class 1_2014

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    THE HOMEWORK

    Show me your nasty molecule

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    THE HOMEWORK

    What makes it environmentally

    problematic?

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    THE HOMEWORK

    What properties do you

    remember from organic andp-chem?

    If any

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    THE BOXES, THE ARROWS, TIME and SPACE

    What is a pollutant?

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    THE BOXES, THE ARROWS, TIME and SPACE

    What is a pollutant?

    Generally, any substance

    introduced into the environmentthat adversely affects the

    usefulness of a resource or the

    health of humans, animals, or

    ecosystems.

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    THE BOXES, THE ARROWS, TIME and SPACE

    What makes a substance a

    pollutant?

    Generally, any substance

    introduced into the environmentthat adversely affects the

    usefulness of a resource or the

    health of humans, animals, or

    ecosystems that is persistent,

    and easily transportable.

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    THE BOXES, THE ARROWS, TIME and SPACE

    Degradation (chemical)Photolysis

    Hydrolysis

    Redox

    Biodegradation

    Cx

    Fin Fout

    CinCout

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    THE BOXES, THE ARROWS, TIME and SPACE

    Dissipation (physical)Volatilization

    Partitioning

    Cx

    Fin Fout

    CinCout

    Cy

    Abiotic

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    THE BOXES, THE ARROWS, TIME and SPACE

    Dissipation (physical)Volatilization

    Partitioning

    Cx

    Fin Fout

    CinCout

    Cy

    Cz

    Abiotic

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    THE BOXES, THE ARROWS, TIME and SPACE

    Dissipation (physical)Partitioning

    Cx

    Fin Fout

    CinCout

    Cw

    Cy

    Cz

    Biotic

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    THE BOXES, THE ARROWS, TIME and SPACE

    Dissipation (physical)PartitioningBioccumulation

    Bioconcentration

    Biomagnification

    C0.1

    Fin Fout

    CinCout

    C1

    Cy

    Cz

    Biotic

    C10

    C1000

    C10000

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    A NEVER ENDING CIRCLE

    AIR WATER SOIL PLANTS ANIMALS

    NON-CONTAMINATED COMPARTMENTS

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    THE BOXES, THE ARROWS, TIME and SPACE

    REACTIONS AIR WATER SOILS PLANTS ANIMALS

    Hydrolysis Y Y Y Y Y

    Phototransformation Y Y Y Y Y

    Dissociation Y Y Y Y Y

    Solubility Y Y Y Y Y

    Sorption Y Y Y Y Y

    Biodegradation Y Y Y Y YMetabolism N N N Y Y

    Accumulation N N Y N N

    Bioaccumulation N N N Y Y

    Volatilization Y Y Y N N

    Respiration N N N Y Y

    Excretion N N N N Y

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    The most toxic compound

    ever known to manDioxin

    2,3,7,8-tetrachlorodibenzo[b,e][1,4]dioxin (TCDD)

    has a reported LD50 of 0.045 mg of dioxin/kg of body mass for rats.

    (LD50 is the concentration expected to kill half a given population.)

    Byproduct of synthesis of chlorophenols

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    Some compounds were better!

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    DDT, DDD and DDE: environmental legacy

    Rappolt, RT (1973). "Use of oral DDT in three human barbiturate intoxications: hepatic enzyme

    induction by reciprocal detoxicants". Clin Toxicol 6 (2): 147-51

    Paul Hermann Mller won the 1948 Nobel Prize in Physiology or Medicine for his 1939 discovery ofDDT as an insecticide useful in the control of malaria, yellow fever and many other insect-vector

    diseases.

    Cl Cl

    ClClCl

    Cl Cl

    HClCl

    Cl Cl

    ClCl

    DDT

    DDD

    DDE

    DDMU, DDA, DBP

    p,p-DDT

    +

    o,p-DDT

    SOIL

    SEDIMENT

    ORGANISMS

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    DDT, DDD and DDE: environmental legacy

    Rachel Carson (1962)

    Silent Spring DDT

    world-wide distribution

    accumulating in organisms

    ClCl

    Cl

    Cl Cl

    2,2-Bis(p-chlorophenyl)-1,1,1-trichloroethane

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    k

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    Love Canal (1976)

    Hooker Chemical buriedwastes in canal

    residential construction on

    site

    chlorinated hydrocarbons

    seeping into homes, schools

    first large-scale EPA

    intervention

    led to CERCLA (Superfund)

    Organic Contaminants: environmental legacy

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    Woburn, MA (1980s)

    TCE

    wide-spread in groundwater disputed source

    suspected to cause cancer

    (leukemia)

    A Civil Action

    Jonathan Harr (1995)

    Cl

    Cl

    Cl

    H

    Organic Contaminants: environmental legacy

    TETRACHLOROETHYLENE

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    Organic Contaminants: how do we know we did it?

    biology.queensu.ca/~pearl/taste/tpics/core.jpg

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    Organic Contaminants: BOXES AND ARROWS

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    Organic Contaminants: BOXES AND ARROWS

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    OUR GOALS?

    Can we evaluate everycompound for every

    compartment???

    The book is 1313 pages long!

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    Analytical capabilities

    Low concentrations

    Specific compounds

    Positive identification

    No metabolites

    Lessons from the past: almost everything at the same time

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    Different structure causesdifferent toxicity

    reactivity

    Partitioning

    If you are not planar or largerthan 10A not that bad!

    Quantitative structure-activityrelationship (QSAR) is theprocess by which chemicalstructure is quantitativelycorrelated with a well defined

    process, such as biologicalactivity or chemical reactivity

    Cl

    Cl

    Cl

    Cl

    O

    O Cl

    O

    O

    Cl Cl

    Cl

    Cl

    Cl

    O

    O

    Cl

    Cl

    > 1 g kg-1 >0.1 g kg-1 0.00004 g kg-1

    acute toxicity (LD50 for rats)

    Same family different isomers?

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    Different structure

    causes different toxicity

    reactivity

    partitioning

    H3C

    H2C

    C

    H2

    H2C

    Cl

    H2C

    CH

    H3C

    Cl

    H3C

    C Cl

    CH3

    H3C

    CH3

    ~ 1 yr ~ 40 d ~ 30 s

    degradation (hydrolysis half-life, pH 7)

    Same family different isomers?

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    Different structure

    causes different toxicity

    reactivity

    partitioning Cl

    Cl Cl

    Cl

    OH

    Cl

    Cl

    Cl

    Cl

    OH

    Cl

    Cl

    Cl

    Cl

    OH

    pKa: 5.04 5.40 6.35

    Kp: 10 L kg-1 20 L kg-1 180 L kg-1

    sorption to river sediments at pH 7

    Same family different isomers?

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    Simplify to box models

    air water

    suspended matter

    soil and sediment organisms

    etc.

    Remember the details dont simplify if simplification

    underestimates an important

    process

    Value Engineering make your li fe easier

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    PUTTING YOUR NECK ON THE LINE

    http://www.youtube.com/watch?v=z4lijvIjpRw