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Quantitative Methods What lies beyond?

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Quantitative Methods. What lies beyond?. What lies beyond?. General Linear Model. What does GLM do for us?. partitioning of variance and DF tests for whether x-variables matter statistical elimination best-fit equation showing how x-variables matter. What is general about GLM?. - PowerPoint PPT Presentation

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Page 1: Quantitative Methods

Quantitative Methods

What lies beyond?

Page 2: Quantitative Methods

What lies beyond?

General Linear Model

• categorical or continuous x-variables• main effects and interactions• any number of x-variables and interactions

• partitioning of variance and DF• tests for whether x-variables matter• statistical elimination• best-fit equation showing how x-variables matter

What is general about GLM?

What does GLM do for us?

Page 3: Quantitative Methods

What lies beyond?

General Linear Model

• linearity/additivity• Normality• homogeneity of variance• independence• a single y-variable

How is GLM not general?

Page 4: Quantitative Methods

What lies beyond?

Generalised Linear Model

• linearity/additivity• Normality• homogeneity of variance• independence• a single y-variable

The Generalised Linear Model relaxes

Page 5: Quantitative Methods

What lies beyond?

Generalised Linear Model

The Generalised Linear Model adds

• link function• variance function• choice for estimating or setting the ‘scale factor’

Page 6: Quantitative Methods

What lies beyond?

Generalised Linear Model

The Generalised Linear Model includes:

Link function Variance Function Name of model

Identity Normal GLMLogit Binomial Logistic RegressionLog Poisson Log-linear modelsInverse Exponential Survival analyses

Page 7: Quantitative Methods

What lies beyond?

General Linear Model

• linearity/additivity• Normality• homogeneity of variance• independence• a single y-variable

How is GLM not general?

Page 8: Quantitative Methods

What lies beyond?

Generalised Linear Model

• categorical or continuous x-variables• main effects and interactions• any number of x-variables and interactions

• partitioning of deviance and DF• tests for whether x-variables matter• statistical elimination• best-fit equation showing how x-variables matter

What is general about Generalised Linear Model?

What does Generalised Linear Model do for us?

Page 9: Quantitative Methods

What lies beyond?

General Linear Model

• linearity/additivity• Normality• homogeneity of variance• independence• a single y-variable

How is GLM not general?

Page 10: Quantitative Methods

What lies beyond?

General Linear Model

• linearity/additivity• Normality• homogeneity of variance• independence• a single y-variable

How is GLM not general?

Page 11: Quantitative Methods

What lies beyond?

Multivariate methods

• Principle components analysis• Factor analysis• Discriminant analysis• MANOVA• Cluster analysis / Numerical taxonomy

Page 12: Quantitative Methods
Page 13: Quantitative Methods
Page 14: Quantitative Methods
Page 15: Quantitative Methods

10.2 (principles of marginality), 10.4 (applications of marginality), 11.1 (calculate R2 or R2

adj), 5.3 (orthogonality)

Page 16: Quantitative Methods
Page 17: Quantitative Methods

9 (assumptions and model criticism)

Page 18: Quantitative Methods

9 (assumptions and model criticism)

Page 19: Quantitative Methods
Page 20: Quantitative Methods

4 (statistical elimination)

10.2 (marginality and types of SS) and 10.4 (examples)

Page 21: Quantitative Methods
Page 22: Quantitative Methods

4 (statistical elimination, legs example)

Page 23: Quantitative Methods
Page 24: Quantitative Methods

Last last words…

• Learn GLMs for the Biology course and finals• Be prepared to learn Generalised Linear Models for

more advanced problems• A chance to do an exam question in the practicals

What lies beyond?