searching for meaning: radiology image retrieval with arrs goldminer ® charles e. kahn jr., md, ms...

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Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Page 1: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner®

Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner®

Charles E. Kahn Jr., MD, MS

Medical College of WisconsinMilwaukee, Wisconsin, USA

Page 2: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

ARRS

American Roentgen Ray Society

Publisher of AJR

Annual meeting April 26 – May 1, 2009

Page 3: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

Google® Imagescirca 2006

Page 4: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 5: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

ARRS GoldMiner®

Image search engine Open access images and articles Built by and for radiologists Powered by a major radiology

organization Available freely to all

Page 6: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Overview

ARRS GoldMiner®

How it works Get the most for your search

New features Advanced search Spell check GoldMiner Global

What’s on the horizon

Page 7: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Search term

Page 8: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Click on the thumbnailto view the full-size original image

Click on the titleto link to the original article

Page 9: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Dynamically filter results by age, sex,

and imaging modality

Page 10: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

ARRS GoldMiner®

Image search engine Radiology images Peer-reviewed journals

Combines search strategies Keywords (text strings) Medical concepts

Filters search results Age, sex, and imaging modality

Page 11: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Concept-based Search

Semantic knowledge Lexical variants

“oesophagus” = “esophagus” = “esophageal” Abbreviations

“HCC” = “hepatocellular carcinoma” Synonyms

“renal calculi” = “kidney stones”

Powered by UMLS® Unified Medical Language System

Page 12: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Concept-based Search

GoldMiner understands relationships between concepts

For example: “gallstones” is a type of “gallbladder

disease” “osteosarcoma” is a “bone tumor”

Page 13: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 14: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 15: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 16: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Page 17: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

GoldMiner’s Software

Harvester A Web "robot" intelligently crawls journal web

sites to gather figures and their text captions

Indexer Discovers medical concepts in free-text figure

captions Indexes the figures to speed retrieval

Search engine Retrieves images to answer your search query

Page 18: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Image Library

7 core journals including AJR, Radiology, and RadioGraphics

250+ peer-reviewed journals Image collection grows weekly

Page 19: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Outstanding Performance

Fast retrieval Mean = 0.041 sec

Accurate search results High precision and recall (86%+) Image metadata (~85% accuracy)

Age, sex, imaging modality

Page 20: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Page 21: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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A “How-To” Guide

Keep it simple ! Use a search term that represents

A disease An imaging finding, or An anatomic feature

Filter your search results Limit images by age group, sex, and/or

imaging modality

Page 22: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

New Features

GoldMiner Spelling corrector Advanced search

Image Gallery GoldMiner Global

10 languages

Page 23: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Spelling Correction

Page 24: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Advanced Search

Combine up to 3 search queries e.g., “Lung metastases” and “colon

cancer”

Limit to core journals Search by age

Age group (“Child”) or specific range

Sex Imaging modalities

Page 25: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 26: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 27: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Image Gallery

Instantly add images to a web site All it takes is one line of HTML code!

GoldMiner “inlines” relevant images into web pages based on their content

Page 28: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

GoldMiner inserts up to four relevant images, based on the page’s title and subject

The caption pops up when your mouse hovers over an image; click on the image to view it at full size

GoldMiner® Image Gallery

at the CHORUS web site

(chorus.rad.mcw.edu)

Page 29: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

GoldMiner Global

Multi-lingual search engine

10 other languages

Uses MeSH Medical Subject

Headings

Arabic Chinese French German Italian Japanese Korean Portuguese Russian Spanish

Arabic Chinese French German Italian Japanese Korean Portuguese Russian Spanish

Page 30: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

العربية日本語

Deutsch

Español Русский中文

Português

Italiano

Français

A customized NLM web interface translates the query term into an English-language MeSH term

The ARRS GoldMiner® serversends a translation request; it uses the English-languagequery term to retrieve images.

Users can search for images using search terms in 10 languages other than English.

Page 31: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

Searching in Chinese for “Liver Cancer”

Searching in Chinese for “Liver Cancer”

“ ”肝癌

Page 32: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA
Page 33: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Coming Soon

Premium content ARRS Categorical Courses ARRS Case-based Review

Content-based image retrieval Imaging modality Find similar images

Point-of-care learning Category 1 CME

Page 34: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Premium Content

Page 35: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

Image Modality Classifier

Use visual info to detect modality 95% accuracy

Combine with existing text data

“CT”

Page 36: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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“Visual Search” for Images

Page 37: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Point of care learning “Just-in-time” knowledge

CME credits for clinically directed search

ARRS member benefit

Page 38: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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Point of Care Learning

Learning LogSearch Results

Page 39: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

goldminer.arrs.org

The ARRS GoldMiner® Team

Michael Bruno (Penn State / Hershey)

Susanna Lee (Harvard / MGH) Michael Richardson (U. Washington) Daniel Rubin (Stanford)

thanks to ... ARRS staff

Page 40: Searching for Meaning: Radiology Image Retrieval with ARRS GoldMiner ® Charles E. Kahn Jr., MD, MS Medical College of Wisconsin Milwaukee, Wisconsin, USA

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56+ CME credits Practical sonography Case-based review Subspecialty tracks

Great value Members $299