the probability of a chance or event is independent of any other chance or event. the probability of...
TRANSCRIPT
• The probability of a chance or event
is independent of any other chance
or event.
• The probability of two or more
events occurring together is equal to
the product of their individual
probabilities.
Laws of Probability
• Expressivity – the extent to which a phenotype shows in an individual in a population. E.g. how brown is hair color?
• Penetrance – the extent to which a phenotype is carried by members of a population
Expressivity & Penetrance
• Amniocentesis
• CVS - chorionic villus sampling
• Linkage maps/cytological maps
Analysis and Diagnosis
Mendel and
His Peas
A Look Into A Look Into GeneticsGenetics
http://www.accessexcellence.org/RC/AB/BC/Gregor_Mendel.php
http://en.wikipedia.org/wiki/Image:NCI_peas_in_pod.jpg
• Gregor Mendel - 1800’s
• Austrian (modern Czech) Monk
• Observed “traits” or “factors” in pea
plants in his monastery garden
• Kept good records
• Never published...
Gregor Mendel:Classical Genetics
• Traits - logical, probability terms used
by Mendel to describe his work.
• Allele - one of two (or more)
expressions of a trait in a trait pair.
• Gene - section of DNA responsible for
the translation of a protein (enzyme)
Traits, factors, alleles, genes...
• Round or wrinkled peas
• Sweet or starchy peas
• Green or yellow peas
• Inflated or wrinkled pods
• Green or gray pods
• Tall or short plants
• Terminal or axial flowers
Traits of Peas….Mmm
Peas – True Breeding
Round pea seed
wrinkled pea seed
Round pea seeds produce round plantswrinkled pea seeds produce wrinkled plants
Crossing Peas
x • Mendel crossed a
purebred round with
a purebred wrinkled
pea, thinking that
the offspring would
be a blend of the
two traits...
Crossing Peas
x • Instead he found that
the first offspring
generation was all
round…
• This led him to assert
that round was
dominant to wrinkled.
Crossing Peas
x • When he allowed the
first offspring
generation to self-
pollinate..
• …the second
offspring generation
showed both traits.
Naming the generations
x P1 Parental generation
F1 First filial
generation
F2 Second filial generation
The Genes that Cause the Traits...
xRR
Rr
rr
RR Rr rrRr
R
R
r rRr Rr
RrRr
R
r
R rRR Rr
rrRr
• Genotype - letters or symbols for
the genes involved: RR, Rr, rr; TT,
Tt, tt
• Phenotype - adjectives that describe
the trait: round, wrinkled, tall, short
Genotype and Phenotype
Genotype and Phenotype
• The genotype causes the
phenotype…
• The phenotype is the expression of
the genotype...
• Homozygous (purebred) - both
alleles in the allele pair are identical
• Heterozygous (“hybrid”) - the two
alleles in the allele pair are different
Purebreds and Hybrids
Another set of alleles...
SHORTPLANT
TALLPLANT
Cross a pure bred tall plantwith a pure bred short plant...
T = tall genet = short gene
• Just as in the P1 cross of
purebred dominant with
purebred wrinkled…
• All the F1 individuals will
show the dominant trait
(and heterozygous
genotype)
P1 Cross: Homozygous Tall with Homozygous Short...
TT ttx
T
T
t t
Tt Tt
TtTt
Tt Ttx
T
t
T t
TT Tt
ttTt
• Now the F1 can cross
• And produce the
characteristic 3:1 ratio
of phenotypes…
• (and 1:2:1 ratio of
genotypes…)
F1 Cross: Self-pollination of hybrid
• Because the F1 (self-pollinations)
crosses are ones between hybrids
for one allele, they are often called
monohybrid crosses.
• It is an excellent example of
classical genetics.
Monohybrid Cross
Monohybrid Cross
• Monohybrid Crosses show the
segregation of two alleles in the
same allele pair.
• Monohybrid cross shows the
segregation of alleles of the
same allele pair into different
gametes...
• Dihybrid cross ?
More Classical Genetics
Green - Yellow Pea
GREENx
GREEN
YELLOW x YELLOWx
ALL YELLOWOFFSPRING
ALL GREENOFFSPRING
x
Green/yellow crossesYELLOW x GREEN
ALL YELLOWOFFSPRING
(SELF-POLLINATION)
x
3 TO 1 RATIO:YELLOW TO GREEN
G/y Phenotypes/GenotypesYELLOW x GREEN
ALL YELLOWOFFSPRING
(SELF-POLLINATION)
x
3 TO 1 RATIO:YELLOW TO GREEN
yyYY
Yy
YY,2Yy,yy
G/y Punnett SquaresYY yyx
Y
Y
y yYy Yy
YyYy
Yy Yyx
Y
y
Y yYY Yy
yyYy
PHENOTYPE RATIOS3 yellow: 1greenGENOTYPE RATIOS1YY:2Yy:1yy
Dihybrid CrossCross a homozygous round yellow pea plant with a homozygous wrinkled green plant.
Then cross the F1 (self-pollination).
What are the genotypes?
P1 CrossRRYY x rryyP CROSS:
GAMETES: RY ry
RY
RY
ry ryRrYy RrYy
RrYy RrYy
F1 Cross
RrYy x RrYyF1 CROSS:
GAMETES: RY, Ry, rY, ry
RrYy Dihybrid CrossRY Ry
RY
Ry
rY
ry
ryrY
RRYY RRYy
RRyyRRYy
RrYY RrYy
RryyRrYy
RrYy
Rryy
rrYy
rryy
RrYY
RrYy
rrYY
rrYy
RY Ry
RY
Ry
RRYY RRYy
RRyyRRYy
rY
ry
RrYY RrYy
RryyRrYy
ry
RrYy
Rryy
rrYy
rryy
rY
RrYY
RrYy
rrYY
rrYy
RrYy Dihybrid Cross
Phenotype RatiosRY Ry
RY
Ry
rY
ry
ryrY
Round Yellow
Round Green
Wrinkled Yellow
Wrinkled Green
9
3
3
1
9:3:3:1
Genetic Recombination
R tTr•This is a diploid cell
right after mitosis.
•Note that there are 4 paired chromosomes
•Each chromosome has only one chromatid
RR ttTTrr
S-phase chromosomes
•After S-phase (i.e. DNA synthesis)…
•There are still only 4 chromosomes…
•Each chromosome now has two chromatids.
Metaphase-1
ORRR
ttTT
rr rr
TT tt
RR
•Because the chromosomes synapse at random on the metaphase plate..•Two different combinations are possible
with two pairs of chromosomes.
Anaphase-1
POSSIBLEANAPHASE 1
ARRANGEMENTS
ORRR
ttTT
rr RR
ttTT
rr
POSSIBLEMETAPH 2ARRANGE-
MENTS
R
T
r
t
R
r R R
r r
t
T T T
tt•…and this means more varied recom-
binations are possible.
Metaphase-2
Anaphase-2
ANAPHASE 2AND
TELOPHASE 2
R
T
r
t
R
r R R
r r
t
T T T
tt
Gametes
ALLPOSSIBLE GAMETES
2 CHROMOSOMESEACH
RT RT rT rT
Rtrtrt Rt