snap and span
DESCRIPTION
SNAP and SPAN. Barry Smith and Pierre Grenon University at Buffalo and Institute for Formal Ontology and Medical Information Science ( ifomis.de ) University of Leipzig. Formal Ontology. = domain-neutral Examples of categories: - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/1.jpg)
1
SNAP and SPANBarry Smith and Pierre Grenon
University at Buffaloand
Institute for Formal Ontology and Medical Information Science (ifomis.de)
University of Leipzig
![Page 2: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/2.jpg)
2
Formal Ontology
= domain-neutral
Examples of categories:
Substance, Process, Agent, Property, Relation, Location, Spatial Region
Part-of, Boundary-of
![Page 3: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/3.jpg)
3
Material Ontology
= regional or domain-specific ontology, e.g. GeO
Examples of categories:
River, Mountain, Country, Desert …
Resides-In, Is-to-the-West-of
![Page 4: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/4.jpg)
4
Realist Perspectivalism
There is a multiplicity of ontological perspectives on reality, all equally veridical and transparent to reality
vs. Reductionism: “Only my preferred perspective on reality is veridical”
![Page 5: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/5.jpg)
5
Realist Perspectivalism
Perspectivalism: all views are ontologically admissible.
Realist Perspectivalism: only those perspectives are admissible that are transparent to reality
![Page 6: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/6.jpg)
6
Need for different perspectives
Double counting:
3 apples on the table7 x 1016 molecules at spatial locations L1, L2 and L3
Not one ontology, but a multiplicity of complementary ontologies
Cf. Quantum mechanics: particle vs. wave ontologies
![Page 7: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/7.jpg)
7
Cardinal Perspectives
Formal vs. Material
Micro- vs. Meso- vs. Macro
SNAP vs. SPAN
![Page 8: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/8.jpg)
8
A Network of Domain Ontologies
BFO
BFO = Basic Formal Ontology
![Page 9: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/9.jpg)
9
A Network of Domain Ontologies
MedO
BFO
![Page 10: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/10.jpg)
10
A Network of Domain Ontologies
GeO
MedO
BFO
![Page 11: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/11.jpg)
11
A Network of Domain Ontologies
LexO
GeO
MedO
BFO
![Page 12: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/12.jpg)
12
A Network of Domain Ontologies
MilO LexO
GeO
MedO
BFO
![Page 13: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/13.jpg)
13
A Network of Domain Ontologies
EcO
MilO LexO
GeO
MedO
BFO
![Page 14: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/14.jpg)
14
Cardinal Perspectives
Formal vs. Material Ontologies
Granularity (Micro vs. Meso vs. Macro)
SNAP vs. SPAN
![Page 15: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/15.jpg)
15
Granular Partitions
![Page 16: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/16.jpg)
16
Ontological Zooming
![Page 17: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/17.jpg)
17
Ontological Zooming
folk geography
land survey
![Page 18: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/18.jpg)
18
Ontological Zooming
both are transparent partitions of one and the same reality
![Page 19: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/19.jpg)
19
Cardinal Perspectives
Formal vs. Material Ontologies
Granularity (Micro vs. Meso vs. Macro)
Time: SNAP vs. SPAN
![Page 20: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/20.jpg)
20
Substances and processes exist in time in different
ways
substance
t i m
e
process
![Page 21: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/21.jpg)
21
Snapshot vs. video
substance
t i m
e
process
![Page 22: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/22.jpg)
22
Endurants and perdurants
Substances and processesContinuants and occurrents
In preparing an inventory of realitywe keep track of these two different categories of entities in two different ways (stocks vs. flows)
![Page 23: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/23.jpg)
23
Endurants vs. perdurants
Endurants- have continuous existence in time- preserve their identity through change- exist in toto if they exist at all
Perdurants- have temporal parts- unfold themselves through time- exist only in their phases/stages
![Page 24: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/24.jpg)
24
Endurants vs. perdurants
Substances vs. their lives
![Page 25: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/25.jpg)
25
You are a substance
Your life is a process
You are 3-dimensionalYour life is 4-dimensional
![Page 26: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/26.jpg)
26
Substances do not have temporal parts
The first 5-minute phase of my existence is not a temporal part of me It is a temporal part of that complex process which is my life
![Page 27: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/27.jpg)
27
How do you know whether an entity endures or
perdures?
![Page 28: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/28.jpg)
28
SNAP vs. SPAN
1. SNAP: a SNAPshot ontology of endurants existing at a time
2. SPAN: a four-dimensionalist ontology of processes
![Page 29: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/29.jpg)
29
Three kinds of SNAP entities
1. Substances2. SPQR… entities3. Spatial regions,
Contexts, Niches
![Page 30: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/30.jpg)
30
SPQR… entities
States, powers, qualities, roles …
![Page 31: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/31.jpg)
31
Other SPQR… entities:
functions, dispositions, plans, shapes
SPQR… entities are all dependent on substances
relations
![Page 32: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/32.jpg)
32
Examples of simple SNAP ontologies 1
space
![Page 33: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/33.jpg)
33
Examples of simple SNAP ontologies 2
![Page 34: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/34.jpg)
34
Examples of simple SNAP ontologies 3
![Page 35: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/35.jpg)
35
each SNAP section through reality
includes everything which existsat the corresponding now
![Page 36: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/36.jpg)
36
Many SNAP Ontologies
t1
t3
t2
here time exists outside the ontology, as an index or time-stamp
![Page 37: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/37.jpg)
37
The SPAN Ontology
t i m e
![Page 38: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/38.jpg)
38
here time exists as part of the domain of the ontology
The SPAN ontology
![Page 39: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/39.jpg)
39t i m e
campaign
The SPAN ontology
![Page 40: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/40.jpg)
40
They are windows on just that portion of reality which is visible through the given ontology (… Pat Hayes …)
SNAP and SPAN ontologies are partial only
(Realist perspectivalism)
![Page 41: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/41.jpg)
41
SNAP: Entities existing in toto at a time
![Page 42: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/42.jpg)
42
Three kinds of SNAP entities
1. Substances2. SPQR… entities3. Spatial regions,
Contexts, Niches
![Page 43: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/43.jpg)
43
![Page 44: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/44.jpg)
44
![Page 45: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/45.jpg)
45
SNAP
![Page 46: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/46.jpg)
46
SPAN: Entities extended in time
SPANEntity extended in time
Portion of Spacetime
Fiat part of process *First phase of a clinical trial
Spacetime worm of 3 + Tdimensions
occupied by life of organism
Temporal interval *projection of organism’s life
onto temporal dimension
Aggregate of processes *Clinical trial
Process[±Relational]
Circulation of blood,secretion of hormones,course of disease, life
Processual Entity[Exists in space and time, unfolds
in time phase by phase]
Temporal boundary ofprocess *
onset of disease, death
![Page 47: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/47.jpg)
47
SPAN: Entities extended in time
![Page 48: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/48.jpg)
48
SPAN: Entities extended in time
![Page 49: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/49.jpg)
49
Rule: Respect Granularity
spatial region qualitysubstance
parts of spatial regions are always spatial regions
![Page 50: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/50.jpg)
50
Respect Granularity
spatial region qualitysubstance
parts of substances are always substances
![Page 51: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/51.jpg)
51
Respect Granularity
spatial region qualitysubstance
parts of qualities are always qualities
![Page 52: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/52.jpg)
52
Respect Granularity
process
parts of processes are always processes
![Page 53: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/53.jpg)
53
Relations crossing the SNAP/SPAN border are not
part-relations
John’s lifesubstance John
physiological processes
sustaining in existence
![Page 54: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/54.jpg)
54
Parts of processes (1)
c
c: boundary
a
a
a: scattered part
b
b: temporal slice
![Page 55: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/55.jpg)
55
Parts of processes (2)
a
a: sub-process
b
b: phase
![Page 56: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/56.jpg)
56
Relations between SNAP and SPAN
SNAP-entities participate in processes; they have lives, histories.
![Page 57: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/57.jpg)
57
SPQR… entities and their SPAN realizations
the expression of a functionthe exercise of a rolethe execution of a planthe realization of a dispositionthe application of a therapy
![Page 58: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/58.jpg)
58
SPQR… entities and their SPAN realizations
functionroleplandispositiontherapy
SNAP
![Page 59: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/59.jpg)
59
SPQR… entities and their SPAN realizations
expression exercise execution realization application
SPAN
![Page 60: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/60.jpg)
60
Temporal Co-Incidence
x
y
SNAP-t
At time t, colony of bacteria in the throat.
time
SPANMigration of a colony of bacteriafrom the mouth to the small intestine.
B
![Page 61: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/61.jpg)
61
Participation
x
y
substances x, y participate in process B
time
Bx
y
SNAP-ti.
time
SPAN
B
![Page 62: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/62.jpg)
62
Projections
proce
ss
material region spatial region
participants
spatio
-tempora
l region
SNAPti
SPAN
![Page 63: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/63.jpg)
63
SNAP-SPAN relations (3)
Ontological dependence.
Some forms of participation:
-initiation, termination
-creation, destruction
-sustenance, degradation
![Page 64: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/64.jpg)
64
Ontology for Geographical
Information Science
![Page 65: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/65.jpg)
65
GeO
![Page 66: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/66.jpg)
66
An adequate ontology of geography has to have those three components:
1. SNAP
2. FIELD
3. SPAN
![Page 67: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/67.jpg)
67
SNAP GeO
![Page 68: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/68.jpg)
68
An adequate ontology of geography has to have those three basic categories:
1. Geographical Objects
2. Geographical Attributes
3. Places, Niches, Environments
![Page 69: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/69.jpg)
69
FIELD GeO
![Page 70: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/70.jpg)
70
An adequate ontology of geography has to have those three categories:
1. Fields
2. Fields Attributes
3. Spatial Regions
![Page 71: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/71.jpg)
71
SPAN GeO
![Page 72: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/72.jpg)
72
An adequate ontology of geography has to have those two categories:
1. Processual Entities
2. Space-Time Worms
![Page 73: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/73.jpg)
73
Relations in GeO
Of course, all the Basic Formal Relations obtain here.
There are GeO specific relations or GeO specifics forms of Basic Formal Relations.
![Page 74: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/74.jpg)
74
Relations in GeO
Forms of geo-spatial location-orientation (east of, etc.)-field elements-geographical location (projection on Earth's surface, 2-D)-geo-spatial location (with
considerations of altitude, 3-D)
Relations defined based on participation in specific geographical processes.
![Page 75: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/75.jpg)
75
Geo Location
ground, 2d-location
underground, 3d-location
above ground, 3-d location
![Page 76: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/76.jpg)
76
Relations between SNAP and SPAN (and FIELD) in
GeO
![Page 77: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/77.jpg)
77
Geographical Changes
Some types of processes:
-Movements (location change)
-Substantial Change
-Property Change
![Page 78: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/78.jpg)
78
Movement
from location
x
ends
begins
mov
emen
t
to location
y
![Page 79: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/79.jpg)
79
begins
mov
emen
t
from location
x
to location
y
ends
Moving Outside
![Page 80: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/80.jpg)
80
Initiation
Destruction
![Page 81: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/81.jpg)
81
Creation
a process P
t1
a region of space R where P is ongoing
R
Snap-t1
![Page 82: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/82.jpg)
82
Creation
P
t1
R
Snap-t1
t2>t1
R
Snap-t2
P initiates a,a's birth at t2 a's life (overlaps P)
![Page 83: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/83.jpg)
83
Property change
![Page 84: SNAP and SPAN](https://reader035.vdocument.in/reader035/viewer/2022062802/56814548550346895db21697/html5/thumbnails/84.jpg)
84
Scenario