Insecta Arthropoda 34341

1000097Genus Podisma Berthold, 1827 Acrididae Orthoptera Insecta Arthropoda 34342

200020Species Podisma pedestris (Linnaeus, 1758) skogsgräshoppa Acrididae Orthoptera Insecta Arthropoda S LC 34343

1000098Genus Melanoplus Stål, 1873 Acrididae Orthoptera Insecta Arthropoda 34344

200021Species Melanoplus frigidus (Boheman, 1846) fjällgräshoppa Acrididae Orthoptera Insecta Arthropoda F LC 34345

1000101Subfamily Locustinae Acrididae Orthoptera Insecta Arthropoda 34346

1000103Genus Psophus Fieber, 1853 Acrididae Orthoptera Insecta Arthropoda 34347

101656Species Psophus stridulus (Linnaeus, 1758) trumgräshoppa Acrididae Orthoptera Insecta Arthropoda J EN 34348

1000104Genus Locusta Linnaeus, 1758 Acrididae Orthoptera Insecta Arthropoda 34349

200023Species Locusta migratoria (Linnaeus, 1758) europeisk vandringsgräshoppa Acrididae Orthoptera Insecta Arthropoda HJ NA 34350

1000105Genus Oedipoda Serville, 1831 Acrididae Orthoptera Insecta Arthropoda 34351

200024Species Oedipoda caerulecens (Linnaeus, 1758) blåvingad sandgräshoppa Acrididae Orthoptera Insecta Arthropoda HJ NA 34352

1000106Genus Bryodema Fieber, 1853 Acrididae Orthoptera Insecta Arthropoda 34353

100513Species Bryodema tuberculata (Fabricius, 1775) rosenvingad gräshoppa Acrididae Orthoptera Insecta Arthropoda J VU 34354

1000107Genus Sphingonotus Fieber, 1852 Acrididae Orthoptera Insecta Arthropoda 34355

101809Species Sphingonotus caerulans (Linnaeus, 1767) blåvingad gräshoppa Acrididae Orthoptera Insecta Arthropoda HJ LC 34356

1000108Genus Mecostethus Fieber, 1852 Acrididae Orthoptera Insecta Arthropoda 34357

200027Species Mecostethus grossus (Linnaeus, 1758) kärrgräshoppa Acrididae Orthoptera Insecta Arthropoda V LC 34358

1000102Subfamily Gomphocerinae Acrididae Orthoptera Insecta Arthropoda 34359

1000109Genus Chrysochraon Fischer, 1853 Acrididae Orthoptera Insecta Arthropoda 34360

100633Species Chrysochraon dispar (Germar, 1831-35) guldgräshoppa Acrididae Orthoptera Insecta Arthropoda JV NT 34361

1000110Genus Omocestus Bolivar, 1878 Acrididae Orthoptera Insecta Arthropoda 34362

200029Species Omocestus viridulus (Linnaeus, 1758) grön ängsgräshoppa Acrididae Orthoptera Insecta Arthropoda JSUV LC 34363

200030Species Omocestus ventralis (Zetterstedt, 1821) rödgumpgräshoppa Acrididae Orthoptera Insecta Arthropoda J LC 34364

200031Species Omocestus haemorrhoidalis (Charpentier, 1825) alvargräshoppa Acrididae Orthoptera Insecta Arthropoda J LC 34365

1000111Genus Stauroderus Bolivar, 1898 Acrididae Orthoptera Insecta Arthropoda 34366

101819Species Stauroderus scalaris (Fischer-Waldheim, 1846) skärrande gräshoppa Acrididae Orthoptera Insecta Arthropoda JS NT 34367

1000112Genus Chorthippus Fieber, 1852 Acrididae Orthoptera Insecta Arthropoda 34368

200035Species Chorthippus apricarius (Linnaeus, 1758) solgräshoppa Acrididae Orthoptera Insecta Arthropoda JU LC 34369

100632Species Chorthippus dorsatus (Zetterstedt, 1821) sydängsgräshoppa Acrididae Orthoptera Insecta Arthropoda J LC 34370

200033Species Chorthippus brunneus (Thunberg, 1815) backgräshoppa Acrididae Orthoptera Insecta Arthropoda JSU LC 34371

200034Species Chorthippus biguttulus (Linnaeus, 1758) slåttergräshoppa Acrididae Orthoptera Insecta Arthropoda JU LC 34372

200036Species Chorthippus albomarginatus (De Geer, 1773) strandängsgräshoppa Acrididae Orthoptera Insecta Arthropoda JUV LC 34373

200038Species Chorthippus parallelus (Zetterstedt, 1821) kortvingad ängsgräshoppa Acrididae Orthoptera Insecta Arthropoda JUV LC 34374

200039Species Chorthippus montanus (Charpentier, 1825) myrgräshoppa Acrididae Orthoptera Insecta Arthropoda V LC 34375

200042Subspecies Chorthippus montanus ssp. fennoscandicus Ander, 1945 Acrididae Orthoptera Insecta Arthropoda 34376

1000113Genus Myrmeleotettix Bolivar, 1914 Acrididae Orthoptera Insecta Arthropoda 34378

200040Species Myrmeleotettix maculatus (Thunberg, 1815) liten klubbsprötgräshoppa Acrididae Orthoptera Insecta Arthropoda HJS LC 34379

1000114Genus Gomphocerus Thunberg, 1815 Acrididae Orthoptera Insecta Arthropoda 34380

200041Species Gomphocerus rufus (Linnaeus, 1758) stor klubbsprötgräshoppa Acrididae Orthoptera Insecta Arthropoda JSU LC 34381

Page 20: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 21: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 22: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 23: Kindvall, Oskar Lect03a

Practical uses• Retrieving data related to a particular taxon• Retrieving data related to a list of taxa• Taxon counts• Taxon lists• Lists of taxon observations• Taxon relationships • Taxon trees• Checking taxonomic lists

Page 24: Kindvall, Oskar Lect03a