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Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

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Page 1: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Peri-natal survival of pigletsunderstanding and genetics

Lauren Christian Endowed Lecture

Egbert F. Knol

Page 2: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Road map

Challenge• Our business is efficient pork production• Our responsibility is to maintain animal integrity• Pork chain mortality is out of bounds in many situations

Peri-natal survival: • Basics• Genetics• Piglet side : vitality• Nurse sow side : mothering ability

Genomics will helpMission for all of us

Page 3: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Challenge

Page 4: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Our business

FARROW

FINISHFEED PORK

Page 5: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Efficiency

FARROW

FINISHFEED PORK

PORK

FE =-----------

FEED

Page 6: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Losses on the way

FARROW FINISHFEED PORK

Losses drain efficiency; feed is invested, but not harvested

††

†††

††

††

Page 7: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

GOOD: 12 weaned

FARROW FINISHGestation lactation nursery finishing

LOSSES30 ova shed

15 piglets born1 stillborn

14.3% PWM 2% nursery

5% sow mortality 3% finishing

76% of total born reaches plant

Page 8: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

GOOD: 12 weaned

FARROW FINISHGestation lactation nursery finishing

LOSSES

30 ova shed

15 piglets born

Crowding? Selection for increased litter size overdone?(Canada, university of Alberta, Foxcroft et al.)

Page 9: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

GOOD: 12 weaned

FARROW FINISHGestation lactation nursery finishing

LOSSES30 ova shed

15 piglets born1 stillborn

14.3% PWM 2% nursery

20% peri-natal mortality in a good situation

Page 10: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

GOOD: 12 weaned

FARROW FINISHGestation lactation nursery finishing

farrowing survival

preweaning survival

Correlated responses backward and forward

Page 11: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Added challenge

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1995 2000 2005 2010 2015 2020 2025 2030 2035

Hours spent per piglet in a farrowing unit

Hou

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Year

Page 12: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Basics

Page 13: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Modeling of test farm

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Bell curve is birth weight distribution

S – curve is Survival curve

Weight (kg)

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Page 14: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Increasing birth weight

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Page 15: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Reducing variation

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Page 16: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Increasing survival

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Page 17: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Duroc (black) against Pietrain

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Birth weight

Preweaning survival

Page 18: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Sire differences

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>350 offspring each

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2 lbs 4 lbs

Page 19: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Genetics of survival

Page 20: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Death: whom to blame?

Genes of the piglet?

Genes of the sow?

Genes of the foster?

Page 21: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Genetic models

Classic approach• Litter mortality = HYS + sow (+ error)• Litter survival = HYS + service sire + sow

Improved (still recording at litter level)• Litter survival = HYS + service sire + sow

Our perception• Piglet survival = HYS + f(BW) + animal + dam + foster• Animal = piglet vitality, • Dam = uterine quality and • Foster = mothering ability

Page 22: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Piglet weighing

> 500,000 piglets per per year

Page 23: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Validation: 100 low against 100 high EBV litters

Low EBV

High EBV

Expected survival 78 % 82 % Realized survival Litter size Birth weight Variation in birth weight

Page 24: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Validation: 100 low against 100 high EBV litters

Low EBV

High EBV

Expected survival 78 % 82 % Realized survival 78.0 % 81.1 % Litter size Birth weight Variation in birth weight

Page 25: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Validation: 100 low against 100 high EBV litters

Low EBV

High EBV

Expected survival 78 % 82 % Realized survival 78.0 % 81.1 % Litter size 12.4 12.4 Birth weight 1500 1470 Variation in birth weight 301 291

Page 26: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Piglet vitalityThe animal effect from the model

Page 27: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Why does it work?

• 25 high EBV gilts mated to high EBV boars• 25 low low

• All 50 caesarian sectioned 2 days before farrowing, placentae weighed

• All 650 piglets fully dissected

• Organs weighed, length of intestinal tract, blood parameters etc. etc.

• More vital: heavier livers, more glycogen (P=0.04)

Page 28: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Blue: high EBV litters

0 50 100 150 200 250 300 350 400 450 500

Weight placenta

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Jascha Leenhouwers en Tette van der Lende

Page 29: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

High EBV littersmore cortisol

Table 5. Estimates and P-values for relationships of blood characteristics with EBVps of thelitter

Litter average Within-littervariationb

Characteristic Estimatea P-value Estimatea P-valueHematocrit, % 0.08 0.41 0.06 0.12Plasma venous glucose, mg/100 mL 0.14 0.62 -0.03 0.75Plasma arterial glucose, mg/100 mL 0.11 0.70 -0.03 0.77Serum estradiol-17ß, ng/mL -0.01 0.51 -0.003 0.71Serum cortisol, ng/mL 1.72 0.0001 0.16 0.53aEstimates indicate the increase or decrease in the respective characteristic with every percentage increase in EBVpsbcalculated as within-litter standard deviation

Jascha Leenhouwers, JAS 2002

Page 30: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Stronger piglets, not heavier!

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Page 31: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Mothering abilityFoster effect from the model

Page 32: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

What do we LIKE in a sow

• Quiet • Attentive• Enough teats• Quality of teats• Enough milk• Uniformity at birth and at weaning• Maintenance of body condition• ....

Lots of grad students needed…

Or: use EBV for mothering ability

Page 33: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

1. Visual scan sampling

• 4 hours walking through farrowing rooms

• Visually ‘Scanning’ each sow every 5 minutes

• 5 observation days (days -2, 0, 7, 14)

• 80 sows, 150 traits

Page 34: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Position

Page 35: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Behaviour

Page 36: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

2. Open field test

Page 37: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

3. Aggression test

Page 38: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

4. Questionnaire

Tattoo number 89BE65

Farrowing date 23 – 03 – 200 6

Aggressive to people X

Aggressive to piglets

No care for piglets

Fearful during handling X

Udder quality Birth 3 weeks

Number of teats 14

Regularity (low-high) 1 X 3 4 5

Litter quality Birth 3 weeks

Weight (low-high) 1 2 3 X 5 1 2 X 4 5

Uniformity (low-high) 1 X 3 4 5 1 2 X 4 5

Page 39: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Results: 1. Scan sampling

Sows with high EBV-MA:

• Less changes of posture

• Less activity

• Less in sitting position

Page 40: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Results: 2. Open field test

Sows with high EBV-MA:

• More exploring behaviour in open field

Page 41: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Results: 3. Aggression test

Sows with high EBV-MA:

• More lying laterally

• More vocalisation

• Less aggression (biting plush piglet)!!!

Page 42: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Results 4. Questionnaire

h² SD rg MA2

Aggressive to people 0.05 0.06

Aggressive to piglets 0.16 0.07

Fearful during treatment 0.06 0.07

Aggression + fear 0.12 0.07 -0.63

No care for piglets 0.03 0.05

Weight at birth 0.26 0.09 -0.03

Weight at weaning 0.22 0.08 0.12

Uniformity at birth 0.10 0.07 0.91

Uniformity at weaning 0.13 0.07 0.72

Regularity udder 0.10 0.07 0.16

Number of teats 0.21 0.08 0.38

Page 43: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Conclusion

Statistical model results in what we want:

• Quiet • Attentive• Enough teats• Quality of teats• Uniformity at birth and at weaning

No need for grad students here

Page 44: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Implementation in breeding program

Page 45: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

EBV estimation

TR TR-NAME N-OBS MEAN SD MINIMUM MAXIMUM -------------------------------------------------------------------- 1 far. Surv. 4,216,879 92.942 25.612 0.0000 100.00 2 pws 3,904,329 89.438 30.735 0.0000 100.00 3 # teats 2,033,561 14.372 1.0220 1.0000 27.000 4 birth w. 475,147 1.4390 0.25681 0.51000 2.3900 5 uniformity 459,589 260.76 101.07 11.000 1189.0 6 longevity1 1,457,902 0.91772 0.27479 0.0000 1.0000 7 longevity5 1,214,124 3.9455 1.3778 1.0000 5.0000 8 age insem. 1,459,539 253.07 27.742 181.00 364.00 9 total born 6,520,197 12.583 3.3264 1.0000 30.000 10 stillborn 6,532,251 0.45817 0.56757 0.0000 3.2960 11 pwm 5,229,186 10.945 15.418 0.0000 100.00 12 interval 1,314,214 19.409 39.550 0.0000 100.00 13 gestation 6,492,273 115.13 1.6689 105.00 125.00

2 million piglets with underline count

4 million piglets weighed

1.2 million sows

Page 46: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

corr

old new old new

survival 1742 2246 0.57 0.73 0.84

number total born 425 455 1.02 1.09 1.00average litter birth weight 840 1146 1.01 0.99 0.99litter variation 230 228 0.96 0.88 0.99gestation length 629 643 0.98 1.02 1.00

F- value estimate

Validation

1 take out 10,000 records

2 estimate breeding values on the remaining data

3 predict the 10,000

4 expected b-value should be 1.00

Page 47: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

General conclusions

• Survival: management = selection

• Survival selection: hard work, but feasible

• Most genetic companies select, be it with different tools

• Faster than economic progress should be an option

• Longer gestation, lower variation in bw, but not higher bw

Next table closer than you might expect

Page 48: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

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Labour per piglet produced

Page 49: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Miranda’s slide, quoted by Foxcroft in Banff

Page 50: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Validation of this graph: 2 extreme sows

y = -0.0349x + 1.8968

R2 = 0.2437

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Page 51: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Andreia’s slide on variation

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outlier

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Page 52: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol
Page 53: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

y = -0.0475x + 2.005

R2 = 0.2548

y = -0.0594x + 2.1296

R2 = 0.3328

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Total number born

Birt

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Birth weights on farms

Page 54: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

2004-2011: 1.1 pig extra * 50 g= 55 g; trend is almost double

Page 55: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Resultaten onderzoek fase 1

Gemiddelde technische resultaten per groep

Laag Hoog

Gem. worpnummer 3,63 3,35

% Eerste worpen 22 20

Gem. geboortegewicht (gram) 1228 1440

Gem. levendgeboren / worp 12,7 13,0

Gem. doodgeboren / worp 1,4 0,9

% Uitval tot spenen 13,2 8,7

Gem. aantal gespeend 11,1 11,8

Page 56: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

56

Seizoensinvloeden op geboortegewicht

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Maand

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65 gram

Page 57: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Invloed pariteit op geboortegewicht

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Variatie in geb. gew. Gem. geb. gew.

Page 58: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Invloed pariteit op bigoverleving

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Page 59: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Interesting remarks

• Sows housed in groups have piglets with heavier birth weights

BW Individual Group/ind Group

1.2 1 0 1

1.3 6 2 3

1.4 0 0 6

Page 60: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Group housing in gestationCorrected mean:

avg birthwtP-value # farmers

Yes 1.3878 0.24 12

No 1.3512 7

Raw data:

avg birthwtP-value # farmers

Yes 1.397 0.17 12

No 1.355 7

Page 61: Peri-natal survival of piglets understanding and genetics Lauren Christian Endowed Lecture Egbert F. Knol

Thank you for your attention