motif finding

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Motif finding

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Motif finding. Stat2 120m. E-value5.1e-202 Width16 Sites148 (200 peaks used). Jaspar Stat1 motif. Stat1 120 m. E-value5.9e-319 Width16 Sites198 (200 peaks used). Jaspar Stat1 motif. Irf1 (120 min). -value3.3e-130 Width16 Sites74 (200 peaks used). Jaspar Irf1 Motif. - PowerPoint PPT Presentation

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Page 1: Motif finding

Motif finding

Page 2: Motif finding

Stat2 120m

E-value 5.1e-202Width 16Sites 148 (200 peaks used)

Jaspar Stat1 motif

Page 3: Motif finding

Stat1 120 m

Jaspar Stat1 motif

E-value 5.9e-319Width 16Sites 198 (200 peaks used)

Page 4: Motif finding

Irf1 (120 min)

-value 3.3e-130Width 16Sites 74 (200 peaks used)

Jaspar Irf1 Motif

Page 5: Motif finding

Ctcf 30 min

E-value 3.5e-244Width 15Sites 176 (200 peaks used)

Jaspar Ctcf motif

Page 6: Motif finding

PU.1 120m

E-value 2.7e-391Width 13Sites 271 (200 peaks used)

PU.1 Transfac

Page 7: Motif finding

cFos 120 m

E-value 1.8e-215Width 15Sites 108 (200 peaks used)

Jaspar Hap3 motif Jaspar NfyA motif

Motif 3E-value 1.3e-002Width 11Sites 24 (200 peaks used)

Page 8: Motif finding

Atf3 120 m

E-value 5.6e-197Width 16Sites 162 (200 peaks used)

Transfac Atf1 motif Jaspar Creb1 motif

Page 9: Motif finding

Cebpb 120 m

Transfac Cebpb motif

E-value 4.3e-056Width 11Sites 127 (200 peaks used)

Page 10: Motif finding

cRel 120m

E-value 5.0e-011Width 11Sites 43 (200 peaks used)

Transfac NF-kappa-B motif Transfac crel motif

Page 11: Motif finding

E2f4 120m

Transfac E2f1

Motif 1

Motif 2E-value 7.5e-014Width 13Sites 36 (200 peaks used)

Motif 1E-value 2.6e-053Width 16Sites 85 200 peaks used

Transcfac NF-YJasper NFYA

Motif 2

Page 12: Motif finding

Relb 120m

Transfac Rel

Motif 3

E-value 1.3e+000Width 16Sites 26 (200 peaks used)

Page 13: Motif finding

Nrf2 120mMotif 1E-value 7.2e-028Width 16Sites 17 200 peaks used

Jaspar Rpn4

Motif 2

Motif 3E-value 1.9e-002Width 11Sites 10 (200 peaks used)

Motif 2E-value 3.9e-007Width 15Sites 10 (200 peaks used)

Jaspar Atf2

Motif 3