Vocabulary Knowledge

Center Update

VCDE Workspace Jan 20, 2011

Agenda

• Tools Update• Outreach

– Conferences and customers• Knowledge Base• Projects• VKC “Conferences table”• Questions/Feedback

Tools UpdateLatest Releases

• LexEVS 6.0 (Jan 2011)– CTS 2

• LexGrid model changes• Pre-CTS2 API implementation• Versioning and value set• Authoring APIs• Query APIs• Associations/Mappings enhancements

– OWL/RDF export– Filtered XML export

Tools UpdateLatest Releases

• LexWiki 2.0– Latest version of MediaWiki and relevant extensions

• Inclusion of Semantic Bundle– Easy installation for multiple platforms and complex extensions

• LexWiki Publisher 1.0– Take LexEVS content and “load” into LexWiki– 2.0 is “in the works” which opens this to any terminology

We are just now starting the move to

Jira for issue tracking.

OutreachConferences

Past conferences• Arch-VCDE (several)• ISMB 2010 (Jiang)• CTMS F2F (Freimuth)• caBIG Annual Meeting (several)• 29th International Conference on Conceptual Modeling

(Freimuth)• ISWC (Tao)• AMIA Annual Symposium (Freimuth, Tao, Jiang)• HL7 CTS 2 meetings (Solbrig, Stancl)Future conferences• AMIA 2011 TBI/CRI Joint Summit (Freimuth, Tao, Jiang) Future

Past

OutreachCustomers

• HSDB federation/OSU– Selection of value set authoring and query

• NICHD– Investigating CSHARE-like authoring

• Dana-Farber– Rewrite app using caBIG terminology tools

• Murcia University, Spain– Creating simplified term search tool on LexEVS

OutreachCustomers (continued)

• Center for Disease Control (CDC)– Brainstorming about authoring tools in their suite and

LexEVS• University of Michigan Comprehensive Cancer

Center– Creating a semantics roadmap for themselves

• Universidad del Valle, Cali-Colombia – Interest in OWL export fo ICD-9 from LexEVS

OutreachCustomers (continued)

• NUST School of Electrical Engineering and Computer Science (SEECS)– Install help, map their own terminology to SNOMED

• openEHR– Loading SNOMED

• NCI caMOD– Migrating the EVSTree extension

• TRANSFoRm (European Health Care)– Investigation choices for terminolgy storage and

services

Knowledge BaseExpanding the semantic universe

• Protege 4.1 build an ontology video• Terminology 101 paper• Semantic Media Wiki instructional pages• NCIm and NCIt history published• ICD 10 information• LexEVS widget library• WikEd tool demonstration video• LexEVS 6.0 structure and documentation• Revamp LexEVS install instructions, 508 and more• Semantic Web Technology Interest Group (SemTIG)

ProjectsNow and on the horizon

• Tool roadmaps• Migration to Jira• Removal of LexGrid.org• Term Browsers - install instructions• LexEVS OWL/RDF export tutorial and video• LexWiki Publisher 2.0 (configurable terminology)

VKCConference table

• Scroll down on the main page just a bit

Today?

Later, go here:

Follow us on Twitter http://twitter.com/VocabKC

https://cabig-kc.nci.nih.gov/Vocab/forums/

http://cabig-kc.nci.nih.gov/Vocab/KC

VocabKC@mayo.edu

Questions and Feedback

Questions and Feedback

Today?

Later, go here:

Follow us on Twitter http://twitter.com/VocabKC

https://cabig-kc.nci.nih.gov/Vocab/forums/

http://cabig-kc.nci.nih.gov/Vocab/KC

VocabKC@mayo.edu